Experiment set3IT025 for Caulobacter crescentus NA1000

Compare to:

PYE with Thallium(I) acetate 0.002 mg/ml

200 most detrimental genes:

  gene name fitness t score description  
CCNA_01059 +4.5 22.0 S-layer protein rsaA compare
CCNA_03072 +3.9 14.0 TetR-family transcriptional regulator compare
CCNA_01060 +3.8 18.8 type I protein secretion ATP-binding protein RsaD compare
CCNA_01061 +3.8 14.5 type I secretion adaptor protein RsaE compare
CCNA_01525 +3.7 13.1 flagellar biosynthesis repressor flbT compare
CCNA_02037 +2.8 18.6 ATP-dependent endopeptidase Lon compare
CCNA_03858 +2.8 23.1 protein translocase subunit secB compare
CCNA_02026 +2.5 12.7 hypothetical protein compare
CCNA_03705 +2.5 7.0 hypothetical protein compare
CCNA_01979 +2.4 14.6 LexA repressor compare
CCNA_00011 +2.4 7.5 chaperone protein DnaJ compare
CCNA_02030 +2.3 13.4 hypothetical protein compare
CCNA_01375 +2.3 9.7 lactoylglutathione lyase compare
CCNA_00392 +2.3 17.0 dihydroorotase compare
CCNA_01851 +2.2 16.5 quinol cytochrome oxidase polypeptide II compare
CCNA_01242 +2.2 15.3 amino acid permease compare
CCNA_00562 +2.2 14.8 dihydroorotate dehydrogenase compare
CCNA_01420 +2.2 8.7 NrdR family transcriptional regulator compare
CCNA_03043 +2.1 6.3 type IV pilin protein pilA compare
CCNA_02042 +2.0 11.3 trigger factor chaperone compare
CCNA_02698 +2.0 11.8 Inosine-uridine nucleoside N-ribohydrolase compare
CCNA_01712 +2.0 15.7 CopY/TcrY family transcriptional repressor compare
CCNA_03030 +2.0 13.3 cytochrome c2 compare
CCNA_00162 +2.0 8.9 hypothetical protein compare
CCNA_01964 +2.0 7.6 NADH dehydrogenase compare
CCNA_02075 +1.9 4.1 peptidoglycan binding endopeptidase DipM compare
CCNA_01526 +1.9 7.7 flagellar biosynthesis regulatory protein flaF compare
CCNA_02025 +1.9 12.0 hypothetical protein compare
CCNA_02133 +1.9 10.5 glucokinase compare
CCNA_00953 +1.9 7.9 flagellar motor switch protein FliN compare
CCNA_02028 +1.9 3.8 NTF2 superfamily protein compare
CCNA_00781 +1.9 14.0 two-component receiver protein CpdR compare
CCNA_01850 +1.8 13.9 quinol cytochrome oxidase polypeptide I compare
CCNA_00999 +1.8 7.2 PAS-family motility and cell cycle regulatory protein MopJ compare
CCNA_03136 +1.8 8.0 flagellar export protein FliJ compare
CCNA_00043 +1.8 7.7 N utilization substance protein A NusA compare
CCNA_03064 +1.8 7.8 PadR-family transcriptional regulator compare
CCNA_03805 +1.8 9.9 PadR-family transcriptional regulator compare
CCNA_00950 +1.8 13.4 flagellar M-ring protein FliF compare
CCNA_02000 +1.8 4.4 SSU ribosomal protein S2P compare
CCNA_00168 +1.8 12.6 polysaccharide export protein compare
CCNA_02071 +1.8 3.1 protein translocase subunit YajC compare
CCNA_03598 +1.7 2.8 two-component sensor histidine kinase DivL compare
CCNA_00952 +1.7 10.0 flagellar assembly protein FlbE/FliH compare
CCNA_02644 +1.7 5.8 cell division protein FtsL compare
CCNA_02448 +1.7 10.6 hypothetical protein compare
CCNA_02646 +1.7 3.0 cell division protein MraZ compare
CCNA_03614 +1.7 9.4 hypothetical protein compare
CCNA_02663 +1.6 2.8 DnaK suppressor protein DksA compare
CCNA_03401 +1.6 6.2 conserved hypothetical cytosolic protein compare
