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Experiment set3IT018 for
Pseudomonas fluorescens FW300-N2C3
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KB-half, Pseudo11 supernatant, 100 uM FeCl3
200 most important genes:
gene
name
fitness
t score
description
AO356
_03400
-3.6
-5.9
aminotransferase DegT
compare
AO356
_03405
-3.2
-4.2
serine acetyltransferase
compare
AO356
_03415
-2.9
-9.2
oxidoreductase
compare
AO356
_03420
-2.8
-8.4
UDP-N-acetyl-D-glucosamine dehydrogenase
compare
AO356
_15325
-2.8
-1.8
hypothetical protein
compare
AO356
_20800
-2.6
-1.3
hypothetical protein
compare
AO356
_21705
-2.2
-2.6
response regulator
compare
AO356
_15200
-2.2
-6.7
hypothetical protein
compare
AO356
_19080
-2.1
-6.9
dehydrogenase
compare
AO356
_25830
-2.0
-1.2
DNA repair protein
compare
AO356
_05995
-1.9
-2.2
hypothetical protein
compare
AO356
_04055
-1.9
-2.1
hypothetical protein
compare
AO356
_16955
-1.9
-4.6
disulfide bond formation protein B
compare
AO356
_08870
-1.8
-5.4
polymerase
compare
AO356
_24955
-1.8
-2.7
D-amino acid oxidase
compare
AO356
_03360
-1.8
-2.4
hypothetical protein
compare
AO356
_03375
-1.7
-2.6
ExsB family protein
compare
AO356
_08875
-1.7
-2.3
toluene tolerance protein
compare
AO356
_15420
-1.7
-4.6
hypothetical protein
compare
AO356
_20850
-1.7
-4.0
hypothetical protein
compare
AO356
_08880
-1.7
-2.9
glycosyl transferase
compare
AO356
_18000
-1.6
-1.6
FmdB family transcriptional regulator
compare
AO356
_03350
-1.6
-6.9
glycosyl transferase
compare
AO356
_15435
-1.6
-2.7
hydrogenase
compare
AO356
_15275
-1.5
-3.9
ATP-dependent protease
compare
AO356
_04445
-1.5
-2.3
5-carboxymethyl-2-hydroxymuconate isomerase
compare
AO356
_14540
-1.5
-3.0
biotin--protein ligase
compare
AO356
_26350
-1.5
-1.9
acetyl-CoA acetyltransferase
compare
AO356
_26285
-1.5
-1.4
sugar ABC transporter substrate-binding protein
compare
AO356
_28440
-1.5
-1.4
galactose 1-dehydrogenase
compare
AO356
_25110
-1.5
-1.6
protein DnrP
compare
AO356
_03365
-1.4
-4.0
UDP-N-acetylglucosamine 2-epimerase
compare
AO356
_03800
-1.4
-0.9
histidine kinase
compare
AO356
_24215
-1.4
-3.6
chemotaxis protein CheC
compare
AO356
_27595
-1.4
-2.6
amino acid ABC transporter substrate-binding protein
compare
AO356
_09350
-1.4
-1.9
hypothetical protein
compare
AO356
_05655
-1.4
-3.1
hypothetical protein
compare
AO356
_18805
-1.4
-1.0
magnesium transporter
compare
AO356
_25720
-1.4
-1.2
polyamine ABC transporter permease
compare
AO356
_25505
-1.4
-1.6
hypothetical protein
compare
AO356
_13375
-1.3
-3.2
thiazole synthase
compare
AO356
_11450
-1.3
-1.4
cytochrome C
compare
AO356
_22770
-1.3
-2.8
hypothetical protein
compare
AO356
_18855
-1.3
-1.6
hypothetical protein
compare
AO356
_13395
-1.3
-1.6
non-canonical purine NTP pyrophosphatase
compare
AO356
_18775
-1.3
-1.9
aspartate kinase
compare
AO356
_14135
-1.3
-5.0
biotin synthase
compare
AO356
_17070
-1.3
-2.0
cytochrome B
compare
AO356
_08135
