Experiment set3IT027 for Sinorhizobium meliloti 1021

Compare to:

Uridine nitrogen source

200 most important genes:

  gene name fitness t score description  
SMc01801 -7.1 -3.0 N-acetylglutamylphosphate reductase (EC 1.2.1.38) (from data) compare
SMc01843 -7.0 -11.7 5,10-methylenetetrahydrofolate reductase compare
SMc04405 -7.0 -9.6 3-isopropylmalate dehydrogenase compare
SMc00963 -6.8 -3.6 hypothetical protein compare
SMc00235 -6.7 -9.1 anthranilate phosphoribosyltransferase compare
SMc02767 -6.6 -10.9 N-(5'-phosphoribosyl)anthranilate isomerase compare
SMc00917 -6.6 -5.2 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
SMc00640 -6.6 -10.0 phosphoserine aminotransferase compare
SMc02717 -6.5 -13.9 2-isopropylmalate synthase compare
SMc04028 -6.5 -19.5 glutamate synthase compare
SMc00494 -6.3 -1.6 phosphoribosylformylglycinamidine synthase subunit PurS compare
SMc02899 -6.3 -11.1 prephenate dehydratase compare
SMc02572 -6.2 -4.1 imidazole glycerol phosphate synthase subunit HisH compare
SMc00236 -6.2 -4.7 Indole-3-glycerol phosphate synthase compare
SMc04045 -6.1 -8.4 dihydroxy-acid dehydratase compare
SMc03797 -6.0 -10.6 homoserine O-succinyltransferase compare
SMc00615 -6.0 -10.7 phosphoribosylaminoimidazole synthetase compare
SMc00711 -5.9 -4.1 cyclohexadienyl dehydrogenase compare
SMc00918 -5.9 -11.6 ATP phosphoribosyltransferase regulatory subunit compare
SMc02570 -5.9 -6.9 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
SMc03070 -5.8 -8.0 glucose-6-phosphate 1-dehydrogenase compare
SMc03229 -5.8 -2.5 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
SMc00495 -5.7 -4.7 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
SMc03112 -5.7 -18.6 B12-dependent methionine synthase compare
SMc00614 -5.7 -7.2 phosphoribosylglycinamide formyltransferase compare
SMc00815 -5.7 -2.4 inosine 5'-monophosphate dehydrogenase compare
SMc02569 -5.7 -3.8 imidazole glycerol phosphate synthase subunit HisF compare
SMc01814 -5.6 -13.1 oxidoreductase conserved
SMc02766 -5.6 -18.1 tryptophan synthase subunit beta compare
SMc04002 -5.5 -6.9 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
SMc03823 -5.5 -13.3 isopropylmalate isomerase large subunit compare
SMc04026 -5.5 -8.2 glutamate synthase compare
SMc01431 -5.4 -14.4 acetolactate synthase 3 catalytic subunit compare
SMc01004 -5.4 -8.8 phosphoribosyl-AMP cyclohydrolase compare
SMc01494 -5.3 -9.6 phosphoserine phosphatase compare
SMc02765 -5.3 -15.0 tryptophan synthase subunit alpha compare
SMc03777 -5.3 -8.0 gamma-glutamyl phosphate reductase compare
SMc02725 -5.3 -16.0 anthranilate synthase compare
SMc00993 -5.2 -11.2 phosphoribosylamine--glycine ligase compare
SMc01726 -5.1 -6.0 acetylglutamate kinase compare
SM_b21174 -5.0 -5.1 phosphate uptake ABC transporter permease compare
SMc03826 -5.0 -4.1 argininosuccinate synthase compare
SMc01119 -5.0 -1.7 hypothetical protein compare
SMc00488 -4.9 -13.9 phosphoribosylformylglycinamidine synthase II compare
SMa1635 -4.9 -1.7 hypothetical protein compare
SMc00554 -4.9 -10.9 amidophosphoribosyltransferase compare
