Experiment set3IT024 for Methanococcus maripaludis S2

Compare to:

H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE

200 most detrimental genes:

  gene name fitness t score description  
MMP_RS08940 +2.5 5.5 MetS family NSS transporter small subunit compare
MMP_RS08675 +2.4 10.0 class III signal peptide-containing protein compare
MMP_RS07330 +2.2 20.0 membrane protein compare
MMP_RS08860 +2.2 15.3 MinD/ParA family protein compare
MMP_RS08855 +2.2 14.1 hypothetical protein compare
MMP_RS01270 +2.2 18.9 prepilin peptidase compare
MMP_RS01085 +2.1 6.1 hypothetical protein compare
MMP_RS07115 +2.1 7.5 MBL fold metallo-hydrolase compare
MMP_RS00240 +2.1 17.1 type II secretion system F family protein compare
MMP_RS00245 +2.0 17.9 type II secretion system F family protein compare
MMP_RS01285 +2.0 16.5 hypothetical protein compare
MMP_RS01280 +2.0 15.7 DUF515 domain-containing protein compare
MMP_RS00250 +2.0 16.7 Flp pilus assembly complex ATPase component TadA compare
MMP_RS01290 +2.0 16.4 class III signal peptide-containing protein compare
MMP_RS01295 +2.0 14.5 hypothetical protein compare
MMP_RS01310 +1.9 16.8 hypothetical protein compare
MMP_RS01315 +1.9 17.3 DUF2341 domain-containing protein compare
MMP_RS05635 +1.9 12.3 NAD-dependent epimerase/dehydratase family protein compare
MMP_RS01305 +1.9 16.2 hypothetical protein compare
MMP_RS06035 +1.9 9.1 glycosyltransferase family 2 protein compare
MMP_RS03215 +1.8 12.8 MBL fold metallo-hydrolase compare
MMP_RS01275 +1.8 11.8 class III signal peptide-containing protein compare
MMP_RS05985 +1.8 3.4 hypothetical protein compare
MMP_RS09055 +1.7 2.7 CAP domain-containing protein compare
MMP_RS01195 +1.7 3.2 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS03125 +1.7 9.6 cell division ATPase MinD compare
MMP_RS08615 +1.5 2.3 flagellar protein G compare
MMP_RS03090 +1.5 6.8 cation:proton antiporter compare
MMP_RS01180 +1.4 4.1 XTP/dITP diphosphatase compare
MMP_RS01075 +1.3 2.1 hypothetical protein compare
MMP_RS05865 +1.3 1.9 hypothetical protein compare
MMP_RS00140 +1.2 7.0 DUF192 domain-containing protein compare
MMP_RS07135 +1.2 3.5 coenzyme F420 hydrogenase subunit beta compare
MMP_RS08275 +1.2 5.1 hypothetical protein compare
MMP_RS06015 +1.2 2.7 flavodoxin family protein compare
MMP_RS00535 +1.1 2.7 TIGR00375 family protein compare
MMP_RS08830 +1.1 4.1 GTP-binding protein compare
MMP_RS06600 +1.1 1.1 class III signal peptide-containing protein compare
MMP_RS03550 +1.1 1.6 DUF2124 domain-containing protein compare
MMP_RS08845 +1.1 5.1 archaellum operon transcriptional activator EarA family protein compare
MMP_RS00345 +1.1 5.2 DUF2666 domain-containing protein compare
MMP_RS07900 +1.1 2.3 YeeE/YedE family protein compare
MMP_RS05965 +1.1 1.5 carboxymuconolactone decarboxylase family protein compare
MMP_RS06175 +1.0 6.3 winged helix-turn-helix transcriptional regulator compare
MMP_RS05975 +1.0 1.9 hypothetical protein compare
MMP_RS09045 +1.0 6.4 class III signal peptide-containing protein compare
MMP_RS08400 +1.0 1.7 MJ0307 family thioredoxin compare
