Experiment set3IT031 for Pseudomonas syringae pv. syringae B728a

Compare to:

epiphytic; Green bean

200 most important genes:

  gene name fitness t score description  
Psyr_4581 -6.1 -3.4 anthranilate synthase, component II compare
Psyr_0033 -4.7 -3.2 tryptophan synthase, alpha chain compare
Psyr_1663 -4.6 -6.4 phosphoribosylanthranilate isomerase compare
Psyr_4609 -4.1 -17.5 anthranilate synthase, component I compare
Psyr_0034 -3.9 -6.0 tryptophan synthase, beta chain compare
Psyr_4893 -3.7 -1.7 imidazole glycerol phosphate synthase subunit hisF compare
Psyr_4852 -3.7 -9.2 D-3-phosphoglycerate dehydrogenase compare
Psyr_3174 -3.6 -6.3 uroporphyrinogen-III C-methyltransferase / precorrin-2 dehydrogenase compare
Psyr_4407 -3.6 -4.2 phosphoribosylamine--glycine ligase compare
Psyr_0531 -3.5 -2.4 LmbE-like protein compare
Psyr_4369 -3.4 -7.3 glutamate-5-semialdehyde dehydrogenase compare
Psyr_0557 -3.4 -6.2 phosphoserine phosphatase compare
Psyr_4270 -3.3 -7.6 serine hydroxymethyltransferase compare
Psyr_0831 -3.3 -3.9 Two-component response regulator CbrB compare
Psyr_3805 -3.2 -3.6 hypothetical protein compare
Psyr_1668 -3.2 -8.7 amidophosphoribosyltransferase compare
Psyr_2462 -3.1 -5.1 Nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like:Nitrite and sulphite reductase 4Fe-4S region compare
Psyr_1410 -3.1 -6.5 Holliday junction DNA helicase RuvB compare
Psyr_3620 -3.0 -1.9 hypothetical protein compare
Psyr_3208 -2.9 -3.4 NADH dehydrogenase subunit M compare
Psyr_3008 -2.7 -6.4 Undecaprenyl-diphosphatase compare
Psyr_0529 -2.7 -5.5 Glycosyl transferase, group 1 compare
Psyr_0917 -2.7 -7.8 ABC-2 compare
Psyr_3432 -2.7 -2.9 MotA/TolQ/ExbB proton channel compare
Psyr_4684 -2.7 -3.4 biotin synthesis protein BioC compare
Psyr_4808 -2.6 -2.4 conserved hypothetical protein compare
Psyr_2980 -2.5 -5.1 UDP-glucose pyrophosphorylase compare
Psyr_2461 -2.5 -2.7 Uncharacterized conserved protein UCP030820 compare
Psyr_4686 -2.5 -6.3 8-amino-7-oxononanoate synthase compare
Psyr_5065 -2.5 -8.8 ATP-dependent DNA helicase UvrD compare
Psyr_0378 -2.4 -9.5 Glycosyl transferase, family 2 compare
Psyr_1613 -2.4 -4.3 septum site-determining protein MinC compare
Psyr_0454 -2.4 -6.6 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme compare
Psyr_0846 -2.4 -8.2 acetolactate synthase, large subunit compare
Psyr_0377 -2.3 -7.7 Periplasmic glucan biosynthesis protein, MdoG compare
Psyr_1408 -2.3 -3.1 Holliday junction endonuclease RuvC compare
Psyr_3179 -2.2 -3.3 DNA translocase FtsK compare
Psyr_1269 -2.2 -4.4 phosphoribosylformylglycinamidine synthase compare
Psyr_0827 -2.1 -3.9 pantothenate synthetase compare
Psyr_1373 -2.1 -3.4 Peptidoglycan-binding LysM:Peptidase M23B compare
Psyr_0918 -2.1 -10.5 ABC transporter compare
Psyr_4512 -2.1 -6.7 putative phage-related protein compare
Psyr_4897 -2.1 -3.1 imidazoleglycerol-phosphate dehydratase compare
Psyr_0294 -2.1 -5.7 Exopolyphosphatase compare
Psyr_3198 -2.0 -3.1 NADH dehydrogenase subunit B compare
Psyr_4830 -2.0 -1.9 Binding-protein-dependent transport systems inner membrane component compare
Psyr_0826 -2.0 -6.7 glucose-6-phosphate isomerase compare
Psyr_3202 -1.9 -2.3 NADH dehydrogenase subunit G compare
