Experiment set3IT018 for Pseudomonas fluorescens FW300-N2C3

200 most important genes:

gene	name	fitness	t score	description
AO356_03400		-3.6	-5.9	aminotransferase DegT
AO356_03405		-3.2	-4.2	serine acetyltransferase
AO356_03415		-2.9	-9.2	oxidoreductase
AO356_03420		-2.8	-8.4	UDP-N-acetyl-D-glucosamine dehydrogenase
AO356_15325		-2.8	-1.8	hypothetical protein
AO356_20800		-2.6	-1.3	hypothetical protein
AO356_21705		-2.2	-2.6	response regulator
AO356_15200		-2.2	-6.7	hypothetical protein
AO356_19080		-2.1	-6.9	dehydrogenase
AO356_25830		-2.0	-1.2	DNA repair protein
AO356_05995		-1.9	-2.2	hypothetical protein
AO356_04055		-1.9	-2.1	hypothetical protein
AO356_16955		-1.9	-4.6	disulfide bond formation protein B
AO356_08870		-1.8	-5.4	polymerase
AO356_24955		-1.8	-2.7	D-amino acid oxidase
AO356_03360		-1.8	-2.4	hypothetical protein
AO356_03375		-1.7	-2.6	ExsB family protein
AO356_08875		-1.7	-2.3	toluene tolerance protein
AO356_15420		-1.7	-4.6	hypothetical protein
AO356_20850		-1.7	-4.0	hypothetical protein
AO356_08880		-1.7	-2.9	glycosyl transferase
AO356_18000		-1.6	-1.6	FmdB family transcriptional regulator
AO356_03350		-1.6	-6.9	glycosyl transferase
AO356_15435		-1.6	-2.7	hydrogenase
AO356_15275		-1.5	-3.9	ATP-dependent protease
AO356_04445		-1.5	-2.3	5-carboxymethyl-2-hydroxymuconate isomerase
AO356_14540		-1.5	-3.0	biotin--protein ligase
AO356_26350		-1.5	-1.9	acetyl-CoA acetyltransferase
AO356_26285		-1.5	-1.4	sugar ABC transporter substrate-binding protein
AO356_28440		-1.5	-1.4	galactose 1-dehydrogenase
AO356_25110		-1.5	-1.6	protein DnrP
AO356_03365		-1.4	-4.0	UDP-N-acetylglucosamine 2-epimerase
AO356_03800		-1.4	-0.9	histidine kinase
AO356_24215		-1.4	-3.6	chemotaxis protein CheC
AO356_27595		-1.4	-2.6	amino acid ABC transporter substrate-binding protein
AO356_09350		-1.4	-1.9	hypothetical protein
AO356_05655		-1.4	-3.1	hypothetical protein
AO356_18805		-1.4	-1.0	magnesium transporter
AO356_25720		-1.4	-1.2	polyamine ABC transporter permease
AO356_25505		-1.4	-1.6	hypothetical protein
AO356_13375		-1.3	-3.2	thiazole synthase
AO356_11450		-1.3	-1.4	cytochrome C
AO356_22770		-1.3	-2.8	hypothetical protein
AO356_18855		-1.3	-1.6	hypothetical protein
AO356_13395		-1.3	-1.6	non-canonical purine NTP pyrophosphatase
AO356_18775		-1.3	-1.9	aspartate kinase
AO356_14135		-1.3	-5.0	biotin synthase
AO356_17070		-1.3	-2.0	cytochrome B
AO356_08135		-1.3	-1.8	MFS transporter
AO356_07055		-1.3	-1.5	phosphocarrier protein HPr
AO356_15925		-1.2	-2.8	ribosomal large subunit pseudouridine synthase D
AO356_19320		-1.2	-1.9	hypothetical protein
AO356_03595		-1.2	-1.6	carbon storage regulator
AO356_28680		-1.2	-1.9	short-chain dehydrogenase
AO356_01750		-1.2	-3.1	ATP-dependent Clp protease proteolytic subunit
AO356_00440		-1.2	-2.5	peptidylprolyl isomerase
AO356_00560		-1.2	-1.7	required for sulfate utilization, putative electron transport protein for sulfite reductase (from data)
AO356_17765		-1.2	-1.6	antibiotic biosynthesis monooxygenase
AO356_02590		-1.2	-1.8	hypothetical protein
AO356_17575		-1.1	-1.4	hypothetical protein
AO356_01720		-1.1	-3.5	hypothetical protein
AO356_25090		-1.1	-1.4	hypothetical protein
AO356_22665		-1.1	-1.9	chemotaxis protein
AO356_17890		-1.1	-1.4	H-NS histone
AO356_09145		-1.1	-2.4	acyl carrier protein
AO356_15265		-1.1	-3.3	murein hydrolase transporter LrgA
