Experiment set3IT022 for Methanococcus maripaludis S2

Compare to:

H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2

200 most important genes:

  gene name fitness t score description  
MMP_RS06355 -9.1 -3.5 molybdenum cofactor biosynthesis protein MoaE compare
MMP_RS05280 -8.0 -13.4 COG1361 S-layer family protein compare
MMP_RS06120 -7.5 -3.2 UPF0147 family protein compare
MMP_RS07845 -7.1 -3.5 LL-diaminopimelate aminotransferase compare
MMP_RS04710 -6.8 -2.6 hypothetical protein compare
MMP_RS01500 -6.6 -3.3 CBS domain-containing protein compare
MMP_RS06400 -6.6 -2.5 4Fe-4S binding protein compare
MMP_RS06730 -6.5 -2.9 phosphopantothenate/pantothenate synthetase compare
MMP_RS07600 -6.4 -3.6 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS05285 -6.3 -8.9 MMPL family transporter compare
MMP_RS05515 -6.3 -7.6 cyclic pyranopterin monophosphate synthase MoaC compare
MMP_RS04720 -6.3 -4.6 DedA family protein compare
MMP_RS06350 -6.3 -7.8 HesA/MoeB/ThiF family protein compare
MMP_RS03400 -6.2 -3.9 archease compare
MMP_RS08820 -6.2 -8.3 hypothetical protein compare
MMP_RS06900 -6.1 -4.1 coenzyme F420-reducing hydrogenase FrhD protein compare
MMP_RS06285 -6.0 -3.5 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS03025 -6.0 -8.2 molybdenum cofactor guanylyltransferase compare
MMP_RS08460 -6.0 -3.2 proteasome-activating nucleotidase compare
MMP_RS03015 -5.9 -11.3 GTP 3' 8-cyclase MoaA compare
MMP_RS09020 -5.9 -3.1 hypothetical protein compare
MMP_RS02875 -5.8 -10.8 chorismate pyruvate-lyase family protein compare
MMP_RS04500 -5.8 -17.7 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
MMP_RS01175 -5.8 -5.5 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS03315 -5.8 -2.2 ferrous iron transport protein A compare
MMP_RS06895 -5.6 -2.8 selenocysteine-specific translation elongation factor compare
MMP_RS01005 -5.6 -1.7 riboflavin synthase compare
MMP_RS07730 -5.6 -2.7 pyruvate synthase subunit beta compare
MMP_RS01225 -5.5 -7.0 DUF5379 domain-containing protein compare
MMP_RS00300 -5.5 -1.2 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS03700 -5.4 -14.4 sodium:proton antiporter compare
MMP_RS01380 -5.4 -5.6 PHP domain-containing protein compare
MMP_RS08435 -5.4 -3.8 Era-like GTP-binding protein compare
MMP_RS08715 -5.4 -3.2 formylmethanofuran dehydrogenase subunit B compare
MMP_RS00110 -5.4 -4.8 hypothetical protein compare
MMP_RS03600 -5.3 -3.6 triose-phosphate isomerase compare
MMP_RS00305 -5.3 -3.6 phosphoribosyl-ATP diphosphatase compare
MMP_RS08720 -5.3 -2.3 4Fe-4S binding protein compare
MMP_RS02240 -5.3 -4.8 methanogenesis marker 7 protein compare
MMP_RS07755 -5.2 -1.6 DUF555 domain-containing protein compare
MMP_RS08635 -5.2 -2.8 UbiA family prenyltransferase compare
MMP_RS01745 -5.1 -7.7 AMP phosphorylase compare
MMP_RS06670 -5.1 -8.4 glucose-6-phosphate isomerase compare
MMP_RS07750 -5.1 -6.5 DUF357 domain-containing protein compare
MMP_RS08210 -5.1 -3.7 phosphatidylglycerophosphatase A compare
MMP_RS08790 -5.0 -3.6 translation initiation factor IF-2 subunit alpha compare
MMP_RS04775 -5.0 -5.1 adenosylhomocysteinase compare
MMP_RS01830 -5.0 -2.2 tRNA-Val compare
MMP_RS07005 -5.0 -1.1 4Fe-4S binding protein compare