CCNA_01624 +1.6 4.9 orotate phosphoribosyltransferase compare
CCNA_03824 +1.6 10.4 2-polyprenylphenol 6-hydroxylase accessory protein UbiB compare
CCNA_02103 +1.6 7.7 hypothetical protein compare
CCNA_02910 +1.6 12.9 TonB-dependent receptor compare
CCNA_01603 +1.6 8.6 aspartate aminotransferase compare
CCNA_03961 +1.6 6.2 hypothetical protein compare
CCNA_01968 +1.6 4.6 pentapeptide repeats containing protein compare
CCNA_01815 +1.6 11.0 nitrogen assimilation regulatory protein NtrC compare
CCNA_02575 +1.6 4.7 hypothetical protein compare
CCNA_01433 +1.5 5.3 integration host factor alpha-subunit compare
CCNA_00924 +1.5 9.0 MarR/EmrR family transcriptional regulator compare
CCNA_02732 +1.5 7.0 hypothetical protein compare
CCNA_02324 +1.5 9.7 heat shock protein 33 hsp33 compare
CCNA_00951 +1.5 9.2 flagellar motor switch protein FliG compare
CCNA_02021 +1.5 6.1 hypothetical protein compare
CCNA_00954 +1.5 10.7 AAA-family response regulator flbD compare
CCNA_02980 +1.5 10.6 tryptophan 2,3-dioxygenase compare
CCNA_02278 +1.5 7.0 hypothetical protein compare
CCNA_00163 +1.5 9.6 exopolysaccharide transport family protein compare
CCNA_00104 +1.5 9.8 orotidine 5'-phosphate decarboxylase compare
CCNA_01840 +1.5 11.8 MerR-family transcriptional regulator compare
CCNA_03404 +1.5 8.1 regulator of CtrA degradation RcdA compare
CCNA_00872 +1.5 4.5 glutaredoxin compare
CCNA_00215 +1.5 9.1 SapC surface layer protein compare
CCNA_01814 +1.5 10.8 nitrogen regulation protein ntrB compare
CCNA_01220 +1.4 5.5 7-keto-8-aminopelargonate synthetase compare
CCNA_02576 +1.4 11.4 phosphoribosylamidoimidazole-succinocarboxamide synthase compare
CCNA_02616 +1.4 9.0 4-hydroxyphenylpyruvate dioxygenase compare
CCNA_02957 +1.4 6.4 ArsR-family transcriptional regulator compare
CCNA_01064 +1.4 6.9 perosamine synthetase compare
CCNA_03954 +1.4 2.3 hypothetical protein compare
CCNA_03918 +1.4 2.3 hypothetical protein compare
CCNA_00459 +1.4 10.4 Na+/H+ antiporter nhaA compare
CCNA_00527 +1.4 7.6 hypothetical protein compare
CCNA_01849 +1.4 8.0 quinol cytochrome oxidase polypeptide III compare
CCNA_R0048 +1.4 1.8 tRNA-Leu compare
CCNA_03615 +1.4 12.0 TonB dependent receptor compare
CCNA_03132 +1.4 5.8 transcriptional regulator, antitoxin protein higA compare
CCNA_00153 +1.4 2.9 adenine nucleotide exchange factor GrpE compare
CCNA_R0075 +1.4 3.2 tRNA-Met compare
CCNA_02063 +1.4 7.1 beta-barrel assembly machine (BAM) protein BamD compare
CCNA_01008 +1.4 9.8 urocanate hydratase compare
CCNA_02140 +1.4 6.4 flagellar motor switch protein fliM compare
CCNA_01995 +1.3 1.7 phosphatidate cytidylyltransferase compare
CCNA_01002 +1.3 8.1 flagellar biosyntheis protein FliP compare
CCNA_01324 +1.3 7.4 LSU ribosomal protein L30P compare
CCNA_01129 +1.3 5.4 flagellar biosynthesis protein FliQ compare
CCNA_00735 +1.3 3.1 beta-barrel assembly machine (BAM) protein BamF compare
CCNA_03951 +1.3 7.9 hypothetical protein compare
CCNA_01164 +1.3 9.8 O-linked N-acetylglucosamine transferase compare
CCNA_00521 +1.3 3.3 antitoxin protein compare
CCNA_01801 +1.3 7.1 hypothetical protein compare
