Experiment set3IT019 for Sinorhizobium meliloti 1021

Compare to:

Gly-DL-Asp nitrogen source

200 most important genes:

  gene name fitness t score description  
SMc00235 -7.8 -5.4 anthranilate phosphoribosyltransferase compare
SMc00495 -7.8 -4.0 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
SMc00918 -7.5 -5.2 ATP phosphoribosyltransferase regulatory subunit compare
SMc00917 -7.5 -4.8 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
SMc01843 -7.1 -10.9 5,10-methylenetetrahydrofolate reductase compare
SMc00236 -6.9 -5.1 Indole-3-glycerol phosphate synthase compare
SMc02767 -6.8 -10.4 N-(5'-phosphoribosyl)anthranilate isomerase compare
SMc02717 -6.7 -12.8 2-isopropylmalate synthase compare
SMc02725 -6.5 -12.5 anthranilate synthase compare
SMc02899 -6.5 -13.2 prephenate dehydratase compare
SMc03797 -6.4 -11.6 homoserine O-succinyltransferase compare
SMc01361 -6.3 -4.4 dihydroorotase compare
SMc02766 -6.3 -18.6 tryptophan synthase subunit beta compare
SMc02217 -6.2 -4.3 O-succinylhomoserine sulfhydrylase compare
SMc02572 -6.2 -4.4 imidazole glycerol phosphate synthase subunit HisH compare
SMc00494 -6.2 -1.7 phosphoribosylformylglycinamidine synthase subunit PurS compare
SMa1635 -6.1 -1.7 hypothetical protein compare
SMc01431 -6.0 -13.9 acetolactate synthase 3 catalytic subunit compare
SM_b21174 -5.9 -5.9 phosphate uptake ABC transporter permease compare
SMc03229 -5.9 -2.7 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
SM_b21175 -5.8 -4.4 phosphate uptake ABC transporter permease compare
SMc00554 -5.8 -6.9 amidophosphoribosyltransferase compare
SMc03823 -5.6 -12.3 isopropylmalate isomerase large subunit compare
SMc04405 -5.5 -10.7 3-isopropylmalate dehydrogenase compare
SMc03112 -5.5 -18.7 B12-dependent methionine synthase compare
SMc02165 -5.5 -9.1 orotate phosphoribosyltransferase compare
SMc04002 -5.4 -4.5 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
SMc00488 -5.3 -15.6 phosphoribosylformylglycinamidine synthase II compare
SMc00412 -5.3 -6.9 orotidine 5'-phosphate decarboxylase compare
SMc01801 -5.3 -3.0 N-acetylglutamylphosphate reductase (EC 1.2.1.38) (from data) compare
SMc00711 -5.3 -4.6 cyclohexadienyl dehydrogenase compare
SMc02707 -5.3 -4.2 hypothetical protein compare
SMc02765 -5.3 -13.0 tryptophan synthase subunit alpha compare
SMc02245 -5.2 -7.7 dihydroorotate dehydrogenase 2 compare
SMc00614 -5.2 -6.8 phosphoribosylglycinamide formyltransferase compare
SMc01004 -5.1 -11.4 phosphoribosyl-AMP cyclohydrolase compare
SMc00993 -5.1 -10.6 phosphoribosylamine--glycine ligase compare
SMc03826 -5.0 -4.4 argininosuccinate synthase compare
SMc02569 -4.9 -4.1 imidazole glycerol phosphate synthase subunit HisF compare
SMc03763 -4.9 -3.4 cytosine-specific methyltransferase compare
SMc04045 -4.9 -9.8 dihydroxy-acid dehydratase compare
SMc01726 -4.8 -6.9 acetylglutamate kinase compare
SMc02138 -4.8 -11.1 acetylornithine transaminase compare
SMc03070 -4.7 -8.9 glucose-6-phosphate 1-dehydrogenase compare
SMc02166 -4.7 -11.9 dihydroorotase compare
SMc02755 -4.7 -8.4 S-adenosyl-L-homocysteine hydrolase compare
