Experiment set3IT019 for Pseudomonas syringae pv. syringae B728a

Compare to:

KB with Mitomycin C 0.625 ug/ml

200 most detrimental genes:

  gene name fitness t score description  
Psyr_3003 +7.1 10.7 [Acyl-carrier protein] phosphodiesterase conserved
Psyr_3906 +6.0 2.6 regulatory protein, DeoR compare
Psyr_1304 +6.0 2.2 CheW-like protein compare
Psyr_3324 +4.9 8.9 transcriptional regulator, TetR family compare
Psyr_2774 +4.7 4.0 Bacteriophage lambda tail assembly I compare
Psyr_2930 +4.6 2.0 Glyoxalase/bleomycin resistance protein/dioxygenase compare
Psyr_2540 +4.5 1.9 Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal compare
Psyr_4006 +4.4 11.3 transcriptional regulator, TetR family compare
Psyr_2312 +4.4 1.0 Protein of unknown function DUF24 compare
Psyr_2117 +4.4 2.1 conserved hypothetical protein compare
Psyr_2806 +4.0 6.3 Bacteriophage Lambda NinG compare
Psyr_2778 +3.9 3.7 Phage minor tail protein L compare
Psyr_2783 +3.8 7.3 conserved hypothetical protein conserved
Psyr_2765 +3.8 5.7 conserved domain protein compare
Psyr_2781 +3.7 9.7 hypothetical protein compare
Psyr_4418 +3.6 2.7 Precorrin-6Y C5,15-methyltransferase (decarboxylating) compare
Psyr_2788 +3.6 4.1 hypothetical protein compare
Psyr_3521 +3.6 3.6 transcriptional regulator, LysR family compare
Psyr_2813 +3.6 8.4 conserved hypothetical protein conserved
Psyr_3425 +3.5 3.2 Cyclic nucleotide-binding:Bacterial regulatory protein, Crp compare
Psyr_1946 +3.5 1.5 diaminobutyrate aminotransferase apoenzyme compare
Psyr_2785 +3.5 7.2 conserved hypothetical protein conserved
Psyr_2805 +3.4 11.9 hypothetical protein conserved
Psyr_2827 +3.4 5.8 phage-related protein compare
Psyr_3791 +3.4 4.3 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal compare
Psyr_2799 +3.3 6.9 hypothetical protein conserved
Psyr_4151 +3.3 2.3 Phosphocarrier HPr protein compare
Psyr_2760 +3.3 8.2 hypothetical protein conserved
Psyr_2764 +3.3 9.8 conserved hypothetical protein conserved
Psyr_2151 +3.2 1.0 monosaccharide ABC transporter substrate-binding protein, CUT2 family compare
Psyr_2773 +3.2 7.8 hypothetical protein conserved
Psyr_2733 +3.2 1.8 Short-chain dehydrogenase/reductase SDR compare
Psyr_2761 +3.2 11.7 DNA-directed DNA polymerase conserved
Psyr_2815 +3.2 12.3 conserved hypothetical protein conserved
Psyr_2822 +3.2 4.9 hypothetical protein compare
Psyr_3055 +3.1 1.3 Aminoglycoside phosphotransferase compare
Psyr_2789 +3.1 6.4 conserved hypothetical protein conserved
Psyr_0531 +3.1 4.8 LmbE-like protein compare
Psyr_0726 +3.1 6.5 ribosomal large subunit pseudouridine synthase D conserved
Psyr_2782 +3.1 7.0 hypothetical protein conserved
Psyr_2762 +3.0 9.5 Peptidase S24, S26A and S26B conserved
Psyr_2776 +3.0 8.3 hypothetical protein conserved
Psyr_2830 +3.0 2.7 conserved hypothetical protein compare
Psyr_2829 +3.0 3.6 conserved hypothetical protein compare
Psyr_1419 +3.0 3.4 preQ(0) biosynthesis protein QueC compare
Psyr_2775 +3.0 10.7 hypothetical protein conserved
Psyr_2243 +2.9 3.5 Endoribonuclease L-PSP compare
