Experiment set3IT028 for Caulobacter crescentus NA1000

Compare to:

PYE with Cisplatin 0.005 mg/ml

200 most detrimental genes:

  gene name fitness t score description  
CCNA_01242 +3.0 21.9 amino acid permease compare
CCNA_01815 +2.9 20.7 nitrogen assimilation regulatory protein NtrC compare
CCNA_01826 +2.4 14.1 vitamin B12 receptor compare
CCNA_01780 +2.3 16.0 exopolyphosphatase compare
CCNA_01814 +2.2 15.8 nitrogen regulation protein ntrB compare
CCNA_01751 +2.2 8.1 aminodeoxychorismate lyase compare
CCNA_R0048 +2.1 2.8 tRNA-Leu compare
CCNA_02387 +2.1 17.3 glutathione reductase compare
CCNA_01622 +2.0 6.7 Rsh ppGpp hydrolase-synthetase compare
CCNA_01324 +1.9 8.5 LSU ribosomal protein L30P compare
CCNA_01583 +1.9 4.4 phosphate-binding protein compare
CCNA_01593 +1.8 11.0 Xaa-pro aminopeptidase compare
CCNA_01525 +1.8 9.0 flagellar biosynthesis repressor flbT compare
CCNA_00013 +1.8 15.2 protein-PII uridylyltransferase compare
CCNA_00752 +1.7 10.1 3-hydroxybutyryl-CoA dehydrogenase compare
CCNA_01526 +1.7 6.7 flagellar biosynthesis regulatory protein flaF compare
CCNA_01251 +1.7 9.5 FepC-type transporter protein compare
CCNA_00766 +1.7 10.9 cobalamin adenosyltransferase family protein compare
CCNA_01250 +1.6 9.3 FecCD-family transporter protein compare
CCNA_01804 +1.6 9.6 glutathione peroxidase compare
CCNA_03030 +1.6 10.5 cytochrome c2 compare
CCNA_01801 +1.6 6.3 hypothetical protein compare
CCNA_02000 +1.5 3.0 SSU ribosomal protein S2P compare
CCNA_01840 +1.5 11.8 MerR-family transcriptional regulator compare
CCNA_01968 +1.5 3.3 pentapeptide repeats containing protein compare
CCNA_03524 +1.5 8.0 di-/tripeptide transporter compare
CCNA_02591 +1.4 6.5 glutaredoxin compare
CCNA_00296 +1.4 6.9 phosphate regulon response regulator PhoB compare
CCNA_03858 +1.4 11.4 protein translocase subunit secB compare
CCNA_02081 +1.4 5.5 Sec-independent protein translocase protein tatB compare
CCNA_R0037 +1.4 5.6 tRNA-Glu compare
CCNA_02467 +1.4 8.5 polyisoprenylphosphate hexose-1-phosphotransferase pssZ compare
CCNA_01739 +1.4 7.7 LSU ribosomal protein L9P compare
CCNA_01931 +1.4 8.3 TetR-family transcriptional regulator compare
CCNA_01966 +1.4 9.9 vitamin B12-dependent ribonucleotide reductase compare
CCNA_02324 +1.4 8.7 heat shock protein 33 hsp33 compare
CCNA_01942 +1.4 6.9 Rrf2 family protein compare
CCNA_01249 +1.3 6.9 ABC-transporter substrate binding protein compare
CCNA_02646 +1.3 2.0 cell division protein MraZ compare
CCNA_03951 +1.3 7.1 hypothetical protein compare
CCNA_02025 +1.3 7.1 hypothetical protein compare
CCNA_00292 +1.3 2.9 phosphate transport system permease protein pstC compare
CCNA_01913 +1.3 9.1 MarR-family transcriptional regulator compare
CCNA_01603 +1.3 7.7 aspartate aminotransferase compare
CCNA_01573 +1.3 6.9 ArsR-family transcriptional regulator compare
CCNA_01086 +1.3 8.9 GTP-binding protein lepA compare
CCNA_01655 +1.3 8.2 cyclophilin-type peptidylprolyl cis-trans isomerase compare
CCNA_01939 +1.3 3.5 ADP-ribosylglycohydrolase compare
