Experiment set3IT022 for Sinorhizobium meliloti 1021

Compare to:

Gelatin nitrogen source

200 most important genes:

  gene name fitness t score description  
SMc00619 -5.4 -2.5 hypothetical protein compare
SMc00236 -5.4 -6.3 Indole-3-glycerol phosphate synthase compare
SMc00917 -5.3 -5.4 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
SMc00235 -5.2 -9.0 anthranilate phosphoribosyltransferase compare
SMc02767 -5.2 -8.8 N-(5'-phosphoribosyl)anthranilate isomerase compare
SMa1635 -5.1 -1.7 hypothetical protein compare
SMc02909 -5.1 -2.3 transglycosylase transmembrane protein compare
SMc02544 -4.8 -1.1 hypothetical protein compare
SMc01431 -4.8 -18.8 acetolactate synthase 3 catalytic subunit compare
SMc02765 -4.7 -11.8 tryptophan synthase subunit alpha compare
SMc01569 -4.7 -1.5 carbamoyl phosphate synthase small subunit compare
SMc03850 -4.7 -1.5 heme exporter D (cytochrome C-type biogenesis protein) transmembrane compare
SMc00711 -4.6 -4.0 cyclohexadienyl dehydrogenase compare
SMc02569 -4.5 -3.8 imidazole glycerol phosphate synthase subunit HisF compare
SMc04001 -4.3 -1.0 phosphoribosylaminoimidazole carboxylase catalytic subunit protein compare
SMc02766 -4.3 -15.2 tryptophan synthase subunit beta compare
SMc04045 -4.2 -10.0 dihydroxy-acid dehydratase compare
SMc02725 -4.1 -11.5 anthranilate synthase compare
SMc03795 -3.9 -1.3 isopropylmalate isomerase small subunit compare
SMc02147 -3.9 -8.3 phosphate regulon sensor histidine kinase transmembrane protein compare
SMc01850 -3.8 -4.0 hypothetical protein compare
SMc01361 -3.7 -6.3 dihydroorotase compare
SMc02144 -3.7 -5.1 phosphate ABC transporter permease compare
SMc00017 -3.7 -1.2 homoserine kinase compare
SMc03763 -3.6 -4.3 cytosine-specific methyltransferase compare
SMc02145 -3.6 -1.2 signal peptide protein compare
SMc02142 -3.6 -7.1 phosphate transporter ATP-binding protein compare
SM_b20948 -3.6 -2.0 glucosyltransferase compare
SMc02717 -3.5 -15.2 2-isopropylmalate synthase compare
SMc02166 -3.5 -9.2 dihydroorotase compare
SMc02245 -3.3 -7.1 dihydroorotate dehydrogenase 2 compare
SMc02363 -3.3 -4.3 cytochrome C-type biogenesis transmembrane protein compare
SMc03878 -3.3 -4.2 acetoacetyl-CoA reductase compare
SMc04346 -3.2 -5.0 ketol-acid reductoisomerase compare
SMc02858 -3.2 -1.3 chaperone protein DnaJ compare
SMc00918 -3.2 -7.5 ATP phosphoribosyltransferase regulatory subunit compare
SMc04002 -3.0 -4.5 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
SMc04296 -3.0 -1.4 cell division protein FtsZ compare
SMc00815 -3.0 -1.7 inosine 5'-monophosphate dehydrogenase compare
SMc02140 -2.9 -2.4 phosphate regulon transcriptional regulatory protein compare
SMc02570 -2.8 -5.4 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
SMc02165 -2.8 -7.0 orotate phosphoribosyltransferase compare
SMc00494 -2.8 -1.9 phosphoribosylformylglycinamidine synthase subunit PurS compare
SMc00614 -2.7 -6.5 phosphoribosylglycinamide formyltransferase compare
