Experiment set3IT024 for Herbaspirillum seropedicae SmR1

L-Rhamnose monohydrate carbon source

Group: carbon source
Media: NFbHP_noCarbon + L-Rhamnose monohydrate (5 g/L), pH=6.5
Culturing: HerbieS_ML4, flask, Aerobic, at 30 (C), shaken=120 rpm
Growth: about 5.4 generations
By: Thalita Tuleski on 19-May-16

Specific Phenotypes

For 7 genes in this experiment

For carbon source L-Rhamnose monohydrate in Herbaspirillum seropedicae SmR1

For carbon source L-Rhamnose monohydrate across organisms

SEED Subsystems

Subsystem	#Specific
L-rhamnose utilization	7

Metabolic Maps

Color code by fitness: see overview map or list of maps.

Maps containing gene(s) with specific phenotypes:

• Pentose and glucuronate interconversions
• Fructose and mannose metabolism
• Galactose metabolism
• Inositol phosphate metabolism
• Biosynthesis of ansamycins

MetaCyc Pathways

Pathways that contain genes with specific phenotypes:

Pathway	#Steps	#Present	#Specific
L-rhamnose degradation I	5	4	2
superpathway of fucose and rhamnose degradation	12	6	2