Psyr_3090 -1.9 -2.8 hypothetical protein compare
Psyr_3289 -1.9 -4.6 3-ketoacyl-CoA thiolase compare
Psyr_1247 -1.9 -2.7 conserved hypothetical protein compare
Psyr_4127 -1.9 -3.8 S23 ribosomal compare
Psyr_4895 -1.9 -3.1 conserved hypothetical protein compare
Psyr_0847 -1.9 -5.5 acetolactate synthase, small subunit compare
Psyr_3281 -1.9 -2.0 Glycoside hydrolase, family 3, N-terminal compare
Psyr_0976 -1.8 -4.6 Malate:quinone-oxidoreductase compare
Psyr_4203 -1.8 -2.1 SsrA-binding protein compare
Psyr_4687 -1.8 -6.7 biotin synthase compare
Psyr_0704 -1.8 -4.5 glutamate 5-kinase compare
Psyr_4991 -1.8 -2.4 hypothetical protein compare
Psyr_3193 -1.7 -2.0 Transcription factor jumonji, jmjC compare
Psyr_3684 -1.7 -3.2 NLP/P60 compare
Psyr_3691 -1.7 -5.0 conserved hypothetical protein compare
Psyr_4018 -1.7 -5.9 Formyltetrahydrofolate deformylase compare
Psyr_5132 -1.7 -2.7 Glucose-inhibited division protein A subfamily compare
Psyr_3567 -1.7 -3.3 L-arginine ABC transporter ATP-binding protein / L-ornithine ABC transporter ATP-binding protein compare
Psyr_1277 -1.7 -1.7 formate-dependent phosphoribosylglycinamide formyltransferase compare
Psyr_0167 -1.6 -2.0 hypothetical protein compare
Psyr_1378 -1.6 -2.0 RecA protein compare
Psyr_0081 -1.6 -1.4 ABC transporter compare
Psyr_3581 -1.6 -4.6 ribosomal large subunit pseudouridine synthase B compare
Psyr_0469 -1.6 -6.0 dihydroxyacid dehydratase compare
Psyr_0411 -1.6 -10.0 glutamate synthase (NADPH) large subunit compare
Psyr_0848 -1.5 -5.5 ketol-acid reductoisomerase compare
Psyr_0832 -1.5 -5.9 Two-component sensor kinase CbrA compare
Psyr_0532 -1.5 -3.7 conserved hypothetical protein compare
Psyr_4627 -1.5 -1.4 dimethyladenosine transferase compare
Psyr_4580 -1.5 -2.0 anthranilate phosphoribosyltransferase compare
Psyr_2386 -1.5 -1.8 hypothetical protein compare
Psyr_0983 -1.4 -4.5 Protein of unknown function DUF159 compare
Psyr_3199 -1.4 -2.2 NADH dehydrogenase subunit D / NADH dehydrogenase subunit C compare
Psyr_3886 -1.4 -1.7 methionyl-tRNA synthetase compare
Psyr_3290 -1.4 -2.7 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase compare
Psyr_4158 -1.4 -6.6 conserved hypothetical protein compare
Psyr_0473 -1.4 -5.1 Methionine biosynthesis MetW compare
Psyr_1747 -1.4 -3.2 ATP-dependent Clp protease proteolytic subunit ClpP compare
Psyr_4126 -1.4 -6.7 adenylylsulfate kinase / sulfate adenylyltransferase subunit 1 compare
Psyr_4294 -1.4 -2.6 Histone deacetylase family protein compare
Psyr_0259 -1.3 -2.2 Osmolarity sensor protein envZ compare
Psyr_0811 -1.3 -4.1 Integral membrane protein TerC compare
Psyr_4874 -1.3 -2.1 ABC transporter compare
Psyr_0541 -1.3 -1.7 Small multidrug resistance protein compare
Psyr_4736 -1.3 -1.7 conserved hypothetical protein compare
Psyr_1581 -1.3 -2.8 conserved hypothetical protein compare
Psyr_4362 -1.3 -3.0 Rare lipoprotein A compare
Psyr_0923 -1.3 -4.1 hypothetical protein compare
Psyr_4894 -1.3 -4.6 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
Psyr_2190 -1.3 -2.5 NADH:flavin oxidoreductase/NADH oxidase compare
Psyr_1780 -1.3 -1.3 transcriptional regulator, TetR family compare
Psyr_4579 -1.3 -4.0 indole-3-glycerol phosphate synthase compare
Psyr_2808 -1.3 -1.9 hypothetical protein compare