SMc01215 -2.7 -5.0 carbamoyl phosphate synthase large subunit compare
SMc00993 -2.6 -8.9 phosphoribosylamine--glycine ligase compare
SMc04405 -2.6 -8.6 3-isopropylmalate dehydrogenase compare
SMc02572 -2.6 -2.3 imidazole glycerol phosphate synthase subunit HisH compare
SMc01147 -2.5 -4.1 coproporphyrinogen III oxidase compare
SMc00963 -2.5 -3.8 hypothetical protein compare
SMc01004 -2.5 -6.0 phosphoribosyl-AMP cyclohydrolase compare
SMc01360 -2.4 -3.1 aspartate carbamoyltransferase catalytic subunit compare
SMc00982 -2.4 -5.2 dioxygenase compare
SMc04026 -2.4 -7.5 glutamate synthase compare
SMc00412 -2.4 -3.2 orotidine 5'-phosphate decarboxylase compare
SMc00295 -2.4 -0.8 hypothetical protein compare
SM_b20758 -2.4 -3.5 ArsR family transcriptional regulator compare
SMc00293 -2.4 -7.6 homoserine dehydrogenase compare
SMc03823 -2.4 -9.5 isopropylmalate isomerase large subunit compare
SMc00615 -2.3 -6.8 phosphoribosylaminoimidazole synthetase compare
SMc02451 -2.2 -1.9 hypothetical protein compare
SMc02143 -2.2 -3.4 phosphate ABC transporter permease compare
SMc00914 -2.2 -6.8 oxidoreductase compare
SM_b20966 -2.2 -10.0 beta-galactosidase compare
SMc02234 -2.2 -2.2 hypothetical protein compare
SMc00981 -2.2 -6.0 ferredoxin protein compare
SMc04028 -2.2 -12.3 glutamate synthase compare
SMc00495 -2.1 -4.3 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
SM_b21679 -2.1 -1.6 hypothetical protein compare
SMc04088 -2.1 -6.5 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
SMc02899 -2.0 -7.7 prephenate dehydratase compare
SMc03100 -2.0 -1.0 hypothetical protein compare
SMc01494 -2.0 -9.5 phosphoserine phosphatase compare
SMc01880 -2.0 -2.3 pantoate--beta-alanine ligase compare
SMc01342 -2.0 -4.4 hypothetical protein compare
SMc00488 -1.9 -10.6 phosphoribosylformylglycinamidine synthase II compare
SMc02407 -1.9 -7.2 hypothetical protein compare
SM_b21096 -1.8 -1.2 amino acid transporter ABC transporter ATP-binding protein compare
SMc02724 -1.8 -2.8 hypothetical protein compare
SMc01364 -1.7 -1.1 DNA topoisomerase I compare
SMc00334 -1.7 -1.0 cytidylate kinase compare
SMc02495 -1.7 -1.5 translaldolase compare
SMa1118 -1.7 -1.8 HspC2 heat shock protein compare
SMc03140 -1.7 -4.6 transcriptional regulator compare
SM_b21174 -1.7 -3.8 phosphate uptake ABC transporter permease compare
SMc02307 -1.7 -5.3 histidinol dehydrogenase compare
SMc02778 -1.6 -0.7 hydroxyacid aldolase compare
SMa0753 -1.6 -0.9 hypothetical protein compare
SMc02260 -1.6 -2.4 ABC transporter ATP-binding protein compare
SMc02510 -1.6 -0.9 ferric uptake regulation protein compare
SMc00353 -1.6 -2.1 transmembrane protein compare
SMc01368 -1.6 -4.5 transport transmembrane protein compare
SMc04121 -1.6 -1.8 uracil phosphoribosyltransferase compare
SMc03070 -1.5 -5.4 glucose-6-phosphate 1-dehydrogenase compare
SMc00554 -1.5 -4.4 amidophosphoribosyltransferase compare
SMc00641 -1.5 -4.7 D-3-phosphoglycerate dehydrogenase compare
