Experiment set3IT024 for Caulobacter crescentus NA1000

Compare to:

PYE with Paraquat dichloride 0.03 mg/ml

200 most detrimental genes:

  gene name fitness t score description  
CCNA_03858 +5.5 31.3 protein translocase subunit secB compare
CCNA_02037 +5.5 36.1 ATP-dependent endopeptidase Lon compare
CCNA_00011 +5.1 7.9 chaperone protein DnaJ compare
CCNA_00296 +4.8 34.8 phosphate regulon response regulator PhoB compare
CCNA_02030 +4.6 12.9 hypothetical protein compare
CCNA_02028 +4.4 11.4 NTF2 superfamily protein compare
CCNA_01525 +4.2 17.0 flagellar biosynthesis repressor flbT compare
CCNA_01059 +4.1 17.1 S-layer protein rsaA compare
CCNA_01583 +3.8 9.2 phosphate-binding protein compare
CCNA_02448 +3.8 22.0 hypothetical protein compare
CCNA_02447 +3.6 20.5 PspA/IM30 family regulatory protein compare
CCNA_01815 +3.5 22.9 nitrogen assimilation regulatory protein NtrC compare
CCNA_01061 +3.5 12.9 type I secretion adaptor protein RsaE compare
CCNA_01060 +3.4 21.1 type I protein secretion ATP-binding protein RsaD compare
CCNA_02026 +3.4 16.9 hypothetical protein compare
CCNA_00389 +3.4 4.8 aminomethyltransferase family protein compare
CCNA_02328 +3.3 2.6 cell cycle regulatory protein GcrA compare
CCNA_03643 +3.2 6.0 succinate dehydrogenase membrane anchor subunit compare
CCNA_00497 +3.1 17.1 putative rhamnosyl transferase compare
CCNA_02553 +3.1 20.2 ATP-dependent clp protease ATP-binding subunit ClpA compare
CCNA_00292 +3.0 7.1 phosphate transport system permease protein pstC compare
CCNA_00013 +3.0 24.8 protein-PII uridylyltransferase compare
CCNA_01199 +3.0 16.4 glucose-1-phosphate thymidylyltransferase compare
CCNA_03689 +3.0 15.2 alanine dehydrogenase compare
CCNA_03043 +2.9 9.6 type IV pilin protein pilA compare
CCNA_01968 +2.9 7.1 pentapeptide repeats containing protein compare
CCNA_03863 +2.9 7.6 hypothetical protein compare
CCNA_01553 +2.9 13.6 undecaprenyl-phosphate beta-N-acetyl-D-fucosaminephosphotransferase compare
CCNA_00756 +2.9 5.2 hypothetical protein compare
CCNA_01712 +2.8 19.3 CopY/TcrY family transcriptional repressor compare
CCNA_02576 +2.8 18.2 phosphoribosylamidoimidazole-succinocarboxamide synthase compare
CCNA_03961 +2.8 9.8 hypothetical protein compare
CCNA_00846 +2.8 22.4 proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase compare
CCNA_00872 +2.8 7.6 glutaredoxin compare
CCNA_02419 +2.7 9.3 TonB1 protein compare
CCNA_03824 +2.7 17.7 2-polyprenylphenol 6-hydroxylase accessory protein UbiB compare
CCNA_00769 +2.7 12.0 TetR family transcriptional regulator compare
CCNA_01964 +2.7 6.2 NADH dehydrogenase compare
CCNA_02957 +2.7 10.4 ArsR-family transcriptional regulator compare
CCNA_01814 +2.7 16.9 nitrogen regulation protein ntrB compare
CCNA_02552 +2.7 6.6 ATP-dependent Clp protease adaptor protein ClpS compare
CCNA_02242 +2.7 16.5 PHB granule-associated protein, phasin2 compare
CCNA_02646 +2.6 3.7 cell division protein MraZ compare
CCNA_01453 +2.6 8.9 electron transport complex I subunit, NADH-ubiquinone oxidoreductase compare
CCNA_02339 +2.6 15.1 methyltransferase compare
CCNA_03612 +2.6 17.4 HTH XRE-family transcriptional regulator compare
