Experiment set3IT013 for Cupriavidus basilensis FW507-4G11

Compare to:

L-Glutamine nitrogen source

200 most important genes:

  gene name fitness t score description  
RR42_RS16265 -7.2 -4.8 required for sulfate utilization, putative electron transport protein for sulfite reductase (from data) compare
RR42_RS01385 -6.1 -4.2 5,10-methylenetetrahydrofolate reductase compare
RR42_RS18305 -5.9 -4.0 anthranilate phosphoribosyltransferase compare
RR42_RS16280 -5.7 -6.8 transcriptional regulator compare
RR42_RS16255 -5.7 -3.9 sulfate adenylyltransferase compare
RR42_RS04475 -5.5 -6.6 3-phosphoshikimate 1-carboxyvinyltransferase compare
RR42_RS19005 -5.4 -3.7 3-dehydroquinate synthase compare
RR42_RS14365 -5.3 -3.5 N-(5'-phosphoribosyl)anthranilate isomerase compare
RR42_RS16250 -5.2 -3.6 sulfate adenylyltransferase compare
RR42_RS06485 -5.1 -3.5 chorismate synthase compare
RR42_RS14390 -4.9 -3.4 3-isopropylmalate dehydratase compare
RR42_RS30655 -4.9 -4.7 LysR family transcriptional regulator compare
RR42_RS06095 -4.9 -4.1 hypothetical protein compare
RR42_RS18295 -4.8 -5.8 anthranilate synthase component I compare
RR42_RS26900 -4.7 -3.1 enoyl-CoA hydratase compare
RR42_RS30660 -4.6 -6.3 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase compare
RR42_RS14400 -4.5 -3.1 isopropylmalate isomerase compare
RR42_RS17645 -4.5 -4.4 shikimate dehydrogenase compare
RR42_RS19010 -4.5 -4.3 shikimate kinase compare
RR42_RS30640 -4.4 -5.2 DNA mismatch repair protein MutT compare
RR42_RS04535 -4.3 -3.0 cysteine synthase compare
RR42_RS02500 -4.3 -3.0 TetR family transcriptional regulator compare
RR42_RS05860 -4.3 -4.8 phospho-2-dehydro-3-deoxyheptonate aldolase compare
RR42_RS16270 -4.2 -6.4 sulfite reductase compare
RR42_RS04470 -4.2 -5.7 prephenate dehydrogenase compare
RR42_RS16275 -4.1 -2.8 membrane protein compare
RR42_RS18300 -4.1 -4.9 anthranilate synthase subunit II compare
RR42_RS01160 -4.0 -7.7 homoserine O-acetyltransferase compare
RR42_RS21220 -4.0 -2.7 iron transporter FeoB compare
RR42_RS11770 -3.9 -2.6 cyclase compare
RR42_RS33355 -3.9 -2.7 membrane protein compare
RR42_RS05990 -3.9 -6.4 aromatic amino acid aminotransferase compare
RR42_RS07555 -3.8 -2.6 potassium transporter Kup compare
RR42_RS16245 -3.8 -3.7 uroporphyrin-III methyltransferase compare
RR42_RS33260 -3.8 -5.2 multidrug MFS transporter compare
RR42_RS01290 -3.7 -6.1 thiamine biosynthesis protein ThiC compare
RR42_RS14320 -3.7 -5.0 O-succinylhomoserine sulfhydrylase compare
RR42_RS14385 -3.6 -4.9 3-isopropylmalate dehydrogenase compare
RR42_RS17355 -3.6 -1.5 hypothetical protein compare
RR42_RS15740 -3.5 -3.2 hypothetical protein compare
RR42_RS20195 -3.5 -1.4 ATPase F0F1 compare
RR42_RS19885 -3.4 -2.3 aminoglycoside transporter compare
RR42_RS18850 -3.4 -3.3 preprotein translocase subunit TatC compare
RR42_RS18855 -3.4 -2.3 preprotein translocase compare
RR42_RS08000 -3.3 -1.3 hypothetical protein compare
RR42_RS12590 -3.2 -1.3 50S ribosomal protein L9 compare
RR42_RS01380 -3.2 -3.3 membrane protein compare