SMc02868 -1.5 -3.9 multidrug efflux system protein compare
SMc00067 -1.4 -7.9 outer-membranne lipoprotein compare
SMc02114 -1.4 -3.1 hypothetical protein compare
SMc01929 -1.4 -2.2 hypothetical protein compare
SMc00088 -1.4 -1.8 hypothetical protein compare
SMc02753 -1.4 -1.4 PTS system transporter subunit IIA compare
SM_b20259 -1.4 -7.0 dihydrodipicolinate synthase compare
SMc01881 -1.4 -2.4 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
SMc03849 -1.4 -1.3 heme exporter C (cytochrome C-type biogenesis protein) transmembrane compare
SMc01208 -1.4 -2.4 peptidyl-prolyl cis-trans isomerase B protein compare
SMc00296 -1.4 -5.3 POLY3-hydroxybutyrate polymerase compare
SMc01568 -1.4 -1.5 hypothetical protein compare
SMc00640 -1.3 -5.1 phosphoserine aminotransferase compare
SMc03993 -1.3 -3.2 hypothetical protein compare
SM_b20942 -1.3 -2.8 UDP glucose 4-epimerase compare
SMc01438 -1.3 -4.3 protease precursor signal peptide protein compare
SMc02141 -1.3 -1.6 phosphate transporter PhoU compare
SMc01851 -1.3 -5.5 amino acid efflux protein compare
SMc00856 -1.3 -0.9 hypothetical protein compare
SMc02232 -1.3 -2.0 hypothetical protein compare
SMc03028 -1.3 -1.5 flagellar basal body rod protein FlgC compare
SMc03159 -1.3 -1.7 ABC transporter ATP-binding protein compare
SMc04330 -1.3 -1.2 trimethylamine methyltransferase compare
SMc00726 -1.3 -0.7 thiol:disulfide interchange redox-active center transmembrane protein compare
SMc01146 -1.3 -1.5 deoxyribonucleotide triphosphate pyrophosphatase compare
SMc00493 -1.2 -2.9 phosphoribosylformylglycinamidine synthase I compare
SMc02246 -1.2 -0.6 hypothetical protein compare
SMc02362 -1.2 -2.3 cytochrome c-type biogenesis protein CcmE compare
SMa1323 -1.2 -1.9 Transcription regulator compare
SMc01845 -1.2 -1.4 transglycosylase transmembrane protein compare
SMc01595 -1.2 -1.7 sensor histidine kinase transmembrane protein compare
SM_b20724 -1.2 -2.8 hypothetical protein compare
SMc03112 -1.2 -7.9 B12-dependent methionine synthase compare
SMc01187 -1.2 -1.4 rare lipoprotein A compare
SMa0095 -1.2 -2.0 D-aminopeptidase compare
SMc00302 -1.2 -2.0 hypothetical protein compare
SMc02470 -1.2 -1.6 transcriptional regulator compare
SMc02897 -1.2 -2.3 cytochrome C transmembrane protein compare
SMc02484 -1.1 -3.7 amino acid efflux transmembrane protein compare
SM_b20595 -1.1 -3.5 cell division protein FtsK compare
SMc02055 -1.1 -1.1 phytoene synthase compare
SM_b20691 -1.1 -1.4 hypothetical protein compare
SMc03797 -1.1 -4.6 homoserine O-succinyltransferase compare
SM_b20563 -1.1 -2.2 hypothetical protein compare
SMc00976 -1.1 -1.5 enoyl-CoA hydratase compare
SMc04024 -1.1 -3.2 membrane-bound lytic murein transglycosylase compare
SMc00689 -1.1 -3.6 lipoprotein compare
SM_b21026 -1.1 -2.8 exopeptide compare
SMc00492 -1.1 -0.5 hypothetical protein compare
SMc00859 -1.1 -1.2 hypothetical protein compare
SMc02985 -1.0 -5.2 hypothetical protein compare
SMc03774 -1.0 -1.8 hypothetical protein compare
