Experiment set3IT011 for Methanococcus maripaludis S2

Compare to:

H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE

200 most important genes:

  gene name fitness t score description  
MMP_RS07845 -9.2 -2.7 LL-diaminopimelate aminotransferase compare
MMP_RS01175 -8.8 -3.6 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS06625 -6.9 -2.3 DNA primase compare
MMP_RS08100 -6.8 -6.5 8-amino-7-oxononanoate synthase compare
MMP_RS04500 -6.8 -18.0 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
MMP_RS06120 -6.8 -2.2 UPF0147 family protein compare
MMP_RS01325 -6.7 -2.3 dihydroneopterin aldolase family protein compare
MMP_RS06285 -6.7 -2.2 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS00520 -6.6 -1.9 RNA polymerase Rpb4 family protein compare
MMP_RS07390 -6.6 -2.7 cell division protein FtsZ compare
MMP_RS02195 -6.6 -3.9 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS06895 -6.6 -1.9 selenocysteine-specific translation elongation factor compare
MMP_RS00110 -6.5 -2.6 hypothetical protein compare
MMP_RS06370 -6.5 -4.1 biotin synthase BioB compare
MMP_RS00895 -6.4 -4.3 hypothetical protein compare
MMP_RS01795 -6.3 -1.8 methanogenesis marker 6 protein compare
MMP_RS06925 -6.3 -2.3 ribonuclease VapC4 compare
MMP_RS08790 -6.2 -2.0 translation initiation factor IF-2 subunit alpha compare
MMP_RS03445 -6.0 -1.0 methanogenesis marker 17 protein compare
MMP_RS07750 -6.0 -5.1 DUF357 domain-containing protein compare
MMP_RS06400 -6.0 -1.7 4Fe-4S binding protein compare
MMP_RS07195 -6.0 -8.5 M20 family metallo-hydrolase compare
MMP_RS01225 -6.0 -6.2 DUF5379 domain-containing protein compare
MMP_RS03600 -5.9 -2.2 triose-phosphate isomerase compare
MMP_RS01020 -5.9 -1.0 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS08820 -5.9 -6.0 hypothetical protein compare
MMP_RS07380 -5.8 -2.2 transcription elongation factor Spt5 compare
MMP_RS06730 -5.8 -1.9 phosphopantothenate/pantothenate synthetase compare
MMP_RS07600 -5.8 -2.6 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS03400 -5.7 -2.9 archease compare
MMP_RS02240 -5.7 -3.8 methanogenesis marker 7 protein compare
MMP_RS07605 -5.7 -3.7 diadenylate cyclase compare
MMP_RS05515 -5.7 -6.4 cyclic pyranopterin monophosphate synthase MoaC compare
MMP_RS08435 -5.6 -2.5 Era-like GTP-binding protein compare
MMP_RS04775 -5.6 -2.8 adenosylhomocysteinase compare
MMP_RS01220 -5.6 -8.7 hypothetical protein compare
MMP_RS03035 -5.6 -3.4 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS05845 -5.5 -1.8 tRNA-intron lyase compare
MMP_RS06295 -5.5 -8.7 methanogenesis marker 14 protein compare
MMP_RS08650 -5.5 -2.8 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMP_RS03700 -5.5 -11.7 sodium:proton antiporter compare
MMP_RS01725 -5.4 -4.5 class I SAM-dependent methyltransferase family protein compare
MMP_RS01610 -5.3 -3.5 hypothetical protein compare
MMP_RS02190 -5.3 -3.3 sulfopyruvate decarboxylase subunit alpha compare
MMP_RS07645 -5.2 -5.1 aldehyde dehydrogenase family protein compare
MMP_RS08460 -5.2 -2.1 proteasome-activating nucleotidase compare
MMP_RS01005 -5.2 -1.2 riboflavin synthase compare