MMP_RS08100 -4.9 -9.1 8-amino-7-oxononanoate synthase compare
MMP_RS00895 -4.9 -6.4 hypothetical protein compare
MMP_RS02195 -4.8 -5.6 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS06630 -4.8 -1.5 UPF0058 family protein compare
MMP_RS02345 -4.8 -5.7 GTP-dependent dephospho-CoA kinase family protein compare
MMP_RS08095 -4.8 -8.0 dethiobiotin synthase compare
MMP_RS00515 -4.8 -1.5 DUF655 domain-containing protein compare
MMP_RS01955 -4.7 -3.7 hypothetical protein compare
MMP_RS01800 -4.7 -7.2 TIGR00303 family protein compare
MMP_RS00325 -4.7 -2.5 RNA-binding protein compare
MMP_RS05250 -4.6 -3.1 NFYB/HAP3 family transcription factor subunit compare
MMP_RS01220 -4.6 -10.2 hypothetical protein compare
MMP_RS05290 -4.6 -9.8 TetR/AcrR family transcriptional regulator compare
MMP_RS01325 -4.6 -3.3 dihydroneopterin aldolase family protein compare
MMP_RS06270 -4.5 -8.4 TIGR00300 family protein compare
MMP_RS07075 -4.5 -5.9 phosphomannomutase/phosphoglucomutase compare
MMP_RS06315 -4.5 -1.4 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMP_RS03435 -4.5 -3.0 ketol-acid reductoisomerase compare
MMP_RS02010 -4.5 -12.2 PHP domain-containing protein compare
MMP_RS08105 -4.5 -8.5 6-carboxyhexanoate--CoA ligase compare
MMP_RS07645 -4.4 -8.0 aldehyde dehydrogenase family protein compare
MMP_RS07195 -4.4 -11.2 M20 family metallo-hydrolase compare
MMP_RS02135 -4.4 -6.1 DUF5612 domain-containing protein compare
MMP_RS07390 -4.4 -4.0 cell division protein FtsZ compare
MMP_RS01700 -4.4 -1.4 dihydroxy-acid dehydratase compare
MMP_RS06295 -4.4 -9.4 methanogenesis marker 14 protein compare
MMP_RS06230 -4.3 -3.8 helix-turn-helix domain-containing protein compare
MMP_RS06370 -4.3 -5.3 biotin synthase BioB compare
MMP_RS01725 -4.3 -6.7 class I SAM-dependent methyltransferase family protein compare
MMP_RS03155 -4.3 -8.7 precorrin-6A reductase compare
MMP_RS00685 -4.3 -6.5 2-phospho-L-lactate guanylyltransferase compare
MMP_RS04685 -4.2 -5.2 DUF126 domain-containing protein compare
MMP_RS01020 -4.2 -1.6 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS01335 -4.1 -3.6 prefoldin subunit beta compare
MMP_RS05640 -4.1 -8.4 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMP_RS08745 -4.1 -8.3 CDP-2 3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMP_RS07635 -4.1 -7.9 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS07545 -4.1 -1.3 HTH domain-containing protein compare
MMP_RS03035 -4.1 -5.3 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS05440 -4.1 -10.3 winged helix-turn-helix transcriptional regulator compare
MMP_RS00040 -4.0 -6.0 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMP_RS04780 -4.0 -4.7 ribonuclease P compare
MMP_RS02280 -4.0 -1.2 DUF211 domain-containing protein compare
MMP_RS02355 -4.0 -4.8 30S ribosomal protein S27ae compare
MMP_RS08440 -4.0 -5.2 cell division protein SepF compare
MMP_RS06020 -4.0 -6.4 archaeoflavoprotein AfpA compare
MMP_RS06475 -4.0 -6.5 FAD-dependent oxidoreductase compare
MMP_RS06885 -3.9 -2.7 50S ribosome-binding GTPase compare
MMP_RS07200 -3.9 -10.7 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS05815 -3.9 -3.3 NOL1/NOP2/sun family putative RNA methylase compare