SMc04088 -4.6 -8.8 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
SMc03978 -4.6 -3.2 transketolase compare
SMc02048 -4.6 -4.5 glycine cleavage system protein H compare
SMc01881 -4.5 -4.2 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
SMc00726 -4.5 -1.2 thiol:disulfide interchange redox-active center transmembrane protein compare
SMc01569 -4.5 -1.7 carbamoyl phosphate synthase small subunit compare
SMc00293 -4.4 -8.4 homoserine dehydrogenase compare
SMc02570 -4.4 -6.8 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
SMc03777 -4.4 -8.7 gamma-glutamyl phosphate reductase compare
SMc02307 -4.4 -9.7 histidinol dehydrogenase compare
SMc01880 -4.2 -2.9 pantoate--beta-alanine ligase compare
SMc04001 -4.2 -1.1 phosphoribosylaminoimidazole carboxylase catalytic subunit protein compare
SMc02047 -4.1 -5.5 glycine cleavage system aminomethyltransferase T compare
SMc01215 -4.1 -2.8 carbamoyl phosphate synthase large subunit compare
SMc02049 -4.1 -19.3 glycine dehydrogenase compare
SMc04346 -4.0 -5.4 ketol-acid reductoisomerase compare
SMc00615 -3.9 -5.1 phosphoribosylaminoimidazole synthetase compare
SMc00131 -3.9 -12.9 transcriptional regulator compare
SMc00493 -3.8 -4.8 phosphoribosylformylglycinamidine synthase I compare
SMc03795 -3.8 -1.5 isopropylmalate isomerase small subunit compare
SMc01360 -3.8 -3.7 aspartate carbamoyltransferase catalytic subunit compare
SMc04026 -3.8 -9.5 glutamate synthase compare
SMc00302 -3.8 -3.2 hypothetical protein compare
SMc03776 -3.5 -3.1 gamma-glutamyl kinase compare
SMc00450 -3.5 -2.1 protoheme IX farnesyltransferase compare
SMc02574 -3.5 -3.6 imidazoleglycerol-phosphate dehydratase compare
SM_b21176 -3.5 -4.7 phosphate uptake ABC transporter substrate-binding protein precursor compare
SMc03068 -3.5 -10.1 phosphogluconate dehydratase compare
SMc00017 -3.5 -1.3 homoserine kinase compare
SMc00294 -3.4 -10.0 aminotransferase compare
SMc02510 -3.3 -1.3 ferric uptake regulation protein compare
SMc00963 -3.3 -5.2 hypothetical protein compare
SMc02137 -3.2 -2.4 ornithine carbamoyltransferase compare
SM_b20904 -3.2 -4.4 sugar uptake ABC transporter ATP-binding protein compare
SM_b21177 -3.0 -7.9 phosphate uptake ABC transporter ATP-binding protein compare
SMc02055 -3.0 -2.4 phytoene synthase compare
SMc02425 -2.8 -3.4 transcriptional regulator compare
SMc02058 -2.8 -2.8 YAJC protein compare
SMc00788 -2.8 -4.1 peptide ABC transporter permease compare
SMc03924 -2.8 -9.3 glycogen synthase compare
SMc04296 -2.6 -1.4 cell division protein FtsZ compare
SMc04028 -2.6 -14.6 glutamate synthase compare
SMc00790 -2.5 -10.6 peptide ABC transporter ATP-binding protein compare
SM_b20903 -2.5 -7.8 sugar uptake ABC transporter permease compare
SMc02246 -2.4 -0.9 hypothetical protein compare
SMc03100 -2.4 -1.3 hypothetical protein compare
SMc03967 -2.4 -2.0 Holliday junction resolvase compare
SMc01124 -2.3 -6.7 PII uridylyl-transferase compare
SMc00786 -2.3 -10.4 periplasmic dipeptide-binding protein conserved
SM_b20307 -2.3 -1.2 dihydroxyacetone kinase compare