Psyr_2134 +2.9 2.4 protein of unknown function DUF903 compare
Psyr_4842 +2.9 9.8 Phosphoenolpyruvate-protein phosphotransferase compare
Psyr_2790 +2.9 4.8 conserved hypothetical protein compare
Psyr_0915 +2.8 8.8 NAD-dependent epimerase/dehydratase compare
Psyr_2828 +2.8 8.6 C-5 cytosine-specific DNA methylase conserved
Psyr_2073 +2.8 3.3 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase compare
Psyr_3289 +2.8 3.4 3-ketoacyl-CoA thiolase compare
Psyr_4404 +2.7 2.3 tRNA-U20-dihydrouridine synthase compare
Psyr_2777 +2.7 6.1 NLP/P60 conserved
Psyr_2763 +2.7 6.5 Protein of unknown function DUF159 conserved
Psyr_1875 +2.7 1.5 Enoyl-CoA hydratase/isomerase compare
Psyr_1193 +2.7 1.7 type III helper protein HrpZ1 compare
Psyr_2780 +2.7 13.5 Phage tail tape measure protein lambda conserved
Psyr_2817 +2.7 7.0 hypothetical protein conserved
Psyr_2835 +2.7 6.7 hypothetical protein conserved
Psyr_2471 +2.6 2.1 hydroxymethylglutaryl-CoA lyase compare
Psyr_1941 +2.6 2.2 ATP-binding region, ATPase-like:Histidine kinase compare
Psyr_2497 +2.6 3.1 lipoprotein, putative compare
Psyr_2816 +2.6 6.5 hypothetical protein conserved
Psyr_2793 +2.6 10.2 hypothetical protein conserved
Psyr_2767 +2.6 2.7 Glycoside hydrolase, family 19 compare
Psyr_0914 +2.6 9.5 Glycosyl transferase, group 1 compare
Psyr_2801 +2.5 6.6 hypothetical protein conserved
Psyr_2792 +2.5 6.1 Phage putative head morphogenesis protein, SPP1 gp7 conserved
Psyr_0436 +2.5 2.1 Phosphopantetheine-binding protein compare
Psyr_4582 +2.5 1.2 hypothetical protein compare
Psyr_2719 +2.5 2.8 transcriptional regulator, TetR family compare
Psyr_1250 +2.5 2.0 conserved hypothetical protein compare
Psyr_5067 +2.4 5.2 conserved hypothetical protein compare
Psyr_2796 +2.4 4.5 conserved hypothetical protein compare
Psyr_2772 +2.4 14.7 Fibronectin, type III conserved
Psyr_2771 +2.4 8.2 conserved domain protein conserved
Psyr_3841 +2.4 2.1 conserved hypothetical protein compare
Psyr_2481 +2.4 2.7 thiol peroxidase (atypical 2-Cys peroxiredoxin) compare
Psyr_3674 +2.3 1.8 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase compare
Psyr_2821 +2.3 6.5 conserved hypothetical protein conserved
Psyr_2794 +2.3 7.6 Protein of unknown function DUF264 conserved
Psyr_3672 +2.3 2.1 cobalamin-5'-phosphate synthase compare
Psyr_4838 +2.3 2.6 transcriptional regulator, MerR family compare
Psyr_3684 +2.3 1.2 NLP/P60 compare
Psyr_2795 +2.3 6.1 conserved hypothetical protein compare
Psyr_2808 +2.3 1.7 hypothetical protein compare
Psyr_2825 +2.2 8.3 DNA methylase N-4/N-6 conserved
Psyr_2834 +2.2 6.7 hypothetical protein conserved
Psyr_2840 +2.2 3.7 hypothetical protein compare
Psyr_2401 +2.2 3.2 extracellular solute-binding protein, family 1 compare
Psyr_2867 +2.2 2.3 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal compare
Psyr_2820 +2.2 2.7 RecT protein compare
Psyr_2337 +2.2 2.1 conserved hypothetical protein compare
Psyr_2787 +2.2 3.6 hypothetical protein compare
Psyr_2836 +2.2 3.8 hypothetical protein compare
Psyr_4355 +2.2 3.0 hypothetical protein compare
