Experiment set3IT011 for Pseudomonas syringae pv. syringae B728a

Compare to:

KB with Benzalkonium Chloride 6.25 ug/ml

200 most important genes:

  gene name fitness t score description  
Psyr_1544 -3.9 -6.2 SirA-like protein compare
Psyr_4203 -3.5 -3.0 SsrA-binding protein compare
Psyr_4740 -3.5 -7.6 thiazole-phosphate synthase compare
Psyr_0014 -3.4 -4.5 lipid A biosynthesis acyltransferase compare
Psyr_3698 -3.2 -6.4 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal:Hpt compare
Psyr_1613 -3.1 -5.3 septum site-determining protein MinC compare
Psyr_0215 -3.1 -11.1 Exodeoxyribonuclease III xth compare
Psyr_1373 -3.0 -3.5 Peptidoglycan-binding LysM:Peptidase M23B compare
Psyr_0917 -2.9 -12.1 ABC-2 compare
Psyr_4009 -2.9 -8.8 RND efflux system, outer membrane lipoprotein, NodT compare
Psyr_4007 -2.8 -10.8 Secretion protein HlyD compare
Psyr_2897 -2.8 -7.2 regulatory protein, LuxR:Response regulator receiver compare
Psyr_0918 -2.5 -11.3 ABC transporter compare
Psyr_2285 -2.5 -3.1 Twin-arginine translocation pathway signal compare
Psyr_1614 -2.5 -3.5 lipid A biosynthesis acyltransferase compare
Psyr_2112 -2.5 -3.4 Protein with unknown function DUF469 compare
Psyr_4683 -2.4 -4.5 dethiobiotin synthase compare
Psyr_4008 -2.4 -13.7 Hydrophobe/amphiphile efflux-1 HAE1 compare
Psyr_4991 -2.3 -2.6 hypothetical protein compare
Psyr_4140 -2.3 -3.7 Protein of unknown function DUF140 compare
Psyr_3691 -2.3 -7.4 conserved hypothetical protein compare
Psyr_1930 -2.2 -4.2 hypothetical protein compare
Psyr_0464 -2.2 -2.7 hypothetical protein compare
Psyr_3854 -2.2 -1.3 OmpA/MotB compare
Psyr_1247 -2.2 -2.6 conserved hypothetical protein compare
Psyr_2347 -2.1 -3.5 hypothetical protein compare
Psyr_0951 -2.1 -2.6 UBA/THIF-type NAD/FAD binding fold:MoeZ/MoeB compare
Psyr_1762 -1.9 -7.8 conserved hypothetical protein compare
Psyr_0454 -1.9 -5.1 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme compare
Psyr_0394 -1.9 -3.2 Heat shock protein HslU compare
Psyr_4340 -1.8 -6.2 phosphomethylpyrimidine kinase, putative compare
Psyr_1719 -1.8 -3.0 conserved hypothetical protein compare
Psyr_2071 -1.8 -2.7 outer membrane lipoprotein OprI compare
Psyr_0982 -1.8 -1.9 conserved hypothetical protein compare
Psyr_5132 -1.8 -3.5 Glucose-inhibited division protein A subfamily compare
Psyr_1747 -1.7 -3.4 ATP-dependent Clp protease proteolytic subunit ClpP compare
Psyr_3954 -1.7 -3.5 GTP-binding protein LepA compare
Psyr_0426 -1.7 -1.5 lipoprotein, putative compare
Psyr_0228 -1.6 -3.2 Major facilitator superfamily compare
Psyr_4316 -1.6 -2.4 conserved hypothetical protein compare
Psyr_4087 -1.6 -1.7 Protein of unknown function DUF520 compare
Psyr_4144 -1.6 -1.4 Protein of unknown function DUF1239 compare
Psyr_4158 -1.6 -5.7 conserved hypothetical protein compare
Psyr_3034 -1.6 -1.5 conserved hypothetical protein compare
Psyr_3755 -1.6 -2.1 conserved hypothetical protein compare
Psyr_0535 -1.5 -1.8 toluene tolerance protein, putative compare
Psyr_2211 -1.5 -1.9 monooxygenase, NtaA/SnaA/SoxA family compare
Psyr_1910 -1.5 -3.7 VacJ-like lipoprotein compare