SMa0211 -1.0 -1.0 hypothetical protein compare
SM_b20226 -1.0 -1.5 hypothetical protein compare
SMc02850 -1.0 -2.0 DNA polymerase I compare
SMc02978 -1.0 -4.0 hypothetical protein compare
SMc02856 -1.0 -5.5 penicillin-binding protein compare
SMc02425 -1.0 -3.4 transcriptional regulator compare
SM_b20413 -1.0 -0.7 hypothetical protein compare
SMa0789 -1.0 -2.2 GntR family transcriptional regulator compare
SMa0169 -1.0 -2.0 methyltransferase compare
SMc03935 -1.0 -6.0 hypothetical protein compare
SMc02149 -1.0 -1.6 hypothetical protein compare
SMa0017 -1.0 -2.8 hypothetical protein compare
SMc02867 -1.0 -1.7 multidrug-efflux system transmembrane protein compare
SMc02573 -1.0 -1.5 hypothetical protein compare
SMa0144 -1.0 -0.7 hypothetical protein compare
SMc02287 -1.0 -1.4 DNA-invertase compare
SMc02866 -1.0 -2.5 transcriptional regulator compare
SMc03967 -1.0 -1.2 Holliday junction resolvase compare
SMc02564 -1.0 -1.6 LysM domain/BON superfamily protein compare
SM_b20904 -1.0 -2.1 sugar uptake ABC transporter ATP-binding protein compare
SM_b20387 -0.9 -1.2 transcriptional regulator compare
SMc00467 -0.9 -3.4 hypothetical protein compare
SMc02833 -0.9 -1.0 penicillin-insensitive murein endopeptidase compare
SMc02474 -0.9 -2.0 ABC transporter ATP-binding protein compare
SMa0643 -0.9 -1.0 transposase compare
SMc04348 -0.9 -1.1 transcriptional regulator compare
SMc02373 -0.9 -1.0 hypothetical protein compare
SMc01430 -0.9 -2.2 acetolactate synthase 3 regulatory subunit compare
SM_b20955 -0.9 -1.9 endo-beta-1,3-1,4-glycanase compare
SM_b20143 -0.9 -0.8 oligopeptide ABC transporter permease compare
SMc01472 -0.9 -0.9 50S ribosomal protein L11 methyltransferase compare
SMa2389 -0.9 -1.9 OsmC-like protein compare
SM_b21509 -0.9 -1.4 plasmid stability protein compare
SMc01495 -0.9 -1.9 transcriptional regulator compare
SMc01144 -0.9 -1.6 ribonuclease PH compare
SMc01777 -0.9 -2.4 6,7-dimethyl-8-ribityllumazine synthase compare
SMc00941 -0.9 -1.0 hypothetical protein compare
SMc01916 -0.9 -1.4 signal peptide protein compare
SMc01619 -0.9 -1.3 hypothetical protein compare
SM_b20452 -0.9 -2.3 hypothetical protein compare
SMa1367 -0.9 -1.8 short chain alcohol dehydrogenase-related dehydrogenase compare
SM_b21504 -0.9 -4.4 hypothetical protein compare
SMc01885 -0.9 -2.8 aminopeptidase P protein compare
SMc02861 -0.9 -1.1 phosphate transporter compare
SMc02164 -0.9 -1.2 fructokinase compare
SMc02115 -0.9 -0.9 hypothetical protein compare
SMc03773 -0.9 -2.9 hypothetical protein compare
SMc00019 -0.9 -1.0 hypothetical protein compare
SM_b20400 -0.9 -2.2 hypothetical protein compare
SM_b20803 -0.9 -1.9 3-deoxy-manno-octulosonate cytidylyltransferase compare
SM_b21476 -0.9 -2.0 hypothetical protein compare
SMc02261 -0.8 -1.5 transcriptional regulator compare


Specific Phenotypes

For 3 genes in this experiment

For nitrogen source Gelatin in Sinorhizobium meliloti 1021

For nitrogen source Gelatin across organisms