Psyr_2784 +2.2 7.1 phage-related conserved hypothetical protein conserved
Psyr_3432 +2.2 1.9 MotA/TolQ/ExbB proton channel compare
Psyr_1528 +2.1 1.1 Arc-like DNA binding protein compare
Psyr_2770 +2.1 5.5 tail fiber domain protein conserved
Psyr_3867 +2.1 1.3 hypothetical protein compare
Psyr_2826 +2.1 4.9 hypothetical protein compare
Psyr_3677 +2.1 2.4 Aminotransferase, class I and II compare
Psyr_2798 +2.1 5.6 hypothetical protein conserved
Psyr_1487 +2.1 1.5 conserved hypothetical protein compare
Psyr_0674 +2.0 1.7 Protein of unknown function UPF0029 compare
Psyr_0532 +2.0 5.0 conserved hypothetical protein compare
Psyr_2844 +2.0 3.8 hypothetical protein compare
Psyr_1431 +2.0 4.2 hypothetical protein compare
Psyr_2786 +2.0 3.1 phage-related conserved hypothetical protein compare
Psyr_2791 +2.0 4.1 hypothetical protein compare
Psyr_2752 +2.0 1.7 conserved hypothetical protein compare
Psyr_2843 +1.9 5.0 C-5 cytosine-specific DNA methylase conserved
Psyr_0037 +1.9 2.1 Protein of unknown function DUF1458 compare
Psyr_2818 +1.9 4.0 hypothetical protein compare
Psyr_1222 +1.9 1.2 CDS compare
Psyr_2128 +1.9 1.9 Protein of unknown function DUF6 compare
Psyr_2804 +1.9 2.3 hypothetical protein compare
Psyr_2679 +1.9 2.9 Binding-protein-dependent transport systems inner membrane component compare
Psyr_2907 +1.9 2.7 PpiC-type peptidyl-prolyl cis-trans isomerase compare
Psyr_3848 +1.8 3.3 L-valine ABC transporter ATP-binding protein / L-isoleucine ABC transporter ATP-binding protein / L-leucine ABC transporter ATP-binding protein compare
Psyr_2330 +1.8 2.4 FAD dependent oxidoreductase compare
Psyr_1968 +1.8 2.0 RND efflux system, outer membrane lipoprotein, NodT compare
Psyr_3007 +1.8 1.0 Protein of unknown function DUF1294 compare
Psyr_2833 +1.8 2.0 CDS compare
Psyr_1678 +1.8 1.2 Hypothetical protein compare
Psyr_2797 +1.8 2.9 hypothetical protein compare
Psyr_3143 +1.8 2.2 general secretion pathway protein M, putative compare
Psyr_4813 +1.8 2.0 Short-chain dehydrogenase/reductase SDR compare
Psyr_0278 +1.7 5.1 ABC-3 compare
Psyr_0826 +1.7 6.6 glucose-6-phosphate isomerase compare
Psyr_1162 +1.7 2.2 conserved hypothetical protein compare
Psyr_3702 +1.7 1.1 Arsenate reductase compare
Psyr_2350 +1.7 1.6 Protein of unknown function UPF0025 compare
Psyr_1127 +1.7 2.1 Heavy metal response regulator compare
Psyr_2213 +1.7 1.9 transcriptional regulator, AraC family compare
Psyr_1616 +1.7 1.3 Rieske [2Fe-2S] region compare
Psyr_2741 +1.7 2.8 Beta-lactamase compare
Psyr_0966 +1.7 4.4 Conserved hypothetical protein YfcH compare
Psyr_2244 +1.7 1.0 DNA topoisomerase III compare
Psyr_4605 +1.7 3.4 transcriptional regulator PrtN, putative compare
Psyr_3782 +1.7 2.6 CsbD-like protein compare
Psyr_0502 +1.7 5.2 potassium/proton antiporter, CPA1 family compare
Psyr_3770 +1.7 4.8 Propeptide, PepSY amd peptidase M4 compare
Psyr_3346 +1.7 2.9 conserved hypothetical protein compare
Psyr_2406 +1.6 2.0 Flavin reductase-like protein compare
Psyr_RNA61 +1.6 1.7 tRNA-Gly compare
Psyr_3692 +1.6 1.3 conserved hypothetical protein compare