Psyr_0849 -1.5 -4.3 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
Psyr_1751 -1.5 -3.9 PpiC-type peptidyl-prolyl cis-trans isomerase compare
Psyr_1277 -1.5 -1.0 formate-dependent phosphoribosylglycinamide formyltransferase compare
Psyr_3837 -1.5 -1.6 conserved hypothetical protein compare
Psyr_2383 -1.5 -2.3 Protein of unknown function DUF72 compare
Psyr_2196 -1.5 -1.8 Urease accessory protein UreG compare
Psyr_4819 -1.5 -6.4 conserved hypothetical protein conserved
Psyr_4442 -1.4 -4.8 membrane protein, putative compare
Psyr_1543 -1.4 -6.9 Peptidase M48, Ste24p compare
Psyr_3806 -1.4 -2.3 hypothetical protein compare
Psyr_1733 -1.4 -2.0 Peptidyl-prolyl cis-trans isomerase, cyclophilin type compare
Psyr_1108 -1.4 -5.1 glyceraldehyde-3-phosphate dehydrogenase compare
Psyr_4141 -1.4 -4.0 ABC transporter compare
Psyr_0475 -1.4 -2.0 Protein of unknown function YGGT compare
Psyr_1350 -1.4 -2.9 site-2 protease, Metallo peptidase, MEROPS family M50B compare
Psyr_3667 -1.3 -1.7 conserved hypothetical protein compare
Psyr_4684 -1.3 -1.2 biotin synthesis protein BioC compare
Psyr_5135 -1.3 -1.1 Protein of unknown function DUF37 compare
Psyr_3633 -1.3 -4.3 threonine/serine transporter compare
Psyr_1236 -1.3 -2.3 transcriptional regulator, BadM/Rrf2 family compare
Psyr_3581 -1.3 -3.5 ribosomal large subunit pseudouridine synthase B compare
Psyr_4687 -1.3 -4.9 biotin synthase compare
Psyr_1935 -1.3 -2.6 Protein of unknown function DUF796 compare
Psyr_0736 -1.3 -2.3 umuC protein compare
Psyr_5029 -1.3 -1.2 Rubredoxin-type Fe(Cys)4 protein compare
Psyr_3840 -1.3 -2.5 conserved hypothetical protein compare
Psyr_4341 -1.3 -3.4 thiamine-phosphate diphosphorylase compare
Psyr_3751 -1.3 -3.3 Carbon storage regulator compare
Psyr_3905 -1.3 -4.1 glycerol kinase compare
Psyr_1097 -1.3 -1.4 glycine cleavage system H protein compare
Psyr_2327 -1.3 -2.1 GTP cyclohydrolase subunit MoaA compare
Psyr_0531 -1.3 -1.2 LmbE-like protein compare
Psyr_4884 -1.3 -3.0 Rhodanese-like protein compare
Psyr_3164 -1.3 -4.3 Protein of unknown function UPF0005 compare
Psyr_0444 -1.3 -1.0 Malonate decarboxylase delta subunit compare
Psyr_0383 -1.3 -1.4 Twin-arginine translocation protein TatB compare
Psyr_4138 -1.2 -2.8 Toluene tolerance compare
Psyr_3237 -1.2 -3.6 3-oxoacid CoA-transferase compare
Psyr_3518 -1.2 -3.4 hypothetical protein compare
Psyr_3298 -1.2 -2.8 conserved hypothetical protein compare
Psyr_4686 -1.2 -2.9 8-amino-7-oxononanoate synthase compare
Psyr_3296 -1.2 -2.3 MOSC:MOSC, N-terminal beta barrel compare
Psyr_2943 -1.2 -3.2 amino acid ABC transporter membrane protein 2, PAAT family compare
Psyr_3179 -1.2 -2.0 DNA translocase FtsK compare
Psyr_5133 -1.2 -2.8 tRNA modification GTPase trmE compare
Psyr_3193 -1.2 -1.9 Transcription factor jumonji, jmjC compare
Psyr_3040 -1.2 -1.4 conserved hypothetical protein compare
Psyr_2769 -1.2 -2.2 conserved hypothetical protein compare
Psyr_2209 -1.2 -1.3 ABC transporter, substrate-binding protein, aliphatic sulfonate compare
Psyr_4019 -1.2 -2.6 H-NS family protein MvaT compare
Psyr_3110 -1.2 -1.7 Nucleoside 2-deoxyribosyltransferase compare