SMc03895 -4.9 -16.6 pyruvate carboxylase compare
SMc00090 -4.8 -11.9 sulfate adenylyltransferase compare
SMc01821 -4.8 -12.8 Dihydropyrimidinase (EC 3.5.2.2) (from data) conserved
SMc01815 -4.8 -14.2 Dihydropyrimidine dehydrogenase (NADP(+)) (EC 1.3.1.2) (from data) conserved
SMc01042 -4.7 -7.1 nitrogen regulation protein compare
SMc02123 -4.7 -3.2 required for sulfate utilization, putative electron transport protein for sulfite reductase (from data) compare
SMc00293 -4.6 -11.7 homoserine dehydrogenase compare
SMc01820 -4.6 -10.1 Beta-ureidopropionase (EC 3.5.1.6) (from data) conserved
SMc03978 -4.6 -3.2 transketolase compare
SMc00493 -4.6 -6.2 phosphoribosylformylglycinamidine synthase I compare
SMc02124 -4.5 -12.5 nitrite reductase compare
SMc00876 -4.4 -7.4 ATP-binding MRP protein compare
SMc01569 -4.4 -1.5 carbamoyl phosphate synthase small subunit compare
SMc01881 -4.4 -3.6 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
SMc02138 -4.4 -7.1 acetylornithine transaminase compare
SMc00131 -4.4 -14.5 transcriptional regulator compare
SMc04088 -4.3 -9.2 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
SMc01880 -4.3 -2.9 pantoate--beta-alanine ligase compare
SMc02755 -4.2 -8.3 S-adenosyl-L-homocysteine hydrolase compare
SMc02217 -4.2 -7.0 O-succinylhomoserine sulfhydrylase compare
SMc02307 -4.2 -9.5 histidinol dehydrogenase compare
SM_b21175 -4.2 -4.0 phosphate uptake ABC transporter permease compare
SMc04001 -4.1 -1.0 phosphoribosylaminoimidazole carboxylase catalytic subunit protein compare
SM_b21177 -4.1 -8.6 phosphate uptake ABC transporter ATP-binding protein compare
SMc03763 -4.1 -4.6 cytosine-specific methyltransferase compare
SMc00091 -4.0 -10.8 sulfate adenylyltransferase compare
SMc00092 -4.0 -7.9 phosphoadenosine phosphosulfate reductase compare
SMc01124 -3.9 -7.8 PII uridylyl-transferase compare
SMc02137 -3.9 -3.1 ornithine carbamoyltransferase compare
SMc01043 -3.8 -6.4 nitrogen assimilation regulatory protein compare
SMc03795 -3.8 -1.3 isopropylmalate isomerase small subunit compare
SMc01770 -3.7 -1.1 serine hydroxymethyltransferase compare
SMc01215 -3.7 -5.0 carbamoyl phosphate synthase large subunit compare
SMc01842 -3.7 -2.9 methyltransferase transcription regulator protein compare
SMc02558 -3.6 -6.1 hypothetical protein compare
SMc02724 -3.5 -3.8 hypothetical protein compare
SMc01139 -3.5 -4.2 RNA polymerase factor sigma-54 compare
SMc00017 -3.5 -1.2 homoserine kinase compare
SMc04296 -3.5 -1.2 cell division protein FtsZ compare
SMc03776 -3.5 -3.5 gamma-glutamyl kinase compare
SMc01430 -3.3 -5.4 acetolactate synthase 3 regulatory subunit compare
SMc00641 -3.2 -4.9 D-3-phosphoglycerate dehydrogenase compare
SMc04346 -3.1 -3.7 ketol-acid reductoisomerase compare
SMc02425 -3.1 -3.3 transcriptional regulator compare
SMc01054 -3.0 -2.8 required for sulfate utilization, putative electron source for sulfite reductase CysI (from data) compare
SMc00781 -2.9 -7.9 malonate-semialdehyde dehydrogenase (acetylating) (EC 1.2.1.18) (from data) conserved