Psyr_0487 -1.3 -2.6 glutathione synthase compare
Psyr_4681 -1.3 -5.9 Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region compare
Psyr_4070 -1.2 -2.9 Response regulator receiver:Transcriptional regulatory protein, C-terminal compare
Psyr_1401 -1.2 -4.2 Histidine triad (HIT) protein compare
Psyr_4144 -1.2 -1.3 Protein of unknown function DUF1239 compare
Psyr_5072 -1.2 -1.2 Cobalamin synthesis protein/P47K:Cobalamin synthesis protein/P47K compare
Psyr_4842 -1.2 -3.5 Phosphoenolpyruvate-protein phosphotransferase compare
Psyr_2143 -1.2 -2.0 delta1-piperideine 2-carboxylate reductase compare
Psyr_4860 -1.2 -1.0 Integrase, catalytic region compare
Psyr_4622 -1.2 -2.0 Nucleotidyl transferase compare
Psyr_5129 -1.2 -2.3 chromosome segregation DNA-binding protein compare
Psyr_1984 -1.2 -2.5 3-isopropylmalate dehydratase, small subunit compare
Psyr_3395 -1.2 -2.8 FlhB domain protein compare
Psyr_3419 -1.2 -3.1 4Fe-4S ferredoxin, iron-sulfur binding protein compare
Psyr_3673 -1.2 -1.6 Phosphoglycerate/bisphosphoglycerate mutase compare
Psyr_3315 -1.2 -1.3 conserved hypothetical protein compare
Psyr_0179 -1.2 -1.3 Protein of unknown function DUF1289 compare
Psyr_2223 -1.1 -1.7 sarcosine oxidase, delta subunit compare
Psyr_3597 -1.1 -1.2 ABC transporter compare
Psyr_1094 -1.1 -1.9 cold-shock DNA-binding protein family compare
Psyr_4887 -1.1 -5.8 Peptidase S41A, C-terminal protease compare
Psyr_0919 -1.1 -6.0 Chromosome segregation ATPase-like protein compare
Psyr_0402 -1.1 -8.0 Peptidoglycan glycosyltransferase compare
Psyr_0534 -1.1 -6.2 membrane protein, putative compare
Psyr_3675 -1.1 -1.6 adenosylcobinamide kinase compare
Psyr_0025 -1.1 -2.2 shikimate dehydrogenase compare
Psyr_4132 -1.1 -5.0 histidinol phosphate aminotransferase apoenzyme compare
Psyr_3638 -1.1 -2.9 UDP-glucose 4-epimerase, putative compare
Psyr_2984 -1.1 -2.3 conserved hypothetical protein compare
Psyr_1614 -1.1 -1.7 lipid A biosynthesis acyltransferase compare
Psyr_3667 -1.1 -1.8 conserved hypothetical protein compare
Psyr_0947 -1.1 -4.2 TPR repeat protein:TPR repeat protein compare
Psyr_2087 -1.1 -3.8 aconitase / 2-methylcitrate dehydratase (trans-methylaconitate-forming) compare
Psyr_4567 -1.1 -3.3 Protein of unknown function UPF0075 compare
Psyr_4896 -1.1 -4.1 imidazole glycerol phosphate synthase subunit hisH compare
Psyr_1573 -1.1 -2.9 cyclic nucleotide-binding protein compare
Psyr_1953 -1.1 -1.4 conserved hypothetical protein compare
Psyr_4454 -1.1 -2.5 HupE/UreJ protein compare
Psyr_1807 -1.1 -2.2 Allantoicase compare
Psyr_1802 -1.1 -1.1 transcriptional regulator, AsnC family compare
Psyr_1998 -1.1 -3.1 lipoprotein, putative compare
Psyr_4300 -1.1 -2.0 DNA polymerase III, epsilon subunit compare
Psyr_4902 -1.1 -1.8 Protein of unknown function DUF495 compare
Psyr_0475 -1.0 -2.3 Protein of unknown function YGGT compare
Psyr_3637 -1.0 -5.3 Glycosyl transferase, family 4 compare
Psyr_4116 -1.0 -1.4 Transport-associated protein compare
Psyr_4415 -1.0 -4.2 cobalt-factor II C20-methyltransferase / precorrin-2 C20-methyltransferase compare
Psyr_0044 -1.0 -0.8 transferase hexapeptide repeat protein compare
Psyr_3644 -1.0 -2.7 prephenate dehydrogenase compare