Psyr_4159 -1.2 -4.2 RNAse G compare
Psyr_3958 -1.2 -5.6 RNA polymerase, sigma-24 subunit, RpoE compare
Psyr_0153 -1.2 -2.7 conserved hypothetical protein compare
Psyr_1121 -1.2 -1.7 6-phosphogluconolactonase compare
Psyr_4860 -1.2 -1.0 Integrase, catalytic region compare
Psyr_3681 -1.2 -1.2 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
Psyr_0259 -1.2 -1.7 Osmolarity sensor protein envZ compare
Psyr_0487 -1.1 -1.9 glutathione synthase compare
Psyr_4967 -1.1 -3.7 conserved hypothetical protein compare
Psyr_3624 -1.1 -2.9 transcriptional regulator, LysR family compare
Psyr_4380 -1.1 -2.0 translation initiation factor 1 (eIF-1/SUI1) compare
Psyr_2642 -1.1 -3.1 hypothetical protein compare
Psyr_2641 -1.1 -1.9 hypothetical protein compare
Psyr_3088 -1.1 -3.4 Glycosyl transferase, group 1 compare
Psyr_1650 -1.1 -2.3 aminodeoxychorismate lyase apoprotein compare
Psyr_2227 -1.1 -1.1 conserved hypothetical protein compare
Psyr_0579 -1.1 -5.1 RNAse R compare
Psyr_5036 -1.1 -1.6 Response regulator receiver compare
Psyr_3808 -1.1 -0.8 hypothetical protein compare
Psyr_2779 -1.1 -1.5 Phage minor tail compare
Psyr_4566 -1.1 -5.0 Peptidase M23B compare
Psyr_3857 -1.1 -1.5 conserved hypothetical protein compare
Psyr_0491 -1.1 -3.1 chemotaxis sensory transducer compare
Psyr_2645 -1.1 -3.8 hypothetical protein compare
Psyr_3673 -1.1 -1.0 Phosphoglycerate/bisphosphoglycerate mutase compare
Psyr_0319 -1.1 -3.7 conserved hypothetical protein compare
Psyr_3807 -1.1 -3.6 hypothetical protein compare
Psyr_2221 -1.1 -1.2 sarcosine oxidase, gamma subunit compare
Psyr_3008 -1.1 -2.8 Undecaprenyl-diphosphatase compare
Psyr_3665 -1.1 -2.6 conserved hypothetical protein compare
Psyr_4843 -1.1 -2.7 NUDIX hydrolase compare
Psyr_4512 -1.1 -4.6 putative phage-related protein compare
Psyr_3213 -1.1 -1.7 Propeptide, PepSY amd peptidase M4 compare
Psyr_2784 -1.1 -2.9 phage-related conserved hypothetical protein compare
Psyr_3545 -1.1 -2.6 Short-chain dehydrogenase/reductase SDR compare
Psyr_0857 -1.1 -1.5 [SSU ribosomal protein S18P]-alanine acetyltransferase compare
Psyr_1638 -1.1 -1.5 RNAse E compare
Psyr_3926 -1.1 -1.8 transcriptional regulator, PadR family compare
Psyr_3591 -1.1 -2.1 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal compare
Psyr_3459 -1.1 -1.9 Helix-turn-helix, Fis-type compare
Psyr_4971 -1.1 -4.5 Sel1-like repeat protein compare
Psyr_4627 -1.1 -1.4 dimethyladenosine transferase compare
Psyr_4254 -1.0 -1.5 conserved hypothetical protein compare
Psyr_3611 -1.0 -1.5 Protein of unknown function DUF815 compare
Psyr_2695 -1.0 -1.6 conserved hypothetical protein compare
Psyr_3728 -1.0 -3.2 hypothetical protein compare
Psyr_2345 -1.0 -2.6 ea59 protein compare
Psyr_2095 -1.0 -2.8 Conserved TM helix compare
Psyr_3616 -1.0 -3.5 Heat shock protein, Metallo peptidase, MEROPS family M48B compare
Psyr_1268 -1.0 -3.5 extracellular solute-binding protein, family 3:SLT compare
Psyr_0575 -1.0 -1.3 protease FtsH subunit HflC compare
Psyr_3435 -1.0 -1.9 chemotaxis phosphatase, CheZ compare
Psyr_0312 -1.0 -2.9 hypothetical protein compare