SMc02707 -2.9 -1.5 hypothetical protein compare
SMc00012 -2.8 -1.7 cytochrome C oxidase assembly protein compare
SMc01053 -2.7 -4.3 siroheme synthase compare
SMc01579 -2.7 -1.1 hypothetical protein compare
SMc00302 -2.6 -3.2 hypothetical protein compare
SMc02280 -2.6 -2.0 hypothetical protein compare
SMc02140 -2.6 -2.2 phosphate regulon transcriptional regulatory protein compare
SMc02983 -2.6 -6.8 ornithine, DAP, or arginine decarboxylase compare
SM_b21176 -2.6 -3.6 phosphate uptake ABC transporter substrate-binding protein precursor compare
SMc03069 -2.5 -2.7 6-phosphogluconolactonase compare
SMc02510 -2.5 -1.1 ferric uptake regulation protein compare
SMc00461 -2.5 -1.9 deoxyuridine 5'-triphosphate nucleotidohydrolase compare
SMc02693 -2.4 -1.8 peptidyl-tRNA hydrolase compare
SMc00511 -2.3 -3.3 D-ribulose-5-phosphate 3-epimerase compare
SMc01568 -2.3 -1.9 hypothetical protein compare
SMc00492 -2.3 -0.8 hypothetical protein compare
SMc01472 -2.3 -1.6 50S ribosomal protein L11 methyltransferase compare
SMc03100 -2.2 -1.3 hypothetical protein compare
SMc00334 -2.2 -2.1 cytidylate kinase compare
SMc01147 -2.2 -4.3 coproporphyrinogen III oxidase compare
SMc01041 -2.2 -1.4 NIFR3-like protein compare
SMc02574 -2.1 -2.8 imidazoleglycerol-phosphate dehydratase compare
SMc03967 -2.1 -2.0 Holliday junction resolvase compare
SM_b20948 -2.1 -1.8 glucosyltransferase compare
SMc02753 -2.0 -1.5 PTS system transporter subunit IIA compare
SMc01280 -2.0 -1.8 protease compare
SMc02232 -2.0 -2.5 hypothetical protein compare
SMc01845 -2.0 -2.0 transglycosylase transmembrane protein compare
SMc02495 -2.0 -1.5 translaldolase compare
SMc02102 -1.9 -4.7 hypothetical protein compare
SMc01174 -1.9 -8.6 cysteine synthase A compare
SMc01515 -1.9 -1.9 hypothetical protein compare
SMc03140 -1.9 -4.5 transcriptional regulator compare
SMa2289 -1.9 -1.3 hypothetical protein compare
SMc02147 -1.9 -5.3 phosphate regulon sensor histidine kinase transmembrane protein compare
SMc02683 -1.8 -2.1 hypothetical protein compare
SM_b20307 -1.8 -1.1 dihydroxyacetone kinase compare
SMc00726 -1.8 -0.9 thiol:disulfide interchange redox-active center transmembrane protein compare
SMc01578 -1.8 -7.8 aspartate aminotransferase compare
SMc01360 -1.8 -2.0 aspartate carbamoyltransferase catalytic subunit compare
SMc00296 -1.8 -7.2 POLY3-hydroxybutyrate polymerase compare
SMc00784 -1.7 -7.8 iron binding protein compare
SM_b20728 -1.7 -1.8 hypothetical protein compare
SMc02068 -1.7 -5.8 ABC transporter ATP-binding protein compare
SMa0249 -1.7 -2.4 TRAP-type small permease component compare
SM_b21679 -1.7 -1.4 hypothetical protein compare
SMc01516 -1.6 -2.0 hypothetical protein compare
SMc03836 -1.6 -1.4 acyl-CoA thioesterase i protein compare
SMc02144 -1.6 -2.3 phosphate ABC transporter permease compare
SMc02844 -1.5 -1.2 transcriptional regulator compare
SMc03924 -1.5 -7.2 glycogen synthase compare
SMc02145 -1.5 -1.1 signal peptide protein compare
SMc02833 -1.5 -1.9 penicillin-insensitive murein endopeptidase compare
SM_b21347 -1.5 -1.5 pectin degradation protein compare