RR42_RS04460 -3.1 -5.8 chorismate mutase compare
RR42_RS01845 -3.0 -1.7 glycerol-3-phosphate dehydrogenase compare
RR42_RS33235 -3.0 -7.4 GDP-mannose 4,6-dehydratase compare
RR42_RS33250 -2.9 -6.5 tyrosine protein kinase compare
RR42_RS07365 -2.9 -1.9 pyruvate dehydrogenase compare
RR42_RS02705 -2.8 -2.0 Holliday junction DNA helicase RuvA compare
RR42_RS08590 -2.8 -1.5 baseplate assembly protein compare
RR42_RS18310 -2.8 -1.9 indole-3-glycerol-phosphate synthase compare
RR42_RS33255 -2.8 -1.7 protein-tyrosine phosphatase compare
RR42_RS23110 -2.7 -1.5 isochorismatase compare
RR42_RS35875 -2.7 -8.1 UDP-galactose-4-epimerase compare
RR42_RS21505 -2.7 -1.5 hypothetical protein compare
RR42_RS33240 -2.6 -11.9 GDP-L-fucose synthase compare
RR42_RS14360 -2.6 -1.3 tryptophan synthase subunit alpha compare
RR42_RS33210 -2.6 -5.1 teichoic acid biosynthesis protein compare
RR42_RS17720 -2.6 -2.3 sugar kinase compare
RR42_RS01775 -2.5 -5.2 glutamate--cysteine ligase compare
RR42_RS11790 -2.5 -7.2 phosphoenolpyruvate synthase compare
RR42_RS06240 -2.4 -2.3 tryptophan--tRNA ligase compare
RR42_RS04765 -2.3 -2.6 3-oxoacyl-ACP reductase compare
RR42_RS28085 -2.3 -1.8 alkylphosphonate utilization protein PhnG compare
RR42_RS04895 -2.3 -7.5 serine/threonine protein phosphatase compare
RR42_RS25785 -2.2 -3.0 TetR family transcriptional regulator compare
RR42_RS15810 -2.2 -2.4 UDP-N-acetylglucosamine 4,6-dehydratase compare
RR42_RS27120 -2.2 -1.3 amino acid ABC transporter permease compare
RR42_RS12015 -2.2 -2.2 dihydrolipoamide acyltransferase compare
RR42_RS36450 -2.2 -1.2 acyl dehydratase compare
RR42_RS08185 -2.2 -2.3 hypothetical protein compare
RR42_RS33245 -2.1 -7.7 mannose-1-phosphate guanyltransferase compare
RR42_RS07605 -2.1 -5.6 poly-beta-hydroxybutyrate polymerase compare
RR42_RS04090 -2.1 -1.8 type II secretion system protein compare
RR42_RS06430 -2.1 -2.1 hypothetical protein compare
RR42_RS17555 -2.1 -1.1 hypothetical protein compare
RR42_RS01210 -2.0 -3.3 n-acetyl-gamma-glutamyl-phosphate reductase compare
RR42_RS20295 -2.0 -2.0 alpha/beta hydrolase compare
RR42_RS03875 -2.0 -1.9 nucleoside 2-deoxyribosyltransferase compare
RR42_RS13040 -2.0 -4.2 iron transporter compare
RR42_RS12040 -2.0 -7.3 MFS transporter compare
RR42_RS16240 -2.0 -1.0 cobalamin biosynthesis protein CbiX compare
RR42_RS32085 -2.0 -1.1 hypothetical protein compare
RR42_RS16260 -1.9 -0.9 phosphoadenosine phosphosulfate reductase compare
RR42_RS07380 -1.9 -2.9 dihydrolipoamide dehydrogenase compare
RR42_RS07180 -1.9 -2.8 hypothetical protein compare
RR42_RS00940 -1.9 -5.4 biotin synthase compare
RR42_RS02150 -1.9 -2.1 membrane protein compare
RR42_RS16360 -1.8 -1.4 transposase compare
RR42_RS33195 -1.8 -7.5 UDP-sugar lipid carrier transferase compare
RR42_RS00345 -1.8 -1.3 LysR family transcriptional regulator compare
RR42_RS06735 -1.8 -1.4 hypothetical protein compare
RR42_RS33575 -1.8 -2.0 hypothetical protein compare
RR42_RS12305 -1.8 -1.0 hypothetical protein compare
RR42_RS16310 -1.8 -1.7 hypothetical protein compare