MMP_RS00570 +1.0 1.1 protein-L-isoaspartate O-methyltransferase compare
MMP_RS01790 +1.0 3.0 restriction endonuclease compare
MMP_RS05580 +1.0 7.2 glycosyltransferase compare
MMP_RS00530 +0.9 3.0 tRNA pseudouridine(54/55) synthase Pus10 compare
MMP_RS08580 +0.9 2.5 flagellin compare
MMP_RS08290 +0.9 4.0 DNA-binding protein Alba compare
MMP_RS04410 +0.9 2.1 hypothetical protein compare
MMP_RS01255 +0.9 2.5 amino acid ABC transporter ATP-binding protein compare
MMP_RS06760 +0.8 1.8 hypothetical protein compare
MMP_RS01125 +0.8 2.9 thioredoxin family protein compare
MMP_RS08775 +0.8 3.4 methanogenesis marker 9 domain-containing protein compare
MMP_RS04125 +0.8 2.1 TetR/AcrR family transcriptional regulator compare
MMP_RS07125 +0.8 3.2 coenzyme F420-reducing hydrogenase FrhD protein compare
MMP_RS08215 +0.7 2.4 DUF483 domain-containing protein compare
MMP_RS00390 +0.7 3.5 ammonium transporter compare
MMP_RS08850 +0.7 5.7 hypothetical protein compare
MMP_RS02530 +0.7 2.4 type II toxin-antitoxin system mRNA interferase toxin RelE/StbE family compare
MMP_RS08750 +0.7 0.8 hypothetical protein compare
MMP_RS03625 +0.7 2.3 cell wall-binding protein compare
MMP_RS07345 +0.7 1.9 glycine synthesis protein GlyXL (from data) compare
MMP_RS03080 +0.7 1.1 universal stress protein compare
MMP_RS01870 +0.7 2.5 acyl-CoA dehydratase activase compare
MMP_RS07130 +0.7 2.7 coenzyme F420 hydrogenase subunit gamma compare
MMP_RS03535 +0.7 1.1 helix-turn-helix transcriptional regulator compare
MMP_RS05970 +0.7 2.6 class II SORL domain-containing protein compare
MMP_RS03320 +0.7 1.2 metal-dependent transcriptional regulator compare
MMP_RS08410 +0.7 1.8 DUF169 domain-containing protein compare
MMP_RS08455 +0.6 2.4 multiprotein bridging factor aMBF1 compare
MMP_RS02545 +0.6 1.4 hypothetical protein compare
MMP_RS07120 +0.6 3.2 coenzyme F420 hydrogenase subunit alpha compare
MMP_RS05785 +0.6 4.1 ATP-binding protein compare
MMP_RS06140 +0.6 1.8 radical SAM protein compare
MMP_RS05990 +0.6 1.8 DsrE family protein compare
MMP_RS04255 +0.6 2.2 coenzyme F420 hydrogenase subunit beta compare
MMP_RS00655 +0.6 1.9 hypothetical protein compare
MMP_RS05995 +0.6 3.5 FprA family A-type flavoprotein compare
MMP_RS02020 +0.6 1.4 gamma-glutamylcyclotransferase compare
MMP_RS04610 +0.6 1.7 Dabb family protein compare
MMP_RS07800 +0.6 2.1 ATP-binding cassette domain-containing protein compare
MMP_RS08280 +0.6 1.8 proteasome assembly chaperone family protein compare
MMP_RS01630 +0.6 3.0 N-glycosylase/DNA lyase compare
MMP_RS08665 +0.6 4.4 hypothetical protein compare
MMP_RS01650 +0.6 0.5 sulfurtransferase TusA family protein compare
MMP_RS06445 +0.6 1.9 DUF89 domain-containing protein compare
MMP_RS08405 +0.6 3.2 MFS transporter compare
MMP_RS06090 +0.6 2.3 iron ABC transporter permease compare
MMP_RS08265 +0.5 2.7 rubrerythrin compare
MMP_RS08770 +0.5 2.4 hypothetical protein compare
MMP_RS06200 +0.5 2.0 M24 family metallopeptidase compare
MMP_RS02230 +0.5 3.0 sodium-dependent transporter compare
MMP_RS00395 +0.5 1.0 MGMT family protein compare
MMP_RS00965 +0.5 0.8 hypothetical protein compare
