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  • Experiment set3IT024 for Pseudomonas fluorescens FW300-N1B4

    Compare to:

    LB with 5-Hydroxymethylfurfural 2.5 mM

    Group: stress
    Media: LB + 5-Hydroxymethylfurfural (2.5 mM)
    Culturing: pseudo1_N1B4_ML1, 48 well microplate; Tecan Infinite F200, Aerobic, at 26 (C), shaken=orbital
    By: Mark on 12/16/2014
    Media components: 10 g/L Tryptone, 5 g/L Yeast Extract, 5 g/L Sodium Chloride
    Growth plate: 1040 C7,C8

    Specific Phenotypes

    For 2 genes in this experiment

    For stress 5-Hydroxymethylfurfural in Pseudomonas fluorescens FW300-N1B4

    For stress 5-Hydroxymethylfurfural across organisms

    SEED Subsystems

    Subsystem #Specific
    Oxidative stress 1
    Transport of Zinc 1

    Metabolic Maps

    Color code by fitness: see overview map or list of maps.

    Maps containing gene(s) with specific phenotypes:

    • Ubiquinone and menaquinone biosynthesis
    • Histidine metabolism
    • Tyrosine metabolism
    • Tryptophan metabolism
    • Benzoxazinone biosynthesis
    • Naphthalene and anthracene degradation
    • Porphyrin and chlorophyll metabolism
    • Carotenoid biosynthesis - General
    • Phenylpropanoid biosynthesis
    • Flavonoid biosynthesis
    • Anthocyanin biosynthesis
    • Alkaloid biosynthesis I
    • Insect hormone biosynthesis
    • Biosynthesis of alkaloids derived from shikimate pathway