Experiment set3IT017 for Methanococcus maripaludis S2

Compare to:

H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE

200 most detrimental genes:

  gene name fitness t score description  
MMP_RS08940 +2.2 4.7 MetS family NSS transporter small subunit compare
MMP_RS08860 +2.1 13.6 MinD/ParA family protein compare
MMP_RS09055 +2.0 3.4 CAP domain-containing protein compare
MMP_RS08855 +2.0 13.5 hypothetical protein compare
MMP_RS01285 +2.0 17.4 hypothetical protein compare
MMP_RS01290 +2.0 16.7 class III signal peptide-containing protein compare
MMP_RS01270 +2.0 18.2 prepilin peptidase compare
MMP_RS01310 +1.9 17.9 hypothetical protein compare
MMP_RS00240 +1.9 16.5 type II secretion system F family protein compare
MMP_RS01280 +1.9 16.0 DUF515 domain-containing protein compare
MMP_RS01085 +1.9 5.2 hypothetical protein compare
MMP_RS01305 +1.9 17.0 hypothetical protein compare
MMP_RS08675 +1.9 8.8 class III signal peptide-containing protein compare
MMP_RS00245 +1.8 16.8 type II secretion system F family protein compare
MMP_RS00250 +1.8 16.5 Flp pilus assembly complex ATPase component TadA compare
MMP_RS01315 +1.8 17.1 DUF2341 domain-containing protein compare
MMP_RS01275 +1.8 12.8 class III signal peptide-containing protein compare
MMP_RS01295 +1.8 15.3 hypothetical protein compare
MMP_RS01195 +1.6 3.1 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS07330 +1.5 14.4 membrane protein compare
MMP_RS03125 +1.4 8.6 cell division ATPase MinD compare
MMP_RS05635 +1.4 10.5 NAD-dependent epimerase/dehydratase family protein compare
MMP_RS08615 +1.3 1.9 flagellar protein G compare
MMP_RS06035 +1.3 8.5 glycosyltransferase family 2 protein compare
MMP_RS09045 +1.2 8.9 class III signal peptide-containing protein compare
MMP_RS08580 +1.1 4.7 flagellin compare
MMP_RS01075 +1.1 1.8 hypothetical protein compare
MMP_RS00140 +1.1 7.1 DUF192 domain-containing protein compare
MMP_RS01790 +1.1 3.2 restriction endonuclease compare
MMP_RS05865 +1.1 1.3 hypothetical protein compare
MMP_RS00570 +1.1 1.2 protein-L-isoaspartate O-methyltransferase compare
MMP_RS06760 +1.1 2.1 hypothetical protein compare
MMP_RS05985 +1.0 1.9 hypothetical protein compare
MMP_RS04125 +1.0 2.6 TetR/AcrR family transcriptional regulator compare
MMP_RS08750 +0.9 1.4 hypothetical protein compare
MMP_RS03080 +0.9 1.2 universal stress protein compare
MMP_RS02605 +0.9 0.9 MotA/TolQ/ExbB proton channel family protein compare
MMP_RS08400 +0.9 1.3 MJ0307 family thioredoxin compare
MMP_RS00535 +0.9 1.5 TIGR00375 family protein compare
MMP_RS04410 +0.9 2.0 hypothetical protein compare
MMP_RS03535 +0.8 1.7 helix-turn-helix transcriptional regulator compare
MMP_RS06175 +0.8 4.7 winged helix-turn-helix transcriptional regulator compare
MMP_RS06600 +0.8 0.7 class III signal peptide-containing protein compare
MMP_RS08830 +0.8 2.7 GTP-binding protein compare
MMP_RS08845 +0.7 3.0 archaellum operon transcriptional activator EarA family protein compare
MMP_RS03550 +0.7 1.0 DUF2124 domain-containing protein compare