MMP_RS01110 +0.5 0.9 FmdE family protein compare
MMP_RS02425 +0.5 1.5 hypothetical protein compare
MMP_RS07570 +0.5 2.5 nucleotidyltransferase family protein compare
MMP_RS00905 +0.5 1.4 phenylacetate--CoA ligase compare
MMP_RS08380 +0.5 2.7 phosphatase PAP2 family protein compare
MMP_RS03340 +0.5 0.5 ABC transporter ATP-binding protein compare
MMP_RS01490 +0.5 1.4 tetratricopeptide repeat protein compare
MMP_RS01660 +0.5 1.0 hypothetical protein compare
MMP_RS05490 +0.5 2.3 IMPACT family protein compare
MMP_RS01135 +0.5 2.6 molybdate ABC transporter substrate-binding protein compare
MMP_RS01185 +0.5 1.8 hypothetical protein compare
MMP_RS08080 +0.5 1.7 YchF/TatD family DNA exonuclease compare
MMP_RS06385 +0.5 1.2 hypothetical protein compare
MMP_RS06170 +0.5 2.1 ABC transporter ATP-binding protein compare
MMP_RS08390 +0.5 2.1 DUF5400 domain-containing protein compare
MMP_RS07910 +0.5 2.5 NAD(P)H-hydrate dehydratase compare
MMP_RS06860 +0.5 1.0 4Fe-4S binding protein compare
MMP_RS08385 +0.5 1.5 ABC transporter substrate-binding protein compare
MMP_RS07805 +0.5 2.2 ABC transporter permease compare
MMP_RS08395 +0.5 1.3 DsrE family protein compare
MMP_RS01570 +0.5 0.8 hypothetical protein compare
MMP_RS01320 +0.5 1.6 hypothetical protein compare
MMP_RS00690 +0.5 1.7 MBL fold metallo-hydrolase compare
MMP_RS07705 +0.5 1.8 transcriptional regulator compare
MMP_RS05980 +0.5 2.6 ferritin compare
MMP_RS01685 +0.5 1.5 indolepyruvate oxidoreductase subunit beta compare
MMP_RS06325 +0.5 0.7 hypothetical protein compare
MMP_RS04055 +0.5 0.8 hypothetical protein compare
MMP_RS01450 +0.5 2.2 tRNA pseudouridine(38-40) synthase TruA compare
MMP_RS07850 +0.4 1.4 prephenate dehydratase compare
MMP_RS08610 +0.4 2.6 flagellar protein F compare
MMP_RS02540 +0.4 1.2 DUF2283 domain-containing protein compare
MMP_RS03420 +0.4 1.7 acetolactate synthase small subunit compare
MMP_RS07335 +0.4 1.7 tRNA (cytidine(56)-2'-O)-methyltransferase compare
MMP_RS01635 +0.4 2.1 thiamine pyrophosphate-dependent enzyme compare
MMP_RS05715 +0.4 1.5 hypothetical protein compare
MMP_RS01675 +0.4 0.8 hypothetical protein compare
MMP_RS08640 +0.4 3.2 TIM barrel protein compare
MMP_RS07840 +0.4 1.3 ribonuclease III compare
MMP_RS08285 +0.4 1.8 serine/threonine protein kinase compare
MMP_RS00710 +0.4 1.2 hypothetical protein compare
MMP_RS03495 +0.4 1.8 Na/Pi cotransporter family protein compare
MMP_RS05960 +0.4 2.4 CoB--CoM heterodisulfide reductase subunit B compare
MMP_RS08490 +0.4 2.9 hypothetical protein compare
MMP_RS07905 +0.4 1.4 DUF3343 domain-containing protein compare
MMP_RS06050 +0.4 1.4 ZIP family metal transporter compare
MMP_RS00480 +0.4 1.5 hypothetical protein compare
MMP_RS07155 +0.4 2.3 MFS transporter compare
MMP_RS01300 +0.4 3.2 hypothetical protein compare
MMP_RS06680 +0.4 2.6 Coenzyme F420 hydrogenase/dehydrogenase beta subunit C-terminal domain compare
MMP_RS04220 +0.4 2.1 queuosine precursor transporter compare
MMP_RS05355 +0.4 0.4 hypothetical protein compare
MMP_RS06095 +0.4 1.7 ABC transporter ATP-binding protein compare