MMP_RS06340 -3.9 -11.6 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS06925 -3.8 -4.1 ribonuclease VapC4 compare
MMP_RS03640 -3.8 -6.1 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS07605 -3.8 -4.8 diadenylate cyclase compare
MMP_RS06625 -3.8 -3.6 DNA primase compare
MMP_RS05555 -3.7 -2.0 DUF4040 domain-containing protein compare
MMP_RS05930 -3.7 -3.8 3-isopropylmalate dehydratase large subunit compare
MMP_RS00810 -3.6 -12.9 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS05920 -3.6 -1.1 50S ribosomal protein L37e compare
MMP_RS05845 -3.6 -2.9 tRNA-intron lyase compare
MMP_RS00450 -3.5 -3.3 4Fe-4S binding protein compare
MMP_RS02190 -3.5 -5.1 sulfopyruvate decarboxylase subunit alpha compare
MMP_RS05265 -3.5 -3.8 2-isopropylmalate synthase compare
MMP_RS03475 -3.5 -1.1 hypothetical protein compare
MMP_RS01755 -3.5 -2.0 DUF2097 domain-containing protein compare
MMP_RS03445 -3.5 -1.7 methanogenesis marker 17 protein compare
MMP_RS07580 -3.5 -3.2 DUF356 domain-containing protein compare
MMP_RS01900 -3.4 -18.6 hypothetical protein compare
MMP_RS06980 -3.4 -10.1 tRNA 2-thiocytidine biosynthesis TtcA family protein compare
MMP_RS02145 -3.4 -7.2 winged helix-turn-helix transcriptional regulator compare
MMP_RS00750 -3.4 -3.4 fumarate hydratase compare
MMP_RS07735 -3.4 -1.0 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha compare
MMP_RS02900 -3.4 -1.0 imidazoleglycerol-phosphate dehydratase HisB compare
MMP_RS06110 -3.4 -4.5 ATP-dependent protease LonB compare
MMP_RS03960 -3.4 -1.6 hypothetical protein compare
MMP_RS01910 -3.3 -10.5 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
MMP_RS06105 -3.3 -13.8 hydrogenase maturation peptidase HycI compare
MMP_RS08300 -3.3 -2.1 metal-sulfur cluster assembly factor compare
MMP_RS01905 -3.3 -15.8 glycosyltransferase compare
MMP_RS00050 -3.3 -11.8 AarF/UbiB family protein compare
MMP_RS01925 -3.2 -9.6 DUF1616 domain-containing protein compare
MMP_RS05425 -3.2 -6.9 monovalent cation/H+ antiporter complex subunit F compare
MMP_RS07380 -3.2 -3.3 transcription elongation factor Spt5 compare
MMP_RS01610 -3.1 -4.3 hypothetical protein compare
MMP_RS01365 -3.1 -4.3 archaeal proteasome endopeptidase complex subunit alpha compare
MMP_RS01915 -3.1 -13.2 DUF354 domain-containing protein compare
MMP_RS01795 -3.0 -2.3 methanogenesis marker 6 protein compare
MMP_RS03140 -3.0 -16.0 hypothetical protein compare
MMP_RS08650 -3.0 -4.9 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMP_RS04890 -3.0 -1.3 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS03145 -3.0 -11.3 fibrillarin-like rRNA/tRNA 2'-O-methyltransferase compare
MMP_RS02800 -3.0 -6.1 nucleotidyltransferase domain-containing protein compare
MMP_RS06840 -3.0 -1.3 DNA-directed RNA polymerase subunit N compare
MMP_RS01385 -2.9 -1.1 imidazole glycerol phosphate synthase subunit HisH compare
MMP_RS00115 -2.9 -12.7 radical SAM protein compare
MMP_RS06215 -2.9 -3.4 30S ribosomal protein S6e compare
MMP_RS01575 -2.9 -7.8 aldolase compare
MMP_RS00985 -2.9 -7.8 CDC48 family AAA ATPase compare
MMP_RS01920 -2.8 -13.0 glycosyltransferase family 2 protein compare
MMP_RS00320 -2.8 -3.3 class I SAM-dependent methyltransferase compare
MMP_RS05525 -2.8 -9.2 calcium/sodium antiporter compare