AO356_17075		-1.1	-2.2	cytochrome C
AO356_25150		-1.1	-1.4	molybdenum cofactor biosynthesis protein B
AO356_03355		-1.1	-3.1	hypothetical protein
AO356_08890		-1.1	-3.7	glycosyltransferase
AO356_06575		-1.1	-1.7	outer membrane protein assembly factor BamB
AO356_03345		-1.1	-6.3	hypothetical protein
AO356_11205		-1.1	-3.6	copper-binding protein
AO356_18300		-1.1	-3.1	(2Fe-2S)-binding protein
AO356_02445		-1.1	-1.4	prevent-host-death protein
AO356_27790		-1.0	-1.8	N-acetylglucosamine-6-sulfatase
AO356_16725		-1.0	-1.9	HopJ type III effector protein
AO356_12745		-1.0	-2.3	iron donor protein CyaY
AO356_03215		-1.0	-4.7	hypothetical protein
AO356_09765		-1.0	-1.3	sulfurtransferase
AO356_09140		-1.0	-4.1	acyltransferase
AO356_25485		-1.0	-2.0	aldehyde dehydrogenase
AO356_13565		-1.0	-2.6	16S rRNA methyltransferase
AO356_09460		-1.0	-2.2	ATP-dependent protease ATP-binding subunit HslU
AO356_09170		-1.0	-1.5	glycosyl transferase
AO356_05755		-1.0	-1.2	ArsR family transcriptional regulator
AO356_09290		-1.0	-2.6	LysR family transcriptional regulator
AO356_15500		-1.0	-3.6	hypothetical protein
AO356_22775		-1.0	-2.2	hypothetical protein
AO356_13860		-1.0	-3.5	AraC family transcriptional regulator
AO356_13065		-1.0	-2.8	hypothetical protein
AO356_16485		-0.9	-3.3	hypothetical protein
AO356_11055		-0.9	-1.7	long-chain acyl-CoA thioester hydrolase
AO356_21160		-0.9	-1.8	RND transporter
AO356_23500		-0.9	-3.7	TetR family transcriptional regulator
AO356_26270		-0.9	-1.2	histidine kinase
AO356_27995		-0.9	-1.3	thioredoxin reductase
AO356_20100		-0.9	-2.7	(2Fe-2S)-binding protein
AO356_18435		-0.9	-1.8	hypothetical protein
AO356_09775		-0.9	-4.2	peptidase M23
AO356_25390		-0.9	-1.3	enamine deaminase RidA
AO356_09330		-0.9	-2.1	type II secretion system protein GspG
AO356_01270		-0.9	-3.4	(Fe-S)-binding protein
AO356_13345		-0.9	-1.7	cell division ATP-binding protein FtsE
AO356_02460		-0.9	-0.9	hypothetical protein
AO356_18890		-0.9	-1.5	flagellar biosynthesis protein FlgN
AO356_29125		-0.9	-1.3	vanillate monooxygenase
AO356_18330		-0.9	-3.5	hypothetical protein
AO356_27640		-0.9	-2.1	chemotaxis protein CheB
AO356_07385		-0.9	-0.7	tRNA-Thr
AO356_18850		-0.9	-2.6	hypothetical protein
AO356_10755		-0.9	-0.9	hypothetical protein
AO356_02205		-0.9	-1.7	NADPH-dependent 7-cyano-7-deazaguanine reductase
AO356_24450		-0.9	-1.5	microcin ABC transporter ATP-binding protein
AO356_08385		-0.9	-1.1	urease subunit beta
AO356_05970		-0.9	-1.9	ribonuclease HII
AO356_01095		-0.9	-1.0	glycolate oxidase
AO356_13505		-0.9	-0.9	chemotaxis protein
AO356_08160		-0.9	-1.8	translation initiation factor Sui1
AO356_20920		-0.9	-2.4	peptidase
AO356_02325		-0.9	-1.0	3-ketoacyl-CoA thiolase
AO356_24725		-0.9	-1.0	alkylhydroperoxidase
AO356_14105		-0.9	-0.6	glycine cleavage system protein R
AO356_06995		-0.9	-3.2	outer membrane lipid asymmetry maintenance protein MlaD
AO356_29285		-0.9	-2.3	LysR family transcriptional regulator
AO356_21125		-0.9	-1.3	cyclic peptide transporter
AO356_26245		-0.9	-1.0	energy transducer TonB
AO356_22675		-0.9	-0.5	sulfate transporter
AO356_13965		-0.8	-1.6	hypothetical protein
AO356_12460		-0.8	-2.5	hypothetical protein
AO356_13195		-0.8	-3.9	thiol-disulfide isomerase
AO356_16810		-0.8	-2.9	hypothetical protein
AO356_24150		-0.8	-2.8	hypothetical protein