CCNA_03938 +1.3 4.9 hypothetical protein compare
CCNA_02133 +1.3 6.4 glucokinase compare
CCNA_00505 +1.3 5.0 ubiquinol-cytochrome c reductase iron-sulfur subunit compare
CCNA_02910 +1.3 10.4 TonB-dependent receptor compare
CCNA_02026 +1.3 4.7 hypothetical protein compare
CCNA_01731 +1.3 5.7 colicin V production protein CvpA compare
CCNA_01802 +1.3 2.4 hypothetical protein compare
CCNA_00447 +1.3 7.4 chemotaxis protein cheD compare
CCNA_01678 +1.3 7.2 arginine N-succinyltransferase, beta chain compare
CCNA_02459 +1.3 10.1 methylmalonyl-CoA mutase alpha subunit compare
CCNA_01712 +1.2 8.2 CopY/TcrY family transcriptional repressor compare
CCNA_02103 +1.2 8.7 hypothetical protein compare
CCNA_03123 +1.2 7.6 ArsR-family transcriptional regulator compare
CCNA_00518 +1.2 7.1 LSU ribosomal protein L25P compare
CCNA_03954 +1.2 1.7 hypothetical protein compare
CCNA_01752 +1.2 7.3 YicC-family protein compare
CCNA_00945 +1.2 7.1 chemotaxis protein MotD compare
CCNA_03893 +1.2 3.2 hypothetical protein compare
CCNA_00347 +1.2 3.7 hypothetical protein compare
CCNA_00872 +1.2 4.8 glutaredoxin compare
CCNA_01058 +1.2 4.6 helix-turn-helix transcriptional regulator compare
CCNA_02011 +1.2 5.8 methylmalonyl CoA epimerase compare
CCNA_02225 +1.2 7.4 ArsR family/SAM-dependent transcriptional regulator compare
CCNA_01742 +1.2 5.1 hypothetical protein compare
CCNA_03913 +1.2 1.5 hypothetical protein compare
CCNA_00368 +1.2 8.3 phosphonates transport system permease protein phnE compare
CCNA_02004 +1.2 2.5 SOS-induced inhibitor of cell division SidA compare
CCNA_01181 +1.2 6.3 hypothetical protein compare
CCNA_03643 +1.2 1.7 succinate dehydrogenase membrane anchor subunit compare
CCNA_03129 +1.2 8.7 peptidoglycan-specific endopeptidase, M23 family compare
CCNA_01949 +1.2 3.1 bactofilin A BacA compare
CCNA_R0054 +1.2 2.5 tRNA-Gly compare
CCNA_00947 +1.2 8.8 flagellar hook protein FlgE compare
CCNA_02341 +1.2 5.7 small heat shock protein compare
CCNA_00354 +1.2 6.8 NlpC/P60 CHAP domain amidase protein compare
CCNA_01405 +1.2 4.8 GIY-YIG domain protein compare
CCNA_02805 +1.2 4.2 hypothetical protein compare
CCNA_01186 +1.2 4.4 hypothetical protein compare
CCNA_02729 +1.1 8.8 oligopeptide transporter compare
CCNA_01684 +1.1 6.4 phenylalanine-4-hydroxylase compare
CCNA_03214 +1.1 5.9 hypothetical protein compare
CCNA_01276 +1.1 3.8 cytochrome c5 compare
CCNA_00189 +1.1 2.3 zinc-finger domain protein compare
CCNA_02980 +1.1 7.9 tryptophan 2,3-dioxygenase compare
CCNA_00998 +1.1 5.5 ROS/MUCR transcriptional regulator compare
CCNA_02330 +1.1 5.4 hypothetical protein compare
CCNA_01790 +1.1 4.7 protein translocase subunit secG compare
CCNA_00555 +1.1 6.1 nitrogen regulatory protein P-II compare
CCNA_01453 +1.1 4.2 electron transport complex I subunit, NADH-ubiquinone oxidoreductase compare
CCNA_02305 +1.1 7.2 chorismate mutase-family protein compare
CCNA_01681 +1.1 4.4 RimI-like acetyltransferase compare
CCNA_02071 +1.1 1.5 protein translocase subunit YajC compare