MMP_RS03025 -5.2 -6.3 molybdenum cofactor guanylyltransferase compare
MMP_RS08210 -5.2 -2.4 phosphatidylglycerophosphatase A compare
MMP_RS08095 -5.2 -7.4 dethiobiotin synthase compare
MMP_RS00300 -5.1 -0.9 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS01755 -5.0 -1.2 DUF2097 domain-containing protein compare
MMP_RS03435 -5.0 -2.2 ketol-acid reductoisomerase compare
MMP_RS02135 -5.0 -6.0 DUF5612 domain-containing protein compare
MMP_RS08440 -5.0 -3.7 cell division protein SepF compare
MMP_RS06355 -4.9 -2.6 molybdenum cofactor biosynthesis protein MoaE compare
MMP_RS03015 -4.9 -10.4 GTP 3' 8-cyclase MoaA compare
MMP_RS02010 -4.9 -9.7 PHP domain-containing protein compare
MMP_RS02875 -4.9 -11.9 chorismate pyruvate-lyase family protein compare
MMP_RS05930 -4.8 -2.9 3-isopropylmalate dehydratase large subunit compare
MMP_RS07730 -4.8 -1.8 pyruvate synthase subunit beta compare
MMP_RS07755 -4.8 -1.1 DUF555 domain-containing protein compare
MMP_RS01910 -4.8 -11.1 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
MMP_RS08105 -4.8 -6.6 6-carboxyhexanoate--CoA ligase compare
MMP_RS02345 -4.8 -3.7 GTP-dependent dephospho-CoA kinase family protein compare
MMP_RS01500 -4.8 -2.5 CBS domain-containing protein compare
MMP_RS04685 -4.7 -3.4 DUF126 domain-containing protein compare
MMP_RS06885 -4.7 -3.1 50S ribosome-binding GTPase compare
MMP_RS05555 -4.7 -1.1 DUF4040 domain-containing protein compare
MMP_RS08715 -4.7 -2.1 formylmethanofuran dehydrogenase subunit B compare
MMP_RS09020 -4.6 -2.2 hypothetical protein compare
MMP_RS01385 -4.6 -0.8 imidazole glycerol phosphate synthase subunit HisH compare
MMP_RS03960 -4.6 -1.1 hypothetical protein compare
MMP_RS07200 -4.6 -7.5 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS03475 -4.6 -0.8 hypothetical protein compare
MMP_RS07555 -4.5 -0.8 monovalent cation/H+ antiporter subunit E compare
MMP_RS07005 -4.5 -0.7 4Fe-4S binding protein compare
MMP_RS06475 -4.5 -5.8 FAD-dependent oxidoreductase compare
MMP_RS06020 -4.5 -4.9 archaeoflavoprotein AfpA compare
MMP_RS02900 -4.4 -0.7 imidazoleglycerol-phosphate dehydratase HisB compare
MMP_RS00115 -4.4 -12.4 radical SAM protein compare
MMP_RS07635 -4.4 -7.9 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS04780 -4.4 -2.9 ribonuclease P compare
MMP_RS00515 -4.4 -1.0 DUF655 domain-containing protein compare
MMP_RS08300 -4.4 -1.3 metal-sulfur cluster assembly factor compare
MMP_RS08635 -4.4 -1.8 UbiA family prenyltransferase compare
MMP_RS01955 -4.4 -2.6 hypothetical protein compare
MMP_RS05815 -4.4 -3.9 NOL1/NOP2/sun family putative RNA methylase compare
MMP_RS00040 -4.4 -5.2 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMP_RS05640 -4.3 -9.2 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMP_RS08745 -4.3 -7.6 CDP-2 3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMP_RS00305 -4.3 -2.6 phosphoribosyl-ATP diphosphatase compare
MMP_RS02355 -4.2 -3.2 30S ribosomal protein S27ae compare
MMP_RS06230 -4.2 -2.8 helix-turn-helix domain-containing protein compare
MMP_RS06270 -4.2 -6.8 TIGR00300 family protein compare