CCNA_02225 +2.6 16.4 ArsR family/SAM-dependent transcriptional regulator compare
CCNA_03271 +2.6 18.1 methionine gamma-lyase compare
CCNA_01851 +2.6 19.0 quinol cytochrome oxidase polypeptide II compare
CCNA_02575 +2.5 6.3 hypothetical protein compare
CCNA_00264 +2.5 14.0 C4-dicarboxylate transport protein compare
CCNA_02732 +2.5 4.2 hypothetical protein compare
CCNA_01237 +2.5 1.7 hypothetical protein compare
CCNA_00521 +2.5 4.3 antitoxin protein compare
CCNA_01780 +2.5 17.2 exopolyphosphatase compare
CCNA_02103 +2.5 12.1 hypothetical protein compare
CCNA_01393 +2.5 16.9 soluble lytic murein transglycosylase compare
CCNA_03129 +2.5 15.9 peptidoglycan-specific endopeptidase, M23 family compare
CCNA_01763 +2.5 14.0 multifunctional aminopeptidase compare
CCNA_02941 +2.5 8.8 transcription elongation factor greA compare
CCNA_00699 +2.4 13.2 LSU ribosomal protein L28P compare
CCNA_02619 +2.4 17.2 stomatin/prohibitin-related protein compare
CCNA_02980 +2.4 15.5 tryptophan 2,3-dioxygenase compare
CCNA_02021 +2.4 8.5 hypothetical protein compare
CCNA_00161 +2.4 16.1 hypothetical protein compare
CCNA_02025 +2.4 9.2 hypothetical protein compare
CCNA_03030 +2.4 14.5 cytochrome c2 compare
CCNA_03808 +2.4 16.1 organic solvent resistance transport system Ttg2C protein compare
CCNA_03289 +2.4 12.7 HicB-family RNA-binding protein compare
CCNA_03681 +2.3 13.7 ABC transporter ATP-binding protein compare
CCNA_03062 +2.3 13.5 cell wall hydrolase family protein compare
CCNA_01058 +2.3 10.7 helix-turn-helix transcriptional regulator compare
CCNA_00215 +2.3 12.5 SapC surface layer protein compare
CCNA_00162 +2.3 11.4 hypothetical protein compare
CCNA_03108 +2.3 17.9 TonB-dependent outer membrane receptor compare
CCNA_03557 +2.3 8.6 hypothetical protein compare
CCNA_01751 +2.2 9.6 aminodeoxychorismate lyase compare
CCNA_02324 +2.2 12.2 heat shock protein 33 hsp33 compare
CCNA_00392 +2.2 14.7 dihydroorotase compare
CCNA_00072 +2.2 12.7 hypothetical protein compare
CCNA_00924 +2.2 10.9 MarR/EmrR family transcriptional regulator compare
CCNA_00781 +2.2 15.4 two-component receiver protein CpdR compare
CCNA_01242 +2.2 14.8 amino acid permease compare
CCNA_01995 +2.2 1.7 phosphatidate cytidylyltransferase compare
CCNA_02387 +2.2 15.4 glutathione reductase compare
CCNA_01295 +2.2 13.7 integral membrane protein compare
CCNA_01931 +2.2 13.5 TetR-family transcriptional regulator compare
CCNA_02416 +2.1 12.3 DNA-binding protein HU compare
CCNA_03252 +2.1 15.1 CopY/TcrY-family transcriptional regulator compare
CCNA_03064 +2.1 10.3 PadR-family transcriptional regulator compare
CCNA_00518 +2.1 8.8 LSU ribosomal protein L25P compare
CCNA_03807 +2.1 10.9 organic solvent resistance transport system Ttg2D protein compare
CCNA_01181 +2.1 12.1 hypothetical protein compare
CCNA_00920 +2.1 6.1 hypothetical protein compare
CCNA_00073 +2.1 14.8 HemY domain membrane protein compare
CCNA_00079 +2.1 7.6 MerR-family transcriptional regulator compare
CCNA_01086 +2.1 13.1 GTP-binding protein lepA compare
CCNA_01573 +2.1 9.9 ArsR-family transcriptional regulator compare
CCNA_02081 +2.0 7.6 Sec-independent protein translocase protein tatB compare