-1.3
-1.8
MFS transporter
compare
AO356
_07055
-1.3
-1.5
phosphocarrier protein HPr
compare
AO356
_15925
-1.2
-2.8
ribosomal large subunit pseudouridine synthase D
compare
AO356
_19320
-1.2
-1.9
hypothetical protein
compare
AO356
_03595
-1.2
-1.6
carbon storage regulator
compare
AO356
_28680
-1.2
-1.9
short-chain dehydrogenase
compare
AO356
_01750
-1.2
-3.1
ATP-dependent Clp protease proteolytic subunit
compare
AO356
_00440
-1.2
-2.5
peptidylprolyl isomerase
compare
AO356
_00560
-1.2
-1.7
required for sulfate utilization, putative electron transport protein for sulfite reductase
(from data)
compare
AO356
_17765
-1.2
-1.6
antibiotic biosynthesis monooxygenase
compare
AO356
_02590
-1.2
-1.8
hypothetical protein
compare
AO356
_17575
-1.1
-1.4
hypothetical protein
compare
AO356
_01720
-1.1
-3.5
hypothetical protein
compare
AO356
_25090
-1.1
-1.4
hypothetical protein
compare
AO356
_22665
-1.1
-1.9
chemotaxis protein
compare
AO356
_17890
-1.1
-1.4
H-NS histone
compare
AO356
_09145
-1.1
-2.4
acyl carrier protein
compare
AO356
_15265
-1.1
-3.3
murein hydrolase transporter LrgA
compare
AO356
_17075
-1.1
-2.2
cytochrome C
compare
AO356
_25150
-1.1
-1.4
molybdenum cofactor biosynthesis protein B
compare
AO356
_03355
-1.1
-3.1
hypothetical protein
compare
AO356
_08890
-1.1
-3.7
glycosyltransferase
compare
AO356
_06575
-1.1
-1.7
outer membrane protein assembly factor BamB
compare
AO356
_03345
-1.1
-6.3
hypothetical protein
compare
AO356
_11205
-1.1
-3.6
copper-binding protein
compare
AO356
_18300
-1.1
-3.1
(2Fe-2S)-binding protein
compare
AO356
_02445
-1.1
-1.4
prevent-host-death protein
compare
AO356
_27790
-1.0
-1.8
N-acetylglucosamine-6-sulfatase
compare
AO356
_16725
-1.0
-1.9
HopJ type III effector protein
compare
AO356
_12745
-1.0
-2.3
iron donor protein CyaY
compare
AO356
_03215
-1.0
-4.7
hypothetical protein
compare
AO356
_09765
-1.0
-1.3
sulfurtransferase
compare
AO356
_09140
-1.0
-4.1
acyltransferase
compare
AO356
_25485
-1.0
-2.0
aldehyde dehydrogenase
compare
AO356
_13565
-1.0
-2.6
16S rRNA methyltransferase
compare
AO356
_09460
-1.0
-2.2
ATP-dependent protease ATP-binding subunit HslU
compare
AO356
_09170
-1.0
-1.5
glycosyl transferase
compare
AO356
_05755
-1.0
-1.2
ArsR family transcriptional regulator
compare
AO356
_09290
-1.0
-2.6
LysR family transcriptional regulator
compare
AO356
_15500
-1.0
-3.6
hypothetical protein
compare
AO356
_22775
-1.0
-2.2
hypothetical protein
compare
AO356
_13860
-1.0
-3.5
AraC family transcriptional regulator
compare
AO356
_13065
-1.0
-2.8
hypothetical protein
compare
AO356
_16485
-0.9
-3.3
hypothetical protein
compare
AO356
_11055
-0.9
-1.7
long-chain acyl-CoA thioester hydrolase
compare
AO356
_21160
-0.9
-1.8
RND transporter
compare
AO356
_23500
-0.9
-3.7
TetR family transcriptional regulator
compare
AO356
_26270
-0.9
-1.2
histidine kinase
compare
AO356
_27995
-0.9
-1.3
thioredoxin reductase
compare
AO356
_20100
-0.9
-2.7
(2Fe-2S)-binding protein