SMc00789 -2.2 -4.9 peptide ABC transporter ATP-binding protein compare
SM_b20902 -2.2 -8.5 sugar uptake ABC transporter substrate-binding protein precursor compare
SMc02640 -2.2 -5.3 UDP-glucuronic acid epimerase compare
SMc01578 -2.2 -8.9 aspartate aminotransferase compare
SMc02833 -2.2 -2.2 penicillin-insensitive murein endopeptidase compare
SMc02124 -2.1 -9.2 nitrite reductase compare
SMc02835 -2.1 -6.5 glucokinase compare
SMc01147 -2.0 -4.0 coproporphyrinogen III oxidase compare
SMc01430 -2.0 -6.0 acetolactate synthase 3 regulatory subunit compare
SMc00815 -2.0 -1.6 inosine 5'-monophosphate dehydrogenase compare
SMa2289 -2.0 -1.3 hypothetical protein compare
SMc02724 -1.9 -3.5 hypothetical protein compare
SMc01206 -1.9 -1.6 queuine tRNA-ribosyltransferase compare
SMa0093 -1.8 -2.4 Branched-chain amino acid aminotransferase compare
SMc00091 -1.8 -9.4 sulfate adenylyltransferase compare
SMc00982 -1.8 -5.6 dioxygenase compare
SMc01207 -1.8 -1.8 S-adenosylmethionine--tRNA ribosyltransferase-isomerase compare
SMc00787 -1.8 -3.6 peptide ABC transporter permease compare
SM_b20948 -1.8 -1.7 glucosyltransferase compare
SMc01053 -1.8 -4.3 siroheme synthase compare
SMc00092 -1.8 -7.8 phosphoadenosine phosphosulfate reductase compare
SMc01850 -1.8 -2.6 hypothetical protein compare
SMc02812 -1.7 -3.3 hypothetical protein compare
SM_b21132 -1.7 -2.3 sulfate ABC transporter permease compare
SMa2253 -1.7 -1.4 hypothetical protein compare
SMc01842 -1.7 -1.6 methyltransferase transcription regulator protein compare
SMc02123 -1.7 -3.2 required for sulfate utilization, putative electron transport protein for sulfite reductase (from data) compare
SMc01187 -1.7 -1.6 rare lipoprotein A compare
SMc03069 -1.7 -2.6 6-phosphogluconolactonase compare
SMc02983 -1.7 -5.4 ornithine, DAP, or arginine decarboxylase compare
SMc00876 -1.6 -5.2 ATP-binding MRP protein compare
SMc01440 -1.6 -3.2 hydrolase serine protease transmembrane protein compare
SMc03850 -1.6 -1.6 heme exporter D (cytochrome C-type biogenesis protein) transmembrane compare
SMa5011 -1.6 -2.2 oxidoreductase compare
SMc02115 -1.6 -1.3 hypothetical protein compare
SMa0789 -1.6 -2.8 GntR family transcriptional regulator compare
SMc02232 -1.6 -3.8 hypothetical protein compare
SMc00987 -1.5 -1.9 hypothetical protein compare
SMc02858 -1.5 -1.0 chaperone protein DnaJ compare
SMc00090 -1.5 -5.3 sulfate adenylyltransferase compare
SMc04005 -1.5 -3.7 pyruvate kinase compare
SMc03242 -1.4 -2.6 GTP-binding protein compare
SMa1323 -1.4 -1.6 Transcription regulator compare
SMc02909 -1.4 -1.0 transglycosylase transmembrane protein compare
SMc01723 -1.4 -1.9 hypothetical protein compare
SMc02906 -1.4 -0.9 hypothetical protein compare
SMc01028 -1.4 -7.7 phosphopyruvate hydratase compare
SMc02140 -1.4 -2.1 phosphate regulon transcriptional regulatory protein compare
SMc00353 -1.4 -1.6 transmembrane protein compare
SM_b21111 -1.4 -2.6 oxidoreductase, RED superfamily protein compare
SMc03979 -1.4 -1.1 glyceraldehyde-3-phosphate dehydrogenase compare
SM_b20690 -1.4 -1.7 hypothetical protein compare
