Experiment set3IT027 for Pseudomonas fluorescens FW300-N1B4

Compare to:

LB with Choline Lysine 6 mM

Group: stress
Media: LB + Choline Lysine (6 mM)
Culturing: pseudo1_N1B4_ML1, 48 well microplate; Tecan Infinite F200, Aerobic, at 26 (C), shaken=orbital
By: Mark on 12/16/2014
Media components: 10 g/L Tryptone, 5 g/L Yeast Extract, 5 g/L Sodium Chloride
Growth plate: 1041 B5,B6

Specific Phenotypes

For 2 genes in this experiment

For stress Choline Lysine in Pseudomonas fluorescens FW300-N1B4

For stress Choline Lysine across organisms

SEED Subsystems

Subsystem #Specific
Bacterial Chemotaxis 1
Flagellar motility 1
Rhamnose containing glycans 1
Two-component regulatory systems in Campylobacter 1
dTDP-rhamnose synthesis 1
linker unit-arabinogalactan synthesis 1

Metabolic Maps

Color code by fitness: see overview map or list of maps.

Maps containing gene(s) with specific phenotypes:

MetaCyc Pathways

Pathways that contain genes with specific phenotypes:

Pathway #Steps #Present #Specific
dTDP-β-L-rhamnose biosynthesis 5 5 1
O-antigen building blocks biosynthesis (E. coli) 11 10 1
superpathway of dTDP-glucose-derived O-antigen building blocks biosynthesis 19 5 1
superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis 33 12 1