MMP_RS08410 +0.7 2.0 DUF169 domain-containing protein compare
MMP_RS02545 +0.7 1.6 hypothetical protein compare
MMP_RS01870 +0.7 2.3 acyl-CoA dehydratase activase compare
MMP_RS01255 +0.7 1.5 amino acid ABC transporter ATP-binding protein compare
MMP_RS01110 +0.7 1.3 FmdE family protein compare
MMP_RS06015 +0.7 1.7 flavodoxin family protein compare
MMP_RS07415 +0.7 2.5 molybdopterin-guanine dinucleotide biosynthesis protein MobB compare
MMP_RS01125 +0.6 2.2 thioredoxin family protein compare
MMP_RS02805 +0.6 1.0 HEPN domain-containing protein compare
MMP_RS08080 +0.6 2.5 YchF/TatD family DNA exonuclease compare
MMP_RS01660 +0.6 1.3 hypothetical protein compare
MMP_RS08290 +0.6 2.5 DNA-binding protein Alba compare
MMP_RS05365 +0.6 1.4 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
MMP_RS01320 +0.6 2.0 hypothetical protein compare
MMP_RS00655 +0.6 2.0 hypothetical protein compare
MMP_RS05965 +0.6 1.1 carboxymuconolactone decarboxylase family protein compare
MMP_RS05785 +0.6 3.7 ATP-binding protein compare
MMP_RS02530 +0.6 1.8 type II toxin-antitoxin system mRNA interferase toxin RelE/StbE family compare
MMP_RS01300 +0.6 4.4 hypothetical protein compare
MMP_RS01655 +0.5 1.0 DsrE family protein compare
MMP_RS04145 +0.5 1.1 hypothetical protein compare
MMP_RS03625 +0.5 1.6 cell wall-binding protein compare
MMP_RS04255 +0.5 1.8 coenzyme F420 hydrogenase subunit beta compare
MMP_RS04060 +0.5 1.9 hypothetical protein compare
MMP_RS06935 +0.5 1.9 protease complex subunit PrcB family protein compare
MMP_RS08395 +0.5 1.6 DsrE family protein compare
MMP_RS08285 +0.5 2.2 serine/threonine protein kinase compare
MMP_RS07900 +0.5 0.7 YeeE/YedE family protein compare
MMP_RS07800 +0.5 2.0 ATP-binding cassette domain-containing protein compare
MMP_RS07115 +0.5 1.9 MBL fold metallo-hydrolase compare
MMP_RS03320 +0.5 1.3 metal-dependent transcriptional regulator compare
MMP_RS06140 +0.5 1.3 radical SAM protein compare
MMP_RS02625 +0.5 2.1 ribonuclease H-like domain-containing protein compare
MMP_RS02255 +0.5 1.8 hypothetical protein compare
MMP_RS02770 +0.5 1.7 hypothetical protein compare
MMP_RS01675 +0.5 1.0 hypothetical protein compare
MMP_RS00965 +0.5 0.9 hypothetical protein compare
MMP_RS02610 +0.5 1.4 DUF2162 domain-containing protein compare
MMP_RS08265 +0.5 2.6 rubrerythrin compare
MMP_RS06115 +0.5 2.7 class II aldolase/adducin family protein compare
MMP_RS06050 +0.5 1.8 ZIP family metal transporter compare
MMP_RS05910 +0.5 0.8 cell division ATPase MinD compare
MMP_RS08770 +0.5 2.0 hypothetical protein compare
MMP_RS01185 +0.5 1.5 hypothetical protein compare
MMP_RS06720 +0.5 1.7 response regulator transcription factor compare
MMP_RS06100 +0.5 2.2 GNAT family N-acetyltransferase compare
MMP_RS08850 +0.5 3.5 hypothetical protein compare
MMP_RS00690 +0.5 1.6 MBL fold metallo-hydrolase compare
MMP_RS05550 +0.5 0.3 cation:proton antiporter compare
MMP_RS04990 +0.5 1.7 aquaporin family protein compare
MMP_RS03840 +0.4 2.1 hypothetical protein compare
MMP_RS02020 +0.4 1.1 gamma-glutamylcyclotransferase compare