Psyr_0201 -1.0 -3.7 ATP-dependent DNA helicase RecG compare
Psyr_0920 -1.0 -7.1 Glycosyl transferase, group 1 compare
Psyr_3793 -1.0 -2.4 Response regulator receiver:Transcriptional regulatory protein, C-terminal compare
Psyr_1650 -1.0 -1.0 aminodeoxychorismate lyase apoprotein compare
Psyr_4414 -1.0 -2.6 precorrin-3 methyltransferase compare
Psyr_4754 -1.0 -1.4 16S rRNA m(2)G-966 methyltransferase compare
Psyr_0630 -1.0 -3.6 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase compare
Psyr_0263 -1.0 -1.7 Two-component response regulator AlgB compare
Psyr_0915 -1.0 -4.7 NAD-dependent epimerase/dehydratase compare
Psyr_0769 -1.0 -2.5 conserved hypothetical membrane-anchored protein compare
Psyr_4078 -1.0 -5.4 AmpG-related permease compare
Psyr_4683 -1.0 -1.9 dethiobiotin synthase compare
Psyr_5133 -1.0 -2.7 tRNA modification GTPase trmE compare
Psyr_2201 -1.0 -2.2 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family compare
Psyr_4623 -1.0 -4.3 Aminoglycoside phosphotransferase compare
Psyr_4498 -0.9 -1.7 outer membrane transport energization protein ExbD compare
Psyr_3601 -0.9 -1.4 conserved hypothetical protein compare
Psyr_1748 -0.9 -2.6 ATP-dependent Clp protease ATP-binding subunit ClpX compare
Psyr_3466 -0.9 -1.5 Flagellin, C-terminal:Flagellin, N-terminal compare
Psyr_0386 -0.9 -2.5 phosphoribosyl-AMP cyclohydrolase compare
Psyr_2244 -0.9 -1.7 DNA topoisomerase III compare
Psyr_3701 -0.9 -1.7 thioredoxin, putative compare
Psyr_1350 -0.9 -1.7 site-2 protease, Metallo peptidase, MEROPS family M50B compare
Psyr_0635 -0.9 -2.2 MaoC-like dehydratase compare
Psyr_2927 -0.9 -1.9 transcriptional regulator, TetR family compare
Psyr_3429 -0.9 -1.5 CheW-like protein compare
Psyr_0579 -0.9 -5.0 RNAse R compare
Psyr_0303 -0.9 -1.9 Ferredoxin:Oxidoreductase FAD/NAD(P)-binding protein compare
Psyr_1880 -0.9 -3.3 Cytochrome c, class I compare
Psyr_1973 -0.9 -2.0 Aspartate transaminase compare
Psyr_4143 -0.9 -1.7 HAD-superfamily hydrolase, subfamily IIIA:Phosphatase YrbI compare
Psyr_2344 -0.9 -2.2 CDS compare
Psyr_3337 -0.9 -1.8 gluconate kinase, SKI family compare
Psyr_1250 -0.9 -2.1 conserved hypothetical protein compare
Psyr_3258 -0.9 -2.2 conserved hypothetical protein compare
Psyr_0214 -0.9 -1.4 conserved hypothetical protein compare
Psyr_0464 -0.9 -1.5 hypothetical protein compare
Psyr_4989 -0.9 -1.6 hypothetical protein compare
Psyr_0474 -0.9 -4.6 homoserine O-acetyltransferase compare
Psyr_1140 -0.9 -1.8 Disulfide bond formation protein DsbB compare
Psyr_3636 -0.9 -5.0 Polysaccharide biosynthesis protein CapD compare
Psyr_4408 -0.9 -4.4 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Histidine kinase:Histidine kinase compare
Psyr_4133 -0.9 -4.6 histidinol dehydrogenase compare
Psyr_1547 -0.9 -2.6 glycine cleavage system transcriptional repressor compare
Psyr_2637 -0.9 -2.6 FAD dependent oxidoreductase compare
Psyr_2737 -0.9 -2.5 hypothetical protein compare
Psyr_4100 -0.9 -3.0 D-alanine--D-alanine ligase compare
Psyr_4062 -0.9 -1.6 Pyridoxamine 5'-phosphate oxidase-related protein compare
Psyr_0014 -0.9 -2.0 lipid A biosynthesis acyltransferase compare
Psyr_0734 -0.9 -2.7 Protein of unknown function DUF159 compare


Specific Phenotypes

For 2 genes in this experiment