Experiment set3IT011 for Pseudomonas fluorescens FW300-N1B4

Compare to:

LB with Doxycycline hyclate 0.0001 mg/ml

Genes with specific phenotypes:

  gene name fitness t score description  
Pf1N1B4_389 -3.3 -5.0 Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1) compare
Pf1N1B4_3667 -3.3 -7.9 Nucleoside ABC transporter, periplasmic nucleoside-binding protein conserved
Pf1N1B4_3668 -2.8 -7.3 Nucleoside ABC transporter, periplasmic nucleoside-binding protein conserved
Pf1N1B4_1142 -2.1 -8.4 Uncharacterized iron-regulated membrane protein; Iron-uptake factor PiuB compare
Pf1N1B4_723 -2.0 -8.7 two-component system sensor protein conserved
Pf1N1B4_3566 -1.9 -6.7 Phenylalanine-4-hydroxylase (EC 1.14.16.1) compare
Pf1N1B4_3147 -1.9 -7.5 Putative NADPH-quinone reductase (modulator of drug activity B) compare
Pf1N1B4_1296 -1.7 -9.1 Biosynthetic arginine decarboxylase (EC 4.1.1.19) (from data) compare
Pf1N1B4_1509 -1.1 -5.3 Putative histidine ammonia-lyase protein compare
Pf1N1B4_3846 +1.0 5.5 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) compare
Pf1N1B4_546 +1.2 6.4 FMN-dependent NADH-azoreductase compare
Pf1N1B4_149 +1.2 5.1 Pyoverdine sidechain non-ribosomal peptide synthetase PvdD compare
Pf1N1B4_1669 +1.2 5.8 ADP compounds hydrolase NudE (EC 3.6.1.-) compare
Pf1N1B4_5355 +1.4 6.0 hypothetical protein compare
Pf1N1B4_366 +1.4 9.7 FIG00954136: hypothetical protein compare
Pf1N1B4_1096 +1.5 6.4 Septum formation protein Maf compare
Pf1N1B4_573 +1.7 11.8 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) compare
Pf1N1B4_1181 +1.7 7.2 UPF0125 protein yfjF conserved
Pf1N1B4_5948 +2.1 10.4 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) compare
Pf1N1B4_3916 +2.1 12.8 Transcription-repair coupling factor compare
Pf1N1B4_3415 +2.4 6.1 Transcriptional regulator, TetR family compare
Pf1N1B4_2206 +2.5 11.3 FIG139438: lipoprotein B compare
Pf1N1B4_3264 +6.0 13.9 Methyltransferase (EC 2.1.1.-) conserved


Specific phenotypes for stress Doxycycline hyclate across organisms