compare
AO356
_18435
-0.9
-1.8
hypothetical protein
compare
AO356
_09775
-0.9
-4.2
peptidase M23
compare
AO356
_25390
-0.9
-1.3
enamine deaminase RidA
compare
AO356
_09330
-0.9
-2.1
type II secretion system protein GspG
compare
AO356
_01270
-0.9
-3.4
(Fe-S)-binding protein
compare
AO356
_13345
-0.9
-1.7
cell division ATP-binding protein FtsE
compare
AO356
_02460
-0.9
-0.9
hypothetical protein
compare
AO356
_18890
-0.9
-1.5
flagellar biosynthesis protein FlgN
compare
AO356
_29125
-0.9
-1.3
vanillate monooxygenase
compare
AO356
_18330
-0.9
-3.5
hypothetical protein
compare
AO356
_27640
-0.9
-2.1
chemotaxis protein CheB
compare
AO356
_07385
-0.9
-0.7
tRNA-Thr
compare
AO356
_18850
-0.9
-2.6
hypothetical protein
compare
AO356
_10755
-0.9
-0.9
hypothetical protein
compare
AO356
_02205
-0.9
-1.7
NADPH-dependent 7-cyano-7-deazaguanine reductase
compare
AO356
_24450
-0.9
-1.5
microcin ABC transporter ATP-binding protein
compare
AO356
_08385
-0.9
-1.1
urease subunit beta
compare
AO356
_05970
-0.9
-1.9
ribonuclease HII
compare
AO356
_01095
-0.9
-1.0
glycolate oxidase
compare
AO356
_13505
-0.9
-0.9
chemotaxis protein
compare
AO356
_08160
-0.9
-1.8
translation initiation factor Sui1
compare
AO356
_20920
-0.9
-2.4
peptidase
compare
AO356
_02325
-0.9
-1.0
3-ketoacyl-CoA thiolase
compare
AO356
_24725
-0.9
-1.0
alkylhydroperoxidase
compare
AO356
_14105
-0.9
-0.6
glycine cleavage system protein R
compare
AO356
_06995
-0.9
-3.2
outer membrane lipid asymmetry maintenance protein MlaD
compare
AO356
_29285
-0.9
-2.3
LysR family transcriptional regulator
compare
AO356
_21125
-0.9
-1.3
cyclic peptide transporter
compare
AO356
_26245
-0.9
-1.0
energy transducer TonB
compare
AO356
_22675
-0.9
-0.5
sulfate transporter
compare
AO356
_13965
-0.8
-1.6
hypothetical protein
compare
AO356
_12460
-0.8
-2.5
hypothetical protein
compare
AO356
_13195
-0.8
-3.9
thiol-disulfide isomerase
compare
AO356
_16810
-0.8
-2.9
hypothetical protein
compare
AO356
_24150
-0.8
-2.8
hypothetical protein
compare
AO356
_21405
-0.8
-1.4
3-isopropylmalate dehydratase
compare
AO356
_26110
-0.8
-1.3
sarcosine oxidase subunit alpha
compare
AO356
_03225
-0.8
-2.8
esterase
compare
AO356
_17590
-0.8
-2.5
hypothetical protein
compare
AO356
_03730
-0.8
-4.2
flagellar biosynthesis sigma factor
compare
AO356
_13525
-0.8
-1.7
biotin-independent malonate decarboxylase subunit beta
compare
AO356
_14150
-0.8
-3.5
malonyl-[acyl-carrier protein] O-methyltransferase BioC
compare
AO356
_13880
-0.8
-1.9
DNA-binding protein
compare
AO356
_26275
-0.8
-2.0
cag pathogenicity island protein Cag5
compare
AO356
_09230
-0.8
-2.6
excinuclease
compare
AO356
_25865
-0.8
-0.8
peroxidase
compare
AO356
_15235
-0.8
-2.3
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase
compare
AO356
_25980
-0.8
-1.7
autotransporter subunit beta
compare
AO356
_22870
-0.8
-1.4
glycerate kinase
compare
AO356
_05565
-0.8
-2.2
hypothetical protein
compare
AO356