SMc04462 -1.3 -3.1 glycerate dehydrogenase compare
SMc02861 -1.3 -1.7 phosphate transporter compare
SMc00241 -1.3 -2.5 transcriptional regulator compare
SMc00914 -1.3 -2.9 oxidoreductase compare
SMc00580 -1.3 -2.8 4-hydroxythreonine-4-phosphate dehydrogenase compare
SMc00013 -1.3 -1.9 cytochrome C oxidase subunit III transmembrane protein compare
SMc02229 -1.3 -6.8 acyl-CoA dehydrogenase compare
SMc02521 -1.3 -3.0 glycerol-3-phosphate regulon repressor transcription regulator protein compare
SM_b20105 -1.3 -1.0 transcriptional regulator compare
SMc00619 -1.3 -1.8 hypothetical protein compare
SMc02102 -1.3 -3.3 hypothetical protein compare
SMc03878 -1.2 -2.2 acetoacetyl-CoA reductase compare
SMc03839 -1.2 -1.4 hypothetical protein compare
SMc00941 -1.2 -1.3 hypothetical protein compare
SMc01054 -1.2 -1.9 required for sulfate utilization, putative electron source for sulfite reductase CysI (from data) compare
SM_b21096 -1.2 -0.9 amino acid transporter ABC transporter ATP-binding protein compare
SMc02373 -1.2 -1.3 hypothetical protein compare
SM_b20293 -1.2 -0.6 hypothetical protein compare
SMc02850 -1.2 -2.1 DNA polymerase I compare
SMc01026 -1.2 -2.4 hypothetical protein compare
SMc01007 -1.2 -1.4 hypothetical protein compare
SMc01441 -1.2 -3.1 membrane bound protease compare
SMc02142 -1.2 -4.3 phosphate transporter ATP-binding protein compare
SMc00821 -1.2 -1.4 hypothetical protein compare
SMc00944 -1.2 -2.7 hypothetical protein compare
SMc00981 -1.2 -4.3 ferredoxin protein compare
SMc01651 -1.2 -1.8 transcriptional regulator compare
SMc00191 -1.2 -1.3 hypothetical protein compare
SMc01097 -1.2 -2.3 hypothetical protein compare
SMa0112 -1.1 -2.2 hypothetical protein compare
SMa0126 -1.1 -1.3 CspA8 Cold shock family protein compare
SMc04000 -1.1 -0.9 hypothetical protein compare
SMc00565 -1.1 -1.2 50S ribosomal protein L9 compare
SMc00976 -1.1 -1.7 enoyl-CoA hydratase compare
SMc00334 -1.1 -1.6 cytidylate kinase compare
SMa0886 -1.1 -1.0 hypothetical protein compare
SM_b20711 -1.1 -1.8 hypothetical protein compare
SMa1118 -1.1 -1.4 HspC2 heat shock protein compare
SMc03153 -1.1 -2.2 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase compare
SMc01043 -1.1 -4.0 nitrogen assimilation regulatory protein compare
SMc04453 -1.1 -0.8 hypothetical protein compare
SM_b21667 -1.1 -2.0 hypothetical protein compare
SMc02141 -1.1 -3.2 phosphate transporter PhoU compare
SMc04348 -1.1 -0.9 transcriptional regulator compare
SMc02046 -1.1 -1.4 hypothetical protein compare
SMc02897 -1.1 -2.1 cytochrome C transmembrane protein compare
SMc02868 -1.0 -3.9 multidrug efflux system protein compare
SMa1779 -1.0 -1.5 hypothetical protein compare
SMa0144 -1.0 -0.7 hypothetical protein compare
SM_b21679 -1.0 -1.1 hypothetical protein compare
SMc01943 -1.0 -3.2 2-hydroxyacid dehydrogenase compare
SMc02114 -1.0 -2.5 hypothetical protein compare


Specific Phenotypes

For 2 genes in this experiment

For nitrogen source Gly-DL-Asp in Sinorhizobium meliloti 1021

For nitrogen source Gly-DL-Asp across organisms