CCNA_01643 +2.0 10.1 arginine-tRNA-protein transferase compare
CCNA_00032 +2.0 5.8 antitoxin protein VapB compare
CCNA_03680 +2.0 17.2 aminopeptidase N compare
CCNA_01008 +2.0 14.6 urocanate hydratase compare
CCNA_03806 +2.0 13.7 outer membrane lipoprotein compare
CCNA_03325 +2.0 9.1 hypothetical protein compare
CCNA_01979 +2.0 6.1 LexA repressor compare
CCNA_03805 +2.0 10.1 PadR-family transcriptional regulator compare
CCNA_00153 +2.0 4.5 adenine nucleotide exchange factor GrpE compare
CCNA_03280 +2.0 17.3 pyruvate ferredoxin/flavodoxin oxidoreductase family protein compare
CCNA_01840 +2.0 15.1 MerR-family transcriptional regulator compare
CCNA_03740 +2.0 8.6 cysteine synthase compare
CCNA_01006 +2.0 8.9 flagellar hook-basal body complex protein FliE compare
CCNA_02330 +1.9 7.1 hypothetical protein compare
CCNA_02644 +1.9 5.4 cell division protein FtsL compare
CCNA_00031 +1.9 10.5 toxin protein VapC compare
CCNA_03519 +1.9 10.1 PadR-family transcriptional regulator compare
CCNA_02287 +1.9 9.4 TetR-family transcriptional regulator compare
CCNA_03954 +1.9 2.6 hypothetical protein compare
CCNA_03287 +1.9 9.7 PadR-family transcriptional regulator compare
CCNA_02171 +1.9 12.5 nucleoside permease nupC compare
CCNA_03989 +1.9 14.7 MarR-family HTH transcriptional regulator / N-acyltransferase compare
CCNA_00512 +1.9 7.4 GTP-binding protein, probable translation factor compare
CCNA_01506 +1.9 7.6 cystine transport ATP-binding protein compare
CCNA_02567 +1.9 12.3 sensory transduction histidine kinase pleC compare
CCNA_01959 +1.9 4.0 3-dehydroquinate dehydratase compare
CCNA_01596 +1.9 4.7 DNA helicase II compare
CCNA_03136 +1.9 5.9 flagellar export protein FliJ compare
CCNA_02000 +1.9 2.4 SSU ribosomal protein S2P compare
CCNA_R0037 +1.9 6.2 tRNA-Glu compare
CCNA_00939 +1.8 8.3 MarR-family transcriptional regulator compare
CCNA_00149 +1.8 6.8 Cro/CI-family transcriptional regulator compare
CCNA_02199 +1.8 13.0 methyltransferase compare
CCNA_03936 +1.8 6.3 hypothetical protein compare
CCNA_00447 +1.8 10.8 chemotaxis protein cheD compare
CCNA_00459 +1.8 10.4 Na+/H+ antiporter nhaA compare
CCNA_03810 +1.8 11.7 organic solvent resistance transport system ATP-binding protein compare
CCNA_01593 +1.8 10.1 Xaa-pro aminopeptidase compare
CCNA_01801 +1.8 8.1 hypothetical protein compare
CCNA_00562 +1.8 11.3 dihydroorotate dehydrogenase compare
CCNA_00950 +1.8 12.6 flagellar M-ring protein FliF compare
CCNA_00999 +1.8 8.0 PAS-family motility and cell cycle regulatory protein MopJ compare
CCNA_01624 +1.8 5.6 orotate phosphoribosyltransferase compare
CCNA_01926 +1.8 8.6 GGDEF diguanylate cyclase DgcB compare
CCNA_01526 +1.8 6.6 flagellar biosynthesis regulatory protein flaF compare
CCNA_02591 +1.8 7.8 glutaredoxin compare
CCNA_02534 +1.8 3.1 hypothetical protein compare
CCNA_01826 +1.8 9.5 vitamin B12 receptor compare
CCNA_03401 +1.8 7.7 conserved hypothetical cytosolic protein compare
CCNA_00078 +1.7 13.0 acyl-CoA dehydrogenase compare
CCNA_01507 +1.7 7.1 cystine transport system permease protein compare
CCNA_00035 +1.7 10.0 tRNA pseudouridine synthase B compare
CCNA_01011 +1.7 8.4 imidazolonepropionase compare