SMc00775 -1.5 -8.2 iron(III) permease compare
SMc02435 -1.5 -1.7 methyltransferase compare
SMa0760 -1.4 -2.2 FixT2 anti-kinase compare
SMc01440 -1.4 -2.8 hydrolase serine protease transmembrane protein compare
SMc00619 -1.4 -1.5 hypothetical protein compare
SMc02303 -1.4 -1.7 partial transposase for insertion sequence element ISRM1 compare
SMc01974 -1.4 -2.5 transcriptional regulator compare
SMc02141 -1.4 -3.3 phosphate transporter PhoU compare
SMc02640 -1.4 -3.0 UDP-glucuronic acid epimerase compare
SMc02115 -1.4 -1.1 hypothetical protein compare
SMc00295 -1.3 -0.6 hypothetical protein compare
SMc01153 -1.3 -0.9 enoyl-CoA hydratase compare
SMc02858 -1.3 -0.9 chaperone protein DnaJ compare
SMc01930 -1.3 -1.4 hypothetical protein compare
SMc00166 -1.3 -1.4 oxidoreductase NAD protein compare
SMa1174 -1.3 -1.5 hypothetical protein compare
SMa0905 -1.3 -1.0 hypothetical protein compare
SMc02246 -1.3 -0.6 hypothetical protein compare
SMa0789 -1.3 -2.8 GntR family transcriptional regulator compare
SMc02641 -1.3 -2.0 UDP-glucose 6-dehydrogenase compare
SMc03979 -1.3 -1.1 glyceraldehyde-3-phosphate dehydrogenase compare
SMc01622 -1.3 -3.0 oxidoreductase compare
SMc00412 -1.2 -3.0 orotidine 5'-phosphate decarboxylase compare
SMc02505 -1.2 -0.8 hypothetical protein compare
SMc02909 -1.2 -1.4 transglycosylase transmembrane protein compare
SMc00067 -1.2 -5.1 outer-membranne lipoprotein compare
SMc00981 -1.2 -4.0 ferredoxin protein compare
SMc00353 -1.2 -1.1 transmembrane protein compare
SMc02055 -1.2 -1.4 phytoene synthase compare
SM_b20701 -1.2 -0.8 hypothetical protein compare
SMc01342 -1.2 -2.9 hypothetical protein compare
SMc00914 -1.2 -3.1 oxidoreductase compare
SMa0112 -1.2 -2.2 hypothetical protein compare
SMc00821 -1.1 -1.3 hypothetical protein compare
SMa1924 -1.1 -0.6 hypothetical protein compare
SMc00656 -1.1 -0.6 hypothetical protein compare
SM_b20042 -1.1 -1.7 hypothetical protein compare
SMc02234 -1.1 -1.4 hypothetical protein compare
SMc00941 -1.1 -1.2 hypothetical protein compare
SMc02694 -1.1 -0.5 ATP-dependent Clp protease adaptor compare
SMc03981 -1.1 -2.5 phosphoglycerate kinase compare
SMc02862 -1.1 -3.3 Pit accessory protein compare
SMc01852 -1.1 -5.0 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
SMc03974 -1.1 -3.1 hypothetical protein compare
SMc00982 -1.1 -2.9 dioxygenase compare
SMc02484 -1.0 -3.5 amino acid efflux transmembrane protein compare
SMa0513 -1.0 -1.7 gluconate 5-dehydrogenase compare
SMc02114 -1.0 -1.9 hypothetical protein compare
SMc02573 -1.0 -1.3 hypothetical protein compare
SMc01361 -1.0 -1.9 dihydroorotase compare
SMc01991 -1.0 -1.0 short chain dehydrogenase compare
SMc00053 -1.0 -0.7 monovalent cation/H+ antiporter subunit C compare
SMc01208 -1.0 -2.3 peptidyl-prolyl cis-trans isomerase B protein compare
SM_b21191 -1.0 -4.5 surface saccharide ABC transporter ATP-binding/membrane spanning protein compare


Specific Phenotypes

For 9 genes in this experiment

For nitrogen source Uridine in Sinorhizobium meliloti 1021

For nitrogen source Uridine across organisms