MMP_RS00695 -2.7 -1.4 biotin--[acetyl-CoA-carboxylase] ligase compare
MMP_RS02245 -2.7 -5.9 hypothetical protein compare
MMP_RS07630 -2.7 -2.2 ATP-binding cassette domain-containing protein compare
MMP_RS07435 -2.6 -3.1 GMP synthase subunit A compare
MMP_RS06725 -2.6 -13.2 hypothetical protein compare
MMP_RS03580 -2.6 -4.2 signal recognition particle-docking protein FtsY compare
MMP_RS04605 -2.6 -4.7 cobalt ECF transporter T component CbiQ compare
MMP_RS06940 -2.6 -3.4 polyprenyl diphosphate synthase compare
MMP_RS04850 -2.6 -19.2 UPF0254 family protein compare
MMP_RS03095 -2.5 -9.1 diphthine synthase compare
MMP_RS07695 -2.5 -7.9 DUF3236 domain-containing protein compare
MMP_RS00720 -2.5 -10.1 metal-dependent hydrolase compare
MMP_RS01970 -2.5 -9.9 TIGR04279 domain-containing protein compare
MMP_RS01895 -2.5 -11.1 flippase compare
MMP_RS02290 -2.5 -11.1 MBL fold metallo-hydrolase compare
MMP_RS00315 -2.5 -10.8 Nif3-like dinuclear metal center hexameric protein compare
MMP_RS06310 -2.4 -4.0 NAD(P)/FAD-dependent oxidoreductase compare
MMP_RS04900 -2.4 -18.9 hypothetical protein compare
MMP_RS03270 -2.4 -11.7 ADP-ribosylglycohydrolase family protein compare
MMP_RS00520 -2.4 -2.7 RNA polymerase Rpb4 family protein compare
MMP_RS05345 -2.4 -8.7 hypothetical protein compare
MMP_RS06175 -2.4 -8.7 winged helix-turn-helix transcriptional regulator compare
MMP_RS05925 -2.3 -4.2 small nuclear ribonucleoprotein compare
MMP_RS00725 -2.3 -9.9 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMP_RS02235 -2.3 -11.4 CBS domain-containing protein compare
MMP_RS07420 -2.3 -3.6 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS06395 -2.3 -5.5 ThiF family adenylyltransferase compare
MMP_RS04615 -2.2 -3.2 PDGLE domain-containing protein compare
MMP_RS03110 -2.2 -7.0 glycosyltransferase family 2 protein compare
MMP_RS05500 -2.2 -8.7 2-isopropylmalate synthase compare
MMP_RS01415 -2.2 -5.2 DUF2067 domain-containing protein compare
MMP_RS07355 -2.2 -1.3 transcription factor S compare
MMP_RS07425 -2.1 -6.1 GTP-binding protein compare
MMP_RS06865 -2.1 -2.2 HypC/HybG/HupF family hydrogenase formation chaperone compare
MMP_RS07525 -2.1 -9.7 4Fe-4S binding protein compare
MMP_RS07350 -2.1 -1.6 preprotein translocase subunit Sec61beta compare
MMP_RS08330 -2.1 -4.0 NADH-quinone oxidoreductase subunit H compare
MMP_RS07555 -2.1 -1.0 monovalent cation/H+ antiporter subunit E compare
MMP_RS04870 -2.1 -4.5 TIGR02253 family HAD-type hydrolase compare
MMP_RS01265 -2.1 -2.3 hypothetical protein compare
MMP_RS01885 -2.1 -7.3 Gfo/Idh/MocA family oxidoreductase compare
MMP_RS08445 -2.1 -5.4 DUF2099 family protein compare
MMP_RS08785 -2.1 -1.8 RNA-protein complex protein Nop10 compare
MMP_RS00900 -2.1 -3.5 50S ribosomal protein L39e compare
MMP_RS00735 -2.0 -4.3 5 10-methenyltetrahydromethanopterin hydrogenase compare
MMP_RS07090 -2.0 -9.6 tRNA (adenine-N1)-methyltransferase compare
MMP_RS05445 -2.0 -8.1 CoB--CoM heterodisulfide reductase subunit B compare
MMP_RS05875 -2.0 -7.1 hydroxyethylthiazole kinase compare
MMP_RS00130 -2.0 -1.7 nickel-responsive transcriptional regulator NikR compare
MMP_RS01975 -2.0 -13.1 hypothetical protein compare


Specific Phenotypes

For 3 genes in this experiment