CCNA_00505 +1.7 8.7 ubiquinol-cytochrome c reductase iron-sulfur subunit compare
CCNA_01913 +1.7 9.7 MarR-family transcriptional regulator compare
CCNA_00368 +1.7 10.3 phosphonates transport system permease protein phnE compare
CCNA_03012 +1.7 7.6 peroxiredoxin compare
CCNA_01361 +1.7 3.4 PepSY superfamily protein compare
CCNA_03105 +1.7 8.2 DnaJ domain protein compare
CCNA_01508 +1.7 7.8 cystine-binding protein compare
CCNA_03316 +1.7 11.1 UDP-N-acetylglucosamine 4,6-dehydratase/UDP-D-quinovosamine 4-dehydrogenase compare
CCNA_01175 +1.7 7.0 uroporphyrin-III C-methyltransferase compare
CCNA_00043 +1.7 5.6 N utilization substance protein A NusA compare
CCNA_03479 +1.7 9.7 MarR-family transcriptional regulator compare
CCNA_02073 +1.7 6.5 cupin domain transcriptional regulator compare
CCNA_01164 +1.7 10.7 O-linked N-acetylglucosamine transferase compare
CCNA_02614 +1.7 9.4 fumarylacetoacetase superfamily protein compare
CCNA_00953 +1.7 5.4 flagellar motor switch protein FliN compare
CCNA_02617 +1.7 12.9 histidinol-phosphate aminotransferase compare
CCNA_03215 +1.7 11.3 ARO8 family aminotransferase/HTH DNA-binding protein compare
CCNA_01918 +1.7 8.9 cyclic di-GMP effector protein PopA compare
CCNA_02910 +1.6 14.1 TonB-dependent receptor compare
CCNA_02243 +1.6 11.8 D-alanyl-D-alanine serine-type carboxypeptidase compare
CCNA_02551 +1.6 4.8 hypothetical protein compare
CCNA_01848 +1.6 8.8 quinol cytochrome oxidase polypeptide IV compare
CCNA_00210 +1.6 13.2 TonB-dependent receptor compare
CCNA_03123 +1.6 9.0 ArsR-family transcriptional regulator compare
CCNA_00527 +1.6 9.6 hypothetical protein compare
CCNA_03748 +1.6 7.1 dTDP-4-dehydrorhamnose 3,5-epimerase compare
CCNA_01739 +1.6 7.6 LSU ribosomal protein L9P compare
CCNA_00752 +1.6 10.1 3-hydroxybutyryl-CoA dehydrogenase compare
CCNA_01186 +1.6 6.5 hypothetical protein compare
CCNA_01655 +1.6 8.4 cyclophilin-type peptidylprolyl cis-trans isomerase compare
CCNA_03940 +1.6 2.1 hypothetical protein compare
CCNA_01850 +1.6 10.6 quinol cytochrome oxidase polypeptide I compare
CCNA_02866 +1.6 5.7 hypothetical protein compare
CCNA_00291 +1.6 9.0 phosphate regulon sensor protein phoR compare
CCNA_00047 +1.6 8.7 tRNA m7-G46 methyltransferase compare
CCNA_00147 +1.6 2.7 hypothetical protein compare
CCNA_03614 +1.6 7.2 hypothetical protein compare
CCNA_02616 +1.6 11.1 4-hydroxyphenylpyruvate dioxygenase compare
CCNA_03205 +1.6 10.6 M28-family zinc peptidase compare
CCNA_00895 +1.6 6.1 hypothetical protein compare
CCNA_01094 +1.6 4.2 hypothetical protein compare
CCNA_03718 +1.6 10.4 NADH-ubiquinone oxidoreductase subunit compare
CCNA_01020 +1.5 8.9 LacI-family transcriptional regulator compare
CCNA_01528 +1.5 9.3 flagellin fljK compare
CCNA_00441 +1.5 8.0 chemotaxis receiver domain protein cheYI compare
CCNA_00443 +1.5 7.4 chemotaxis protein cheW compare
CCNA_03089 +1.5 8.5 hypothetical protein compare
CCNA_01580 +1.5 5.7 M15 superfamily membrane peptidase compare


Specific Phenotypes

For 7 genes in this experiment

For stress Paraquat dichloride in Caulobacter crescentus NA1000

For stress Paraquat dichloride across organisms