Experiment set3IT017 for Herbaspirillum seropedicae SmR1

Sodium nitrate nitrogen source; low aeration

Group: nitrogen source
Media: NFbHP_noNitrogen + Sodium nitrate (10 mM), pH=6.5
Culturing: HerbieS_ML4, flask, Aerobic, at 30 (C), shaken=120 rpm
Growth: about 5.4 generations
By: Thalita Tuleski on 19-May-16

Specific Phenotypes

For 7 genes in this experiment

For nitrogen source Sodium nitrate in Herbaspirillum seropedicae SmR1

For nitrogen source Sodium nitrate across organisms

SEED Subsystems

Subsystem	#Specific
Nitrate and nitrite ammonification	4
Ammonia assimilation	1
YeiH	1

Metabolic Maps

Color code by fitness: see overview map or list of maps.

Maps containing gene(s) with specific phenotypes:

• Nitrogen metabolism

MetaCyc Pathways

Pathways that contain genes with specific phenotypes:

Pathway	#Steps	#Present	#Specific
alkylnitronates degradation	2	2	1
nitrate reduction V (assimilatory)	2	1	1