CCNA_03252 +1.3 10.3 CopY/TcrY-family transcriptional regulator compare
CCNA_R0037 +1.3 5.7 tRNA-Glu compare
CCNA_01848 +1.3 9.5 quinol cytochrome oxidase polypeptide IV compare
CCNA_00167 +1.3 9.1 metallophosphatase family protein compare
CCNA_03062 +1.3 8.8 cell wall hydrolase family protein compare
CCNA_00080 +1.3 2.5 LexA-related transcriptional repressor compare
CCNA_03289 +1.3 8.6 HicB-family RNA-binding protein compare
CCNA_03287 +1.3 9.6 PadR-family transcriptional regulator compare
CCNA_03518 +1.3 9.5 cytochrome c oxidase polypeptide II coxB compare
CCNA_01619 +1.3 8.4 NYN domain protein compare
CCNA_01181 +1.3 8.4 hypothetical protein compare
CCNA_00207 +1.3 6.4 succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B compare
CCNA_02526 +1.3 9.3 dihydroorotase compare
CCNA_00161 +1.3 7.1 hypothetical protein compare
CCNA_01006 +1.3 6.0 flagellar hook-basal body complex protein FliE compare
CCNA_02138 +1.3 7.8 hypothetical protein compare
CCNA_01678 +1.2 7.1 arginine N-succinyltransferase, beta chain compare
CCNA_03643 +1.2 1.8 succinate dehydrogenase membrane anchor subunit compare
CCNA_02447 +1.2 8.7 PspA/IM30 family regulatory protein compare
CCNA_00699 +1.2 5.1 LSU ribosomal protein L28P compare
CCNA_03617 +1.2 4.9 Copper(I)-binding protein compare
CCNA_00956 +1.2 8.8 flagellar biosynthesis protein FlhA compare
CCNA_00947 +1.2 9.5 flagellar hook protein FlgE compare
CCNA_02199 +1.2 10.2 methyltransferase compare
CCNA_02135 +1.2 7.4 6-phosphogluconolactonase compare
CCNA_02846 +1.2 8.7 DegP/HtrA-family serine protease compare
CCNA_03281 +1.2 8.7 AsnC-family transcriptional regulator compare
CCNA_03384 +1.2 3.3 LSU ribosomal protein L31P compare
CCNA_R0054 +1.2 3.0 tRNA-Gly compare
CCNA_03989 +1.2 9.4 MarR-family HTH transcriptional regulator / N-acyltransferase compare
CCNA_00518 +1.2 6.7 LSU ribosomal protein L25P compare
CCNA_01573 +1.2 6.5 ArsR-family transcriptional regulator compare
CCNA_00756 +1.2 3.1 hypothetical protein compare
CCNA_02081 +1.2 5.4 Sec-independent protein translocase protein tatB compare
CCNA_01003 +1.2 5.3 flagellar biosynthesis protein FliO compare
CCNA_03938 +1.2 6.7 hypothetical protein compare
CCNA_00944 +1.2 6.7 flagellar hook length determination protein compare
CCNA_02098 +1.2 8.6 molybdopterin-guanine dinucleotide biosynthesis protein A compare
CCNA_03618 +1.2 6.8 SCO1/SenC family protein compare
CCNA_02132 +1.2 5.1 LacI-family transcriptional regulator compare
CCNA_00998 +1.2 5.9 ROS/MUCR transcriptional regulator compare
CCNA_02617 +1.2 9.0 histidinol-phosphate aminotransferase compare
CCNA_03325 +1.2 4.9 hypothetical protein compare
CCNA_00505 +1.1 5.4 ubiquinol-cytochrome c reductase iron-sulfur subunit compare
CCNA_03012 +1.1 4.7 peroxiredoxin compare
CCNA_01065 +1.1 7.4 glycosyltransferase compare
CCNA_01931 +1.1 6.7 TetR-family transcriptional regulator compare
CCNA_01066 +1.1 8.5 glycosyltransferase compare
CCNA_01847 +1.1 8.3 cytochrome c oxidase assembly protein Surf1 compare
CCNA_01578 +1.1 7.2 beta-lactamase repressor compare
CCNA_03808 +1.1 8.6 organic solvent resistance transport system Ttg2C protein compare