CCNA_02728 +1.1 5.3 hypothetical protein compare
CCNA_00939 +1.1 4.8 MarR-family transcriptional regulator compare
CCNA_01619 +1.1 6.3 NYN domain protein compare
CCNA_02416 +1.1 5.6 DNA-binding protein HU compare
CCNA_02619 +1.1 8.6 stomatin/prohibitin-related protein compare
CCNA_02132 +1.1 4.7 LacI-family transcriptional regulator compare
CCNA_01629 +1.1 5.7 signal peptidase I compare
CCNA_00684 +1.1 6.9 anti-sigma factor, ChrR-family compare
CCNA_03325 +1.1 4.5 hypothetical protein compare
CCNA_00726 +1.1 8.3 acyl-CoA dehydrogenase compare
CCNA_00032 +1.1 3.5 antitoxin protein VapB compare
CCNA_02576 +1.1 7.6 phosphoribosylamidoimidazole-succinocarboxamide synthase compare
CCNA_01728 +1.1 5.9 short chain dehydrogenase compare
CCNA_01541 +1.1 6.9 LysR-family transcriptional regulator compare
CCNA_03215 +1.1 7.1 ARO8 family aminotransferase/HTH DNA-binding protein compare
CCNA_01530 +1.1 7.1 flagellin FljJ compare
CCNA_02297 +1.0 4.1 hypoxanthine-guanine phosphoribosyltransferase compare
CCNA_03271 +1.0 7.2 methionine gamma-lyase compare
CCNA_01063 +1.0 6.1 UDP-perosamine 4-acetyl transferase compare
CCNA_01851 +1.0 8.1 quinol cytochrome oxidase polypeptide II compare
CCNA_02339 +1.0 7.2 methyltransferase compare
CCNA_01094 +1.0 2.4 hypothetical protein compare
CCNA_02534 +1.0 2.0 hypothetical protein compare
CCNA_03961 +1.0 2.9 hypothetical protein compare
CCNA_00441 +1.0 5.8 chemotaxis receiver domain protein cheYI compare
CCNA_03371 +1.0 4.9 bacterioferritin compare
CCNA_02063 +1.0 4.0 beta-barrel assembly machine (BAM) protein BamD compare
CCNA_00311 +1.0 6.8 Zn-dependent protease family protein compare
CCNA_00107 +1.0 2.9 Trm112p-like protein compare
CCNA_01680 +1.0 6.4 succinylarginine dihydrolase compare
CCNA_00944 +1.0 5.4 flagellar hook length determination protein compare
CCNA_01059 +1.0 7.1 S-layer protein rsaA compare
CCNA_03041 +1.0 6.9 pilus assembly protein CpaB compare
CCNA_03910 +1.0 1.4 hypothetical protein compare
CCNA_00699 +1.0 4.8 LSU ribosomal protein L28P compare
CCNA_01420 +1.0 3.1 NrdR family transcriptional regulator compare
CCNA_02171 +1.0 7.4 nucleoside permease nupC compare
CCNA_02458 +1.0 7.3 methylmalonyl-CoA mutase beta subunit compare
CCNA_01972 +1.0 6.4 anthranilate synthase component I compare
CCNA_01608 +1.0 4.2 TetR-family transcriptional regulator compare
CCNA_02114 +1.0 1.5 hypothetical protein compare
CCNA_02273 +1.0 3.4 glutathione peroxidase compare
CCNA_00442 +1.0 7.9 chemotaxis histidine kinase protein cheAI compare
CCNA_03989 +1.0 7.5 MarR-family HTH transcriptional regulator / N-acyltransferase compare
CCNA_02617 +1.0 7.4 histidinol-phosphate aminotransferase compare
CCNA_02067 +1.0 5.4 conserved membrane spanning protein compare
CCNA_03040 +1.0 7.4 outer membrane pilus secretion channel CpaC compare
CCNA_01168 +1.0 1.8 3-ketoacyl-CoA thiolase compare
CCNA_03799 +1.0 3.9 short chain dehydrogenase compare
CCNA_03513 +1.0 5.9 cytochrome c oxidase subunit III coxC compare
CCNA_01193 +1.0 7.1 amylosucrase compare
