Experiment set3IT020 for Herbaspirillum seropedicae SmR1
D-Glucose carbon source
Group: carbon sourceMedia: NFbHP_noCarbon + D-Glucose (5 g/L), pH=6.5
Culturing: HerbieS_ML4, flask, Aerobic, at 30 (C), shaken=120 rpm
Growth: about 5.9 generations
By: Thalita Tuleski on 19-May-16
Specific Phenotypes
For 1 genes in this experiment
For carbon source D-Glucose in Herbaspirillum seropedicae SmR1
For carbon source D-Glucose across organisms
SEED Subsystems
| Subsystem | #Specific |
|---|---|
| Gentisare degradation | 1 |
| Salicylate and gentisate catabolism | 1 |
Metabolic Maps
Color code by fitness: see overview map or list of maps.
MetaCyc Pathways
Pathways that contain genes with specific phenotypes:
| Pathway | #Steps | #Present | #Specific |
|---|---|---|---|
| D-xylose degradation V | 5 | 4 | 1 |
| D-xylose degradation III | 5 | 3 | 1 |
| D-arabinose degradation III | 6 | 4 | 1 |
| superpathway of pentose and pentitol degradation | 42 | 19 | 1 |