CCNA_01453 +1.1 5.4 electron transport complex I subunit, NADH-ubiquinone oxidoreductase compare
CCNA_01790 +1.1 5.0 protein translocase subunit secG compare
CCNA_02134 +1.1 7.7 phosphogluconate dehydratase compare
CCNA_01094 +1.1 2.5 hypothetical protein compare
CCNA_03689 +1.1 7.8 alanine dehydrogenase compare
CCNA_02546 +1.1 7.3 GGDEF/response regulator protein PleD compare
CCNA_01062 +1.1 7.5 GDP-mannose 4,6 dehydratase compare
CCNA_01086 +1.1 7.4 GTP-binding protein lepA compare
CCNA_02619 +1.1 9.1 stomatin/prohibitin-related protein compare
CCNA_01186 +1.1 3.9 hypothetical protein compare
CCNA_03513 +1.1 6.1 cytochrome c oxidase subunit III coxC compare
CCNA_03129 +1.1 7.9 peptidoglycan-specific endopeptidase, M23 family compare
CCNA_01918 +1.1 6.7 cyclic di-GMP effector protein PopA compare
CCNA_01913 +1.1 6.5 MarR-family transcriptional regulator compare
CCNA_01804 +1.1 7.2 glutathione peroxidase compare
CCNA_02339 +1.1 8.0 methyltransferase compare
CCNA_01058 +1.1 5.7 helix-turn-helix transcriptional regulator compare
CCNA_01813 +1.1 6.6 tRNA-dihydrouridine synthase compare
CCNA_02066 +1.1 5.7 phytoene/squalene synthase family protein compare
CCNA_00939 +1.0 4.5 MarR-family transcriptional regulator compare
CCNA_02004 +1.0 2.5 SOS-induced inhibitor of cell division SidA compare
CCNA_03964 +1.0 2.6 hypothetical protein compare
CCNA_01596 +1.0 3.1 DNA helicase II compare
CCNA_03108 +1.0 8.4 TonB-dependent outer membrane receptor compare
CCNA_03479 +1.0 6.1 MarR-family transcriptional regulator compare
CCNA_01655 +1.0 6.1 cyclophilin-type peptidylprolyl cis-trans isomerase compare
CCNA_02942 +1.0 3.5 nucleoside-diphosphate-sugar epimerase compare
CCNA_01055 +1.0 6.8 GT1 family glyscosyl transferase compare
CCNA_01679 +1.0 6.0 succinylglutamic semialdehyde dehydrogenase compare
CCNA_00946 +1.0 6.1 Basal-body rod modification protein FlgD compare
CCNA_01684 +1.0 5.5 phenylalanine-4-hydroxylase compare
CCNA_01221 +1.0 2.4 acyl carrier protein compare
CCNA_00149 +1.0 4.0 Cro/CI-family transcriptional regulator compare
CCNA_01724 +1.0 2.2 hypothetical protein compare
CCNA_03970 +1.0 2.7 hypothetical protein compare
CCNA_01116 +1.0 6.7 histidine protein kinase DivJ compare
CCNA_03514 +1.0 6.2 cytochrome c oxidase assembly protein ctaG compare
CCNA_00945 +1.0 6.9 chemotaxis protein MotD compare
CCNA_01552 +1.0 7.4 polar localization protein TipN compare
CCNA_03516 +1.0 6.1 protoheme IX farnesyltransferase coxE compare
CCNA_01541 +1.0 6.2 LysR-family transcriptional regulator compare
CCNA_00441 +1.0 6.0 chemotaxis receiver domain protein cheYI compare
CCNA_03519 +1.0 4.2 PadR-family transcriptional regulator compare
CCNA_03280 +1.0 8.8 pyruvate ferredoxin/flavodoxin oxidoreductase family protein compare
CCNA_01553 +1.0 5.1 undecaprenyl-phosphate beta-N-acetyl-D-fucosaminephosphotransferase compare
CCNA_01690 +1.0 3.6 MAPEG family membrane protein compare
CCNA_00354 +1.0 6.6 NlpC/P60 CHAP domain amidase protein compare


Specific Phenotypes

None in this experiment

For Caulobacter crescentus NA1000 in stress experiments

For stress Thallium(I) acetate across organisms