RR42_RS19410 -1.8 -4.5 GntR family transcriptional regulator compare
RR42_RS29505 -1.8 -1.8 hypothetical protein compare
RR42_RS17060 -1.8 -9.7 histidine kinase compare
RR42_RS13595 -1.8 -2.4 hypothetical protein compare
RR42_RS18825 -1.8 -3.1 ubiquinol-cytochrome C reductase compare
RR42_RS15035 -1.7 -3.3 ZIP zinc transporter compare
RR42_RS17050 -1.7 -4.4 phosphoribosylglycinamide formyltransferase compare
RR42_RS28045 -1.7 -3.1 3-oxoacyl-ACP reductase compare
RR42_RS19695 -1.7 -2.3 cytochrome C protein compare
RR42_RS12510 -1.7 -2.9 hydrolase compare
RR42_RS22775 -1.7 -2.4 3-isopropylmalate dehydratase compare
RR42_RS27550 -1.6 -0.9 hypothetical protein compare
RR42_RS21820 -1.6 -2.2 GntR family transcriptional regulator compare
RR42_RS34940 -1.6 -2.1 bb3-type cytochrome oxidase subunit IV compare
RR42_RS23575 -1.6 -3.4 flagellar hook-basal body protein FliE compare
RR42_RS07565 -1.6 -5.5 transcription accessory protein compare
RR42_RS03005 -1.6 -1.5 3-hydroxy-2-methylbutyryl-CoA dehydrogenase compare
RR42_RS17055 -1.6 -4.2 LuxR family transcriptional regulator compare
RR42_RS31900 -1.6 -2.1 short-chain dehydrogenase compare
RR42_RS15640 -1.6 -1.1 hypothetical protein compare
RR42_RS21605 -1.6 -1.9 S-adenosylhomocysteine hydrolase compare
RR42_RS25160 -1.6 -3.8 hypothetical protein compare
RR42_RS13365 -1.6 -1.8 peptidase P60 compare
RR42_RS15000 -1.5 -1.8 GTP cyclohydrolase compare
RR42_RS11795 -1.5 -2.1 PEP synthetase regulatory protein compare
RR42_RS24985 -1.5 -2.5 hypothetical protein compare
RR42_RS33215 -1.5 -6.5 transferase compare
RR42_RS02045 -1.5 -6.9 GTPase compare
RR42_RS17320 -1.5 -1.9 murein hydrolase transporter LrgA compare
RR42_RS18985 -1.5 -5.0 glutamate synthase compare
RR42_RS10240 -1.5 -2.1 hypothetical protein compare
RR42_RS26985 -1.5 -2.0 hypothetical protein compare
RR42_RS15845 -1.5 -1.8 biotin transporter BioY compare
RR42_RS15455 -1.5 -4.4 membrane protein compare
RR42_RS35975 -1.5 -1.2 pilus assembly protein TadC compare
RR42_RS04770 -1.5 -1.0 methylglyoxal synthase compare
RR42_RS35685 -1.5 -3.2 flagellar rod assembly protein FlgJ compare
RR42_RS16900 -1.5 -5.0 N-formimino-L-glutamate deiminase compare
RR42_RS07295 -1.5 -2.3 LysR family transcriptional regulator compare
RR42_RS27160 -1.4 -1.8 acetyl-CoA acetyltransferase compare
RR42_RS01485 -1.4 -1.2 phosphonate transporter compare
RR42_RS21040 -1.4 -0.8 hypothetical protein compare
RR42_RS32600 -1.4 -1.8 cytochrome O ubiquinol oxidase subunit II compare
RR42_RS09595 -1.4 -2.8 histidine kinase compare
RR42_RS35110 -1.4 -1.4 hypothetical protein compare
RR42_RS16625 -1.4 -3.1 hypothetical protein compare
RR42_RS05920 -1.4 -2.3 HrcA family transcriptional regulator compare
RR42_RS19895 -1.4 -1.0 elongation factor GreAB compare
RR42_RS21300 -1.4 -2.1 GntR family transcriptional regulator compare
RR42_RS05930 -1.4 -2.0 RNA-binding protein S4 compare
RR42_RS27790 -1.4 -1.5 LuxR family transcriptional regulator compare
RR42_RS26475 -1.4 -1.8 Asp/Glu racemase compare
