Experiment set3IT024 for Caulobacter crescentus NA1000

PYE with Paraquat dichloride 0.03 mg/ml

Group: stress
Media: PYE + Paraquat dichloride (0.03 mg/ml)
Culturing: Caulo_ML2, 24-well transparent microplate; Multitron, Aerobic, at 30 (C), shaken=700 rpm
Growth: about 3.9 generations
By: Adam on 1-May-17
Media components: 2 g/L Bacto Peptone, 1 g/L Yeast Extract, 0.8 mM Magnesium sulfate, 0.5 mM Calcium chloride
Growth plate: 1706 C2

Specific Phenotypes

For 7 genes in this experiment

For stress Paraquat dichloride in Caulobacter crescentus NA1000

For stress Paraquat dichloride across organisms

SEED Subsystems

Subsystem	#Specific
Control of cell elongation - division cycle in Bacilli	1
DNA Repair Base Excision	1
Glutathione: Biosynthesis and gamma-glutamyl cycle	1
Utilization of glutathione as a sulphur source	1

Metabolic Maps

Color code by fitness: see overview map or list of maps.

Maps containing gene(s) with specific phenotypes:

• Taurine and hypotaurine metabolism
• Selenoamino acid metabolism
• Cyanoamino acid metabolism
• Glutathione metabolism
• Arachidonic acid metabolism

MetaCyc Pathways

Pathways that contain genes with specific phenotypes:

Pathway	#Steps	#Present	#Specific
glutathione degradation (DUG pathway)	2	1	1
peptido-conjugates in tissue regeneration biosynthesis	17	6	3
γ-glutamyl cycle	6	4	1
leukotriene biosynthesis	6	2	1
hypoglycin biosynthesis	14	4	1