Psyr_4285 +1.6 1.7 Ferredoxin:[2Fe-2S]-binding protein compare
Psyr_2779 +1.6 2.4 Phage minor tail compare
Psyr_3480 +1.6 1.9 Flagellar basal-body rod protein FlgC compare
Psyr_2259 +1.6 1.3 Beta-lactamase-like protein compare
Psyr_3305 +1.6 2.3 Glycosyl transferase, group 1 compare
Psyr_2449 +1.6 1.9 Response regulator receiver compare
Psyr_2057 +1.6 2.0 acyl-CoA thioesterase II, putative compare
Psyr_0320 +1.6 4.3 Protein of unknown function UPF0149 compare
Psyr_4593 +1.6 2.5 sigma factor domain protein compare
Psyr_2396 +1.6 1.3 Tartrate dehydrogenase compare
Psyr_2952 +1.6 4.1 NADP oxidoreductase, coenzyme F420-dependent compare
Psyr_1638 +1.6 2.6 RNAse E compare
Psyr_2706 +1.6 3.5 gamma-glutamyl-gamma-aminobutyrate hydrolase compare
Psyr_2841 +1.6 4.0 hypothetical protein compare
Psyr_3255 +1.6 1.4 multisubunit potassium/proton antiporter, PhaE subunit compare
Psyr_3111 +1.5 2.0 transcriptional regulator, LysR family compare
Psyr_1317 +1.5 1.5 conserved hypothetical protein compare
Psyr_3198 +1.5 1.9 NADH dehydrogenase subunit B compare
Psyr_1816 +1.5 3.0 transcriptional regulator, GntR family compare
Psyr_1615 +1.5 1.7 Patatin compare
Psyr_2155 +1.5 1.8 Carbohydrate kinase, PfkB compare
Psyr_4350 +1.5 2.2 Protein of unknown function DUF218 compare
Psyr_0534 +1.5 8.2 membrane protein, putative compare
Psyr_3473 +1.5 1.0 Flagellar P-ring protein compare
Psyr_2324 +1.5 3.3 conserved hypothetical protein compare
Psyr_0441 +1.5 1.0 conserved hypothetical protein compare
Psyr_3299 +1.5 2.0 two component transcriptional regulator, LuxR family compare
Psyr_1992 +1.5 0.9 Zinc-containing alcohol dehydrogenase superfamily compare
Psyr_2894 +1.5 1.1 conserved hypothetical protein compare
Psyr_4895 +1.5 2.4 conserved hypothetical protein compare
Psyr_0498 +1.4 1.8 Protein of unknown function DUF1445 compare
Psyr_1844 +1.4 1.6 conserved hypothetical protein compare
Psyr_1987 +1.4 1.0 2-keto-3-deoxygalactonate kinase compare
Psyr_2960 +1.4 2.4 Binding-protein-dependent transport systems inner membrane component compare
Psyr_3373 +1.4 1.6 conserved hypothetical protein compare
Psyr_0936 +1.4 5.6 Glycosyl transferase, group 1 compare
Psyr_3596 +1.4 1.7 Selenoprotein W-related protein compare
Psyr_3288 +1.4 1.7 conserved hypothetical protein compare
Psyr_4125 +1.4 1.6 Protein of unknown function DUF1043 compare
Psyr_4601 +1.4 1.2 hypothetical protein compare
Psyr_3023 +1.4 1.9 conserved hypothetical protein compare
Psyr_1783 +1.3 1.4 CDS compare
Psyr_3053 +1.3 2.2 conserved hypothetical protein compare
Psyr_2879 +1.3 0.9 VirK compare
Psyr_3790 +1.3 2.2 conserved hypothetical protein compare
Psyr_2802 +1.3 2.4 lipoprotein, putative compare
Psyr_4062 +1.3 2.8 Pyridoxamine 5'-phosphate oxidase-related protein compare
Psyr_0243 +1.3 4.1 cyclic nucleotide-binding protein compare
Psyr_2846 +1.3 5.3 Phage integrase:Phage integrase, N-terminal SAM-like protein conserved


Specific Phenotypes

For 55 genes in this experiment

For stress Mitomycin C in Pseudomonas syringae pv. syringae B728a

For stress Mitomycin C across organisms