Psyr_2854 -1.0 -2.4 conserved hypothetical protein compare
Psyr_4581 -1.0 -1.7 anthranilate synthase, component II compare
Psyr_4116 -1.0 -1.1 Transport-associated protein compare
Psyr_4996 -1.0 -3.4 hypothetical protein compare
Psyr_4831 -1.0 -2.1 ABC transporter compare
Psyr_2387 -1.0 -1.7 Malate:quinone-oxidoreductase compare
Psyr_3955 -1.0 -3.0 Peptidase S1, chymotrypsin:PDZ/DHR/GLGF compare
Psyr_3476 -1.0 -1.8 Flagellar basal body rod protein:Protein of unknown function DUF1078 compare
Psyr_0574 -1.0 -1.9 protease FtsH subunit HflK compare
Psyr_2507 -1.0 -1.0 Endoribonuclease L-PSP compare
Psyr_0635 -1.0 -1.3 MaoC-like dehydratase compare
Psyr_4943 -1.0 -4.7 Peptidoglycan-binding LysM:Transport-associated compare
Psyr_1581 -1.0 -2.1 conserved hypothetical protein compare
Psyr_2520 -1.0 -0.6 SOS-response transcriptional repressor, LexA compare
Psyr_0774 -1.0 -2.6 monosaccharide ABC transporter membrane protein, CUT2 family compare
Psyr_2089 -1.0 -3.9 Protein of unknown function DUF299 compare
Psyr_1846 -1.0 -2.7 hypothetical protein compare
Psyr_2393 -1.0 -2.4 Flavin reductase-like protein compare
Psyr_2635 -1.0 -2.7 conserved hypothetical protein compare
Psyr_1554 -0.9 -1.6 hypothetical protein compare
Psyr_0792 -0.9 -2.3 conserved hypothetical protein compare
Psyr_2906 -0.9 -1.5 Pilus retraction protein PilT compare
Psyr_0268 -0.9 -1.2 DSBA oxidoreductase compare
Psyr_4112 -0.9 -4.1 Protein of unknown function UPF0011 compare
Psyr_3529 -0.9 -1.6 Asp/Glu racemase compare
Psyr_4224 -0.9 -1.3 conserved hypothetical protein compare
Psyr_4362 -0.9 -1.2 Rare lipoprotein A compare
Psyr_2669 -0.9 -1.6 Aminoglycoside phosphotransferase compare
Psyr_1225 -0.9 -2.3 hypothetical protein compare
Psyr_3341 -0.9 -2.3 hypothetical protein compare
Psyr_1040 -0.9 -2.4 RNA polymerase sigma factor, ECF subfamily compare
Psyr_3343 -0.9 -3.2 GCN5-related N-acetyltransferase compare
Psyr_3281 -0.9 -1.5 Glycoside hydrolase, family 3, N-terminal compare
Psyr_2791 -0.9 -2.2 hypothetical protein compare
Psyr_2990 -0.9 -2.0 conserved hypothetical protein compare
Psyr_2868 -0.9 -1.7 Response regulator receiver:Transcriptional regulatory protein, C-terminal compare
Psyr_3107 -0.9 -1.7 conserved hypothetical protein compare
Psyr_4752 -0.9 -2.9 Insulinase-like:Peptidase M16, C-terminal compare
Psyr_3693 -0.9 -2.0 conserved hypothetical protein compare
Psyr_2804 -0.9 -1.2 hypothetical protein compare
Psyr_1801 -0.9 -1.5 1-aminocyclopropane-1-carboxylate deaminase compare
Psyr_4381 -0.9 -5.0 arginine decarboxylase compare
Psyr_1806 -0.9 -1.4 Ureidoglycolate hydrolase compare
Psyr_2114 -0.9 -2.0 two component transcriptional regulator, LuxR family compare
Psyr_0202 -0.9 -4.0 transcriptional regulator, LysR family compare
Psyr_1094 -0.9 -1.2 cold-shock DNA-binding protein family compare
Psyr_0835 -0.9 -2.1 transcriptional regulator, TraR/DksA family compare
Psyr_2855 -0.9 -1.8 methionine synthase (B12-independent) compare


Specific Phenotypes

For 2 genes in this experiment

For stress Benzalkonium Chloride in Pseudomonas syringae pv. syringae B728a

For stress Benzalkonium Chloride across organisms