MMP_RS04995 +0.4 1.7 hypothetical protein compare
MMP_RS02955 +0.4 1.5 DJ-1/PfpI family protein compare
MMP_RS02215 +0.4 2.3 ECF transporter S component compare
MMP_RS08980 +0.4 1.1 hypothetical protein compare
MMP_RS07985 +0.4 2.5 nitroreductase family protein compare
MMP_RS03305 +0.4 1.8 winged helix-turn-helix domain-containing protein compare
MMP_RS05685 +0.4 1.3 winged helix-turn-helix domain-containing protein compare
MMP_RS00990 +0.4 1.2 hypothetical protein compare
MMP_RS02320 +0.4 1.9 glutamate-cysteine ligase family protein compare
MMP_RS08930 +0.4 0.5 hypothetical protein compare
MMP_RS06465 +0.4 2.1 NERD domain-containing protein compare
MMP_RS02630 +0.4 1.7 rubredoxin compare
MMP_RS06115 +0.4 1.8 class II aldolase/adducin family protein compare
MMP_RS03120 +0.4 0.8 hypothetical protein compare
MMP_RS08480 +0.4 2.3 molybdate ABC transporter substrate-binding protein compare
MMP_RS06100 +0.4 2.0 GNAT family N-acetyltransferase compare
MMP_RS08240 +0.4 1.2 methanogenesis marker 16 metalloprotein compare
MMP_RS02625 +0.4 1.2 ribonuclease H-like domain-containing protein compare
MMP_RS07855 +0.4 1.8 class I SAM-dependent methyltransferase compare
MMP_RS00665 +0.4 1.5 hypothetical protein compare
MMP_RS03060 +0.4 1.1 MBL fold metallo-hydrolase compare
MMP_RS00385 +0.4 1.8 P-II family nitrogen regulator compare
MMP_RS01655 +0.4 0.7 DsrE family protein compare
MMP_RS03585 +0.3 1.2 Hsp20/alpha crystallin family protein compare
MMP_RS07365 +0.3 2.2 2-phosphoglycerate kinase compare
MMP_RS08655 +0.3 2.2 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS06970 +0.3 1.3 ribosomal protein S18-alanine N-acetyltransferase compare
MMP_RS04290 +0.3 1.1 4Fe-4S binding protein compare
MMP_RS07590 +0.3 2.3 hypothetical protein compare
MMP_RS02610 +0.3 0.7 DUF2162 domain-containing protein compare
MMP_RS08230 +0.3 1.3 50S ribosomal protein L11 methyltransferase compare
MMP_RS02255 +0.3 1.2 hypothetical protein compare
MMP_RS01775 +0.3 0.8 TIGR00297 family protein compare
MMP_RS00400 +0.3 1.3 tributyrin esterase compare
MMP_RS08250 +0.3 1.4 pyruvate kinase compare
MMP_RS08160 +0.3 1.7 EamA family transporter compare
MMP_RS00235 +0.3 1.3 HDIG domain-containing protein compare
MMP_RS04030 +0.3 1.1 hypothetical protein compare
MMP_RS05325 +0.3 1.1 hypothetical protein compare
MMP_RS06965 +0.3 1.5 TIGR04014 family B12-binding domain/radical SAM domain-containing protein compare
MMP_RS04600 +0.3 2.4 tetratricopeptide repeat protein compare
MMP_RS06665 +0.3 1.3 glycogen/starch synthase compare
MMP_RS08205 +0.3 1.8 stage II sporulation protein M compare
MMP_RS06250 +0.3 1.3 hypothetical protein compare
MMP_RS00285 +0.3 1.5 TIGR04013 family B12-binding domain/radical SAM domain-containing protein compare
MMP_RS06575 +0.3 1.4 fluoride efflux transporter CrcB compare
MMP_RS00455 +0.3 1.5 orotate phosphoribosyltransferase-like protein compare
MMP_RS04990 +0.3 1.1 aquaporin family protein compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis S2 in nutrient t2 experiments

For nutrient t2 Sodium acetate across organisms