MMP_RS01490 +0.4 1.3 tetratricopeptide repeat protein compare
MMP_RS00090 +0.4 1.0 CoA-binding protein compare
MMP_RS04610 +0.4 0.8 Dabb family protein compare
MMP_RS05580 +0.4 3.7 glycosyltransferase compare
MMP_RS00400 +0.4 2.0 tributyrin esterase compare
MMP_RS06385 +0.4 1.1 hypothetical protein compare
MMP_RS08385 +0.4 1.3 ABC transporter substrate-binding protein compare
MMP_RS07910 +0.4 1.7 NAD(P)H-hydrate dehydratase compare
MMP_RS07775 +0.4 1.2 alanine dehydrogenase compare
MMP_RS00390 +0.4 2.0 ammonium transporter compare
MMP_RS06585 +0.4 0.8 DMT family protein compare
MMP_RS00395 +0.4 0.8 MGMT family protein compare
MMP_RS00345 +0.4 2.5 DUF2666 domain-containing protein compare
MMP_RS03120 +0.4 1.0 hypothetical protein compare
MMP_RS01135 +0.4 2.0 molybdate ABC transporter substrate-binding protein compare
MMP_RS01770 +0.4 2.2 ATP-dependent endonuclease compare
MMP_RS01635 +0.4 1.5 thiamine pyrophosphate-dependent enzyme compare
MMP_RS02540 +0.4 1.1 DUF2283 domain-containing protein compare
MMP_RS08455 +0.4 1.9 multiprotein bridging factor aMBF1 compare
MMP_RS02455 +0.4 1.5 hypothetical protein compare
MMP_RS02260 +0.4 1.7 lactate utilization protein compare
MMP_RS07150 +0.4 2.2 MTH895/ArsE family thioredoxin-like protein compare
MMP_RS08665 +0.4 2.9 hypothetical protein compare
MMP_RS03490 +0.4 0.8 DUF2115 domain-containing protein compare
MMP_RS06090 +0.4 1.2 iron ABC transporter permease compare
MMP_RS02425 +0.4 1.4 hypothetical protein compare
MMP_RS08380 +0.4 1.7 phosphatase PAP2 family protein compare
MMP_RS06840 +0.4 0.3 DNA-directed RNA polymerase subunit N compare
MMP_RS07345 +0.4 0.9 glycine synthesis protein GlyXL (from data) compare
MMP_RS08490 +0.4 2.6 hypothetical protein compare
MMP_RS04290 +0.4 1.3 4Fe-4S binding protein compare
MMP_RS02630 +0.4 1.7 rubredoxin compare
MMP_RS07805 +0.4 1.4 ABC transporter permease compare
MMP_RS02635 +0.4 1.5 class I SAM-dependent methyltransferase compare
MMP_RS07155 +0.4 2.1 MFS transporter compare
MMP_RS01570 +0.3 0.6 hypothetical protein compare
MMP_RS08250 +0.3 1.6 pyruvate kinase compare
MMP_RS05050 +0.3 2.0 substrate-binding domain-containing protein compare
MMP_RS03090 +0.3 1.6 cation:proton antiporter compare
MMP_RS02595 +0.3 0.6 putative zinc-binding protein compare
MMP_RS05435 +0.3 1.2 5'/3'-nucleotidase SurE compare
MMP_RS07905 +0.3 1.1 DUF3343 domain-containing protein compare
MMP_RS04390 +0.3 1.5 hypothetical protein compare
MMP_RS06970 +0.3 1.3 ribosomal protein S18-alanine N-acetyltransferase compare
MMP_RS00930 +0.3 1.0 ABC transporter permease compare
MMP_RS07640 +0.3 1.3 mechanosensitive ion channel family protein compare
MMP_RS01630 +0.3 1.7 N-glycosylase/DNA lyase compare
MMP_RS08610 +0.3 1.8 flagellar protein F compare
MMP_RS03565 +0.3 1.3 uracil phosphoribosyltransferase compare
MMP_RS06665 +0.3 1.5 glycogen/starch synthase compare
MMP_RS07715 +0.3 1.7 YfcE family phosphodiesterase compare
MMP_RS08130 +0.3 2.2 IGHMBP2 family helicase compare
MMP_RS06445 +0.3 1.1 DUF89 domain-containing protein compare