_28420
-0.8
-2.1
hypothetical protein
compare
AO356
_19765
-0.8
-2.4
helicase
compare
AO356
_23475
-0.8
-1.9
polyketide synthase
compare
AO356
_21080
-0.8
-1.4
sugar dehydrogenase
compare
AO356
_02125
-0.8
-1.9
hypothetical protein
compare
AO356
_12895
-0.8
-6.4
polyphosphate kinase
compare
AO356
_08400
-0.8
-1.4
chaperone modulatory protein CbpM
compare
AO356
_27965
-0.8
-0.7
benzaldehyde dehydrogenase
compare
AO356
_00935
-0.8
-1.8
hypothetical protein
compare
AO356
_20775
-0.8
-1.6
short-chain dehydrogenase
compare
AO356
_24865
-0.8
-1.5
Valyl-tRNA synthetase
compare
AO356
_26235
-0.8
-1.3
protein TolQ
compare
AO356
_25840
-0.8
-1.2
peptidylprolyl isomerase
compare
AO356
_22970
-0.8
-2.0
Branched-chain amino acid aminotransferase (EC 2.6.1.42)
(from data)
compare
AO356
_28000
-0.8
-1.0
Rrf2 family transcriptional regulator
compare
AO356
_24580
-0.8
-1.6
GntR family transcriptional regulator
compare
AO356
_04085
-0.8
-2.0
hypothetical protein
compare
AO356
_18155
-0.8
-0.8
cold-shock protein
compare
AO356
_17825
-0.8
-1.8
enoyl-CoA hydratase
compare
AO356
_27600
-0.8
-1.5
RND transporter MFP subunit
compare
AO356
_28400
-0.8
-1.3
dimethyl sulfone monooxygenase SfnG
compare
AO356
_26850
-0.8
-1.9
3-oxoacyl-ACP synthase
compare
AO356
_03280
-0.8
-2.8
metal-chelation protein CHAD
compare
AO356
_05895
-0.8
-2.1
protein-L-isoaspartate O-methyltransferase
compare
AO356
_27360
-0.8
-1.4
nitrile hydratase subunit alpha
compare
AO356
_01015
-0.8
-1.1
peptidylprolyl isomerase
compare
AO356
_06440
-0.8
-2.1
hypothetical protein
compare
AO356
_18845
-0.8
-1.8
hypothetical protein
compare
AO356
_18340
-0.8
-2.1
leucyl-tRNA synthetase
compare
AO356
_30125
-0.8
-1.8
xylose isomerase
compare
AO356
_22280
-0.8
-2.1
gluconolactonase
compare
AO356
_16340
-0.7
-2.1
hypothetical protein
compare
AO356
_09210
-0.7
-1.4
3-oxoacyl-ACP synthase
compare
AO356
_26370
-0.7
-2.1
crotonase
compare
AO356
_17845
-0.7
-3.0
hypothetical protein
compare
AO356
_27180
-0.7
-2.4
hypothetical protein
compare
AO356
_26820
-0.7
-0.9
hypothetical protein
compare
AO356
_15405
-0.7
-2.4
ATP-binding protein
compare
AO356
_12375
-0.7
-4.1
histidine kinase
compare
AO356
_12300
-0.7
-1.4
type VI secretion protein
compare
AO356
_15495
-0.7
-3.3
endonuclease
compare
AO356
_29755
-0.7
-1.4
hypothetical protein
compare
AO356
_28700
-0.7
-1.5
hypothetical protein
compare
AO356
_24940
-0.7
-1.4
AraC family transcriptional regulator
compare
AO356
_26160
-0.7
-2.4
MFS transporter
compare
AO356
_12730
-0.7
-1.4
hypothetical protein
compare
AO356
_23520
-0.7
-1.6
fructoselysine kinase
compare
AO356
_10085
-0.7
-3.1
haloacid dehalogenase
compare
AO356
_25395
-0.7
-1.0
fimbrial assembly protein FimA
compare
AO356
_00875
-0.7
-2.2
MerR family transcriptional regulator
compare
AO356
_28585
-0.7
-2.0
ABC transporter
compare
AO356
_10010
-0.7
-2.3
GCN5 family acetyltransferase
compare
Specific Phenotypes
For 3 genes in this experiment