AO356_21405		-0.8	-1.4	3-isopropylmalate dehydratase
AO356_26110		-0.8	-1.3	sarcosine oxidase subunit alpha
AO356_03225		-0.8	-2.8	esterase
AO356_17590		-0.8	-2.5	hypothetical protein
AO356_03730		-0.8	-4.2	flagellar biosynthesis sigma factor
AO356_13525		-0.8	-1.7	biotin-independent malonate decarboxylase subunit beta
AO356_14150		-0.8	-3.5	malonyl-[acyl-carrier protein] O-methyltransferase BioC
AO356_13880		-0.8	-1.9	DNA-binding protein
AO356_26275		-0.8	-2.0	cag pathogenicity island protein Cag5
AO356_09230		-0.8	-2.6	excinuclease
AO356_25865		-0.8	-0.8	peroxidase
AO356_15235		-0.8	-2.3	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase
AO356_25980		-0.8	-1.7	autotransporter subunit beta
AO356_22870		-0.8	-1.4	glycerate kinase
AO356_05565		-0.8	-2.2	hypothetical protein
AO356_28420		-0.8	-2.1	hypothetical protein
AO356_19765		-0.8	-2.4	helicase
AO356_23475		-0.8	-1.9	polyketide synthase
AO356_21080		-0.8	-1.4	sugar dehydrogenase
AO356_02125		-0.8	-1.9	hypothetical protein
AO356_12895		-0.8	-6.4	polyphosphate kinase
AO356_08400		-0.8	-1.4	chaperone modulatory protein CbpM
AO356_27965		-0.8	-0.7	benzaldehyde dehydrogenase
AO356_00935		-0.8	-1.8	hypothetical protein
AO356_20775		-0.8	-1.6	short-chain dehydrogenase
AO356_24865		-0.8	-1.5	Valyl-tRNA synthetase
AO356_26235		-0.8	-1.3	protein TolQ
AO356_25840		-0.8	-1.2	peptidylprolyl isomerase
AO356_22970		-0.8	-2.0	Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data)
AO356_28000		-0.8	-1.0	Rrf2 family transcriptional regulator
AO356_24580		-0.8	-1.6	GntR family transcriptional regulator
AO356_04085		-0.8	-2.0	hypothetical protein
AO356_18155		-0.8	-0.8	cold-shock protein
AO356_17825		-0.8	-1.8	enoyl-CoA hydratase
AO356_27600		-0.8	-1.5	RND transporter MFP subunit
AO356_28400		-0.8	-1.3	dimethyl sulfone monooxygenase SfnG
AO356_26850		-0.8	-1.9	3-oxoacyl-ACP synthase
AO356_03280		-0.8	-2.8	metal-chelation protein CHAD
AO356_05895		-0.8	-2.1	protein-L-isoaspartate O-methyltransferase
AO356_27360		-0.8	-1.4	nitrile hydratase subunit alpha
AO356_01015		-0.8	-1.1	peptidylprolyl isomerase
AO356_06440		-0.8	-2.1	hypothetical protein
AO356_18845		-0.8	-1.8	hypothetical protein
AO356_18340		-0.8	-2.1	leucyl-tRNA synthetase
AO356_30125		-0.8	-1.8	xylose isomerase
AO356_22280		-0.8	-2.1	gluconolactonase
AO356_16340		-0.7	-2.1	hypothetical protein
AO356_09210		-0.7	-1.4	3-oxoacyl-ACP synthase
AO356_26370		-0.7	-2.1	crotonase
AO356_17845		-0.7	-3.0	hypothetical protein
AO356_27180		-0.7	-2.4	hypothetical protein
AO356_26820		-0.7	-0.9	hypothetical protein
AO356_15405		-0.7	-2.4	ATP-binding protein
AO356_12375		-0.7	-4.1	histidine kinase
AO356_12300		-0.7	-1.4	type VI secretion protein
AO356_15495		-0.7	-3.3	endonuclease
AO356_29755		-0.7	-1.4	hypothetical protein
AO356_28700		-0.7	-1.5	hypothetical protein
AO356_24940		-0.7	-1.4	AraC family transcriptional regulator
AO356_26160		-0.7	-2.4	MFS transporter
AO356_12730		-0.7	-1.4	hypothetical protein
AO356_23520		-0.7	-1.6	fructoselysine kinase
AO356_10085		-0.7	-3.1	haloacid dehalogenase
AO356_25395		-0.7	-1.0	fimbrial assembly protein FimA
AO356_00875		-0.7	-2.2	MerR family transcriptional regulator
AO356_28585		-0.7	-2.0	ABC transporter
AO356_10010		-0.7	-2.3	GCN5 family acetyltransferase

Specific Phenotypes

For 3 genes in this experiment