RR42_RS04205 -1.4 -1.6 glycine cleavage system regulatory protein compare
RR42_RS01435 -1.4 -1.7 short-chain dehydrogenase compare
RR42_RS01820 -1.4 -3.6 peptidase S41 compare
RR42_RS15090 -1.4 -2.1 DNA helicase compare
RR42_RS13625 -1.4 -1.9 4-hydroxybenzoyl-CoA reductase compare
RR42_RS01400 -1.4 -3.3 5-formyltetrahydrofolate cyclo-ligase compare
RR42_RS24510 -1.4 -1.1 hypothetical protein compare
RR42_RS08390 -1.4 -2.0 hypothetical protein compare
RR42_RS18990 -1.3 -9.4 glutamate synthase compare
RR42_RS26685 -1.3 -4.2 ferredoxin-NADP reductase compare
RR42_RS07440 -1.3 -2.4 hypothetical protein compare
RR42_RS00900 -1.3 -1.5 2-hydroxychromene-2-carboxylate isomerase compare
RR42_RS08025 -1.3 -1.0 phage Gp37Gp68 compare
RR42_RS08075 -1.3 -3.2 hypothetical protein compare
RR42_RS07920 -1.3 -1.3 cyclophilin-like superfamily protein compare
RR42_RS06820 -1.3 -3.2 hypothetical protein compare
RR42_RS03080 -1.3 -2.3 recombinase RecA compare
RR42_RS13705 -1.3 -1.4 alpha/beta hydrolase compare
RR42_RS21195 -1.3 -3.1 phosphohydrolase compare
RR42_RS01920 -1.3 -1.7 protoheme IX farnesyltransferase compare
RR42_RS15890 -1.3 -3.7 heme biosynthesis protein HemY compare
RR42_RS37410 -1.3 -2.5 PaaX family transcriptional regulator compare
RR42_RS27765 -1.3 -2.8 haloacid dehalogenase compare
RR42_RS01915 -1.3 -3.8 cytochrome C oxidase subunit I compare
RR42_RS25755 -1.3 -1.9 IclR family transcriptional regulator compare
RR42_RS06545 -1.3 -1.1 thioesterase compare
RR42_RS20300 -1.3 -2.3 MerR family transcriptional regulator compare
RR42_RS01315 -1.2 -1.1 GNAT family acetyltransferase compare
RR42_RS27185 -1.2 -3.9 sodium:proton antiporter compare
RR42_RS09180 -1.2 -0.8 Rrf2 family transcriptional regulator compare
RR42_RS08450 -1.2 -1.0 hypothetical protein compare
RR42_RS30250 -1.2 -2.3 peptide ABC transporter compare
RR42_RS05945 -1.2 -1.3 thioredoxin compare
RR42_RS08080 -1.2 -3.5 cell division protein FtsK compare
RR42_RS13055 -1.2 -2.7 NAD-dependent protein deacylase compare
RR42_RS21745 -1.2 -2.2 hypothetical protein compare
RR42_RS27065 -1.2 -1.1 hypothetical protein compare
RR42_RS31055 -1.2 -1.5 3-hydroxybutyryl-CoA dehydrogenase compare
RR42_RS02810 -1.2 -1.4 acyl-phosphate glycerol 3-phosphate acyltransferase compare
RR42_RS22590 -1.2 -0.8 organic hydroperoxide resistance protein compare
RR42_RS04700 -1.2 -0.9 ribonuclease G compare
RR42_RS19760 -1.2 -3.0 hypothetical protein compare
RR42_RS26045 -1.2 -3.2 amino acid ABC transporter substrate-binding protein compare
RR42_RS13420 -1.2 -2.6 phosphohistidine phosphatase compare
RR42_RS00385 -1.2 -1.5 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase compare
RR42_RS28195 -1.2 -2.1 SAM-dependent methyltransferase compare
RR42_RS01255 -1.2 -3.0 lauroyl acyltransferase compare
RR42_RS18120 -1.2 -1.2 cell division protein MraZ compare
RR42_RS36050 -1.2 -2.2 hypothetical protein compare


Specific Phenotypes

For 2 genes in this experiment

For nitrogen source L-Glutamine in Cupriavidus basilensis FW507-4G11

For nitrogen source L-Glutamine across organisms