MMP_RS07880 +0.3 1.2 AAA family ATPase compare
MMP_RS07590 +0.3 2.0 hypothetical protein compare
MMP_RS06990 +0.3 1.4 CatB-related O-acetyltransferase compare
MMP_RS05715 +0.3 1.3 hypothetical protein compare
MMP_RS08655 +0.3 1.9 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS05325 +0.3 1.1 hypothetical protein compare
MMP_RS08980 +0.3 1.0 hypothetical protein compare
MMP_RS03530 +0.3 1.6 tetratricopeptide repeat protein compare
MMP_RS02730 +0.3 1.3 ModD protein compare
MMP_RS07765 +0.3 1.4 sodium:alanine symporter family protein compare
MMP_RS00235 +0.3 1.4 HDIG domain-containing protein compare
MMP_RS05270 +0.3 1.8 PEGA domain-containing protein compare
MMP_RS04995 +0.3 1.2 hypothetical protein compare
MMP_RS03910 +0.3 0.8 hypothetical protein compare
MMP_RS03525 +0.3 1.5 ketopantoate reductase family protein compare
MMP_RS06715 +0.3 2.0 cache domain-containing protein compare
MMP_RS07570 +0.3 1.5 nucleotidyltransferase family protein compare
MMP_RS01140 +0.3 0.6 molybdate ABC transporter permease subunit compare
MMP_RS06070 +0.3 2.0 iron ABC transporter substrate-binding protein compare
MMP_RS08160 +0.3 1.1 EamA family transporter compare
MMP_RS07855 +0.3 1.5 class I SAM-dependent methyltransferase compare
MMP_RS02695 +0.3 1.4 formylmethanofuran dehydrogenase subunit A compare
MMP_RS06095 +0.3 1.1 ABC transporter ATP-binding protein compare
MMP_RS04220 +0.3 1.4 queuosine precursor transporter compare
MMP_RS07595 +0.3 1.7 hypothetical protein compare
MMP_RS07985 +0.3 1.9 nitroreductase family protein compare
MMP_RS01090 +0.3 1.4 ABC transporter substrate-binding protein compare
MMP_RS07550 +0.3 1.3 L-serine ammonia-lyase iron-sulfur-dependent subunit alpha compare
MMP_RS08405 +0.3 1.5 MFS transporter compare
MMP_RS00640 +0.3 1.1 ABC transporter substrate-binding protein compare
MMP_RS06250 +0.3 1.2 hypothetical protein compare
MMP_RS02660 +0.3 2.1 hypothetical protein compare
MMP_RS09060 +0.3 2.0 hypothetical protein compare
MMP_RS03900 +0.3 1.1 minichromosome maintenance protein MCM compare
MMP_RS01690 +0.3 1.3 indolepyruvate ferredoxin oxidoreductase subunit alpha compare
MMP_RS05235 +0.3 1.1 exodeoxyribonuclease III compare
MMP_RS02830 +0.3 1.2 DUF432 domain-containing protein compare
MMP_RS06200 +0.3 1.1 M24 family metallopeptidase compare
MMP_RS06085 +0.3 1.9 iron ABC transporter substrate-binding protein compare
MMP_RS09040 +0.3 1.9 AAA family ATPase compare
MMP_RS06965 +0.3 1.6 TIGR04014 family B12-binding domain/radical SAM domain-containing protein compare
MMP_RS08075 +0.3 1.6 DUF749 domain-containing protein compare
MMP_RS03680 +0.3 0.8 hypothetical protein compare
MMP_RS08640 +0.3 1.6 TIM barrel protein compare
MMP_RS02215 +0.3 1.4 ECF transporter S component compare
MMP_RS06465 +0.3 1.6 NERD domain-containing protein compare
MMP_RS01055 +0.3 1.2 hypothetical protein compare
MMP_RS02850 +0.3 1.3 hypothetical protein compare
MMP_RS00480 +0.3 1.4 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis S2 in nutrient t1 experiments

For nutrient t1 Sodium acetate across organisms