CCNA_03062 +1.0 6.3 cell wall hydrolase family protein compare
CCNA_01813 +1.0 4.8 tRNA-dihydrouridine synthase compare
CCNA_01820 +1.0 5.7 GTP-binding protein hflX compare
CCNA_01580 +0.9 4.3 M15 superfamily membrane peptidase compare
CCNA_03975 +0.9 4.3 hypothetical protein compare
CCNA_01065 +0.9 5.7 glycosyltransferase compare
CCNA_01024 +0.9 6.4 hypothetical protein compare
CCNA_00803 +0.9 3.8 chemotaxis protein cheW compare
CCNA_01582 +0.9 1.4 Glutathione-dependent formaldehyde-activating enzyme compare
CCNA_03038 +0.9 7.0 pilus assembly ATPase CpaE compare
CCNA_01339 +0.9 4.5 ArsR-family transcriptional regulator compare
CCNA_02969 +0.9 5.2 TetR-family transcriptional regulator compare
CCNA_03522 +0.9 6.7 Zn-dependent protease TldD compare
CCNA_00367 +0.9 6.7 phosphonates-binding protein compare
CCNA_02287 +0.9 4.9 TetR-family transcriptional regulator compare
CCNA_03280 +0.9 8.2 pyruvate ferredoxin/flavodoxin oxidoreductase family protein compare
CCNA_00215 +0.9 5.9 SapC surface layer protein compare
CCNA_02012 +0.9 5.3 metal-dependent hydrolase compare
CCNA_02961 +0.9 6.3 NeuB-family N-acetylneuraminate synthase compare
CCNA_01173 +0.9 5.1 chorismate mutase compare
CCNA_00257 +0.9 3.8 adenosylhomocysteinase compare
CCNA_00682 +0.9 4.8 MarR-family transcriptional regulator compare
CCNA_01679 +0.9 4.9 succinylglutamic semialdehyde dehydrogenase compare
CCNA_02309 +0.9 3.3 EF hand domain protein compare
CCNA_01393 +0.9 7.3 soluble lytic murein transglycosylase compare
CCNA_00895 +0.9 5.0 hypothetical protein compare
CCNA_03354 +0.9 3.2 5-formyltetrahydrofolate cyclo-ligase compare
CCNA_03089 +0.9 5.0 hypothetical protein compare
CCNA_02976 +0.9 4.5 MCP-signal associated domain protein compare
CCNA_03918 +0.9 1.2 hypothetical protein compare
CCNA_01527 +0.9 6.2 flagellin fljL compare
CCNA_02475 +0.9 6.2 transcriptional regulator vanR compare
CCNA_03807 +0.9 5.2 organic solvent resistance transport system Ttg2D protein compare
CCNA_00440 +0.9 3.0 STAS domain protein compare
CCNA_00352 +0.9 6.1 integral membrane protein compare
CCNA_02021 +0.9 2.4 hypothetical protein compare
CCNA_00922 +0.9 7.1 ClpB protein compare
CCNA_01020 +0.9 4.7 LacI-family transcriptional regulator compare
CCNA_00210 +0.9 7.0 TonB-dependent receptor compare
CCNA_03400 +0.9 2.5 hypothetical protein compare
CCNA_01531 +0.9 6.0 acetyltransferase compare
CCNA_01528 +0.9 4.7 flagellin fljK compare
CCNA_03614 +0.9 4.2 hypothetical protein compare
CCNA_03740 +0.9 4.4 cysteine synthase compare
CCNA_03012 +0.9 5.1 peroxiredoxin compare
CCNA_02616 +0.9 5.7 4-hydroxyphenylpyruvate dioxygenase compare
CCNA_00375 +0.9 2.8 hypothetical protein compare
CCNA_00931 +0.9 5.4 GTP cyclohydrolase II/3,4-dihydroxy-2-butanone-4-phosphate synthase compare
CCNA_00400 +0.9 4.2 MarR/EmrR-family transcriptional regulator compare


Specific Phenotypes

For 17 genes in this experiment

For stress Cisplatin in Caulobacter crescentus NA1000

For stress Cisplatin across organisms