MMP_RS01905 -4.1 -12.5 glycosyltransferase compare
MMP_RS01915 -4.1 -15.0 DUF354 domain-containing protein compare
MMP_RS01830 -4.1 -1.3 tRNA-Val compare
MMP_RS07580 -4.1 -3.5 DUF356 domain-containing protein compare
MMP_RS06350 -4.1 -6.8 HesA/MoeB/ThiF family protein compare
MMP_RS06980 -4.1 -7.7 tRNA 2-thiocytidine biosynthesis TtcA family protein compare
MMP_RS05250 -4.1 -2.2 NFYB/HAP3 family transcription factor subunit compare
MMP_RS04710 -4.1 -2.0 hypothetical protein compare
MMP_RS01800 -4.0 -4.4 TIGR00303 family protein compare
MMP_RS01700 -4.0 -0.9 dihydroxy-acid dehydratase compare
MMP_RS06670 -4.0 -5.3 glucose-6-phosphate isomerase compare
MMP_RS00685 -3.9 -4.7 2-phospho-L-lactate guanylyltransferase compare
MMP_RS05265 -3.9 -2.6 2-isopropylmalate synthase compare
MMP_RS08720 -3.7 -1.7 4Fe-4S binding protein compare
MMP_RS05345 -3.7 -9.4 hypothetical protein compare
MMP_RS04720 -3.7 -3.6 DedA family protein compare
MMP_RS03640 -3.7 -3.7 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS01925 -3.7 -9.8 DUF1616 domain-containing protein compare
MMP_RS01920 -3.7 -10.5 glycosyltransferase family 2 protein compare
MMP_RS02280 -3.7 -0.9 DUF211 domain-containing protein compare
MMP_RS00810 -3.7 -9.7 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS06900 -3.7 -2.6 coenzyme F420-reducing hydrogenase FrhD protein compare
MMP_RS00050 -3.6 -7.9 AarF/UbiB family protein compare
MMP_RS07545 -3.6 -0.8 HTH domain-containing protein compare
MMP_RS00325 -3.6 -1.8 RNA-binding protein compare
MMP_RS03580 -3.6 -3.3 signal recognition particle-docking protein FtsY compare
MMP_RS03315 -3.5 -1.7 ferrous iron transport protein A compare
MMP_RS01900 -3.5 -18.0 hypothetical protein compare
MMP_RS02145 -3.5 -4.1 winged helix-turn-helix transcriptional regulator compare
MMP_RS04890 -3.5 -0.8 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS02800 -3.4 -7.5 nucleotidyltransferase domain-containing protein compare
MMP_RS07075 -3.4 -3.9 phosphomannomutase/phosphoglucomutase compare
MMP_RS08445 -3.4 -4.6 DUF2099 family protein compare
MMP_RS06340 -3.4 -6.8 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS07355 -3.3 -0.9 transcription factor S compare
MMP_RS01895 -3.3 -8.2 flippase compare
MMP_RS05525 -3.3 -8.0 calcium/sodium antiporter compare
MMP_RS05425 -3.2 -4.8 monovalent cation/H+ antiporter complex subunit F compare
MMP_RS01940 -3.2 -4.2 MoxR family ATPase compare
MMP_RS03140 -3.2 -13.9 hypothetical protein compare
MMP_RS06315 -3.2 -1.0 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMP_RS03145 -3.1 -8.7 fibrillarin-like rRNA/tRNA 2'-O-methyltransferase compare
MMP_RS06395 -3.1 -3.4 ThiF family adenylyltransferase compare
MMP_RS07695 -3.1 -8.4 DUF3236 domain-containing protein compare
MMP_RS07435 -3.1 -1.9 GMP synthase subunit A compare
MMP_RS02245 -3.0 -4.5 hypothetical protein compare
MMP_RS07540 -3.0 -4.1 CBS domain-containing protein compare
MMP_RS05875 -3.0 -6.3 hydroxyethylthiazole kinase compare
MMP_RS00695 -3.0 -1.0 biotin--[acetyl-CoA-carboxylase] ligase compare
MMP_RS01885 -3.0 -7.2 Gfo/Idh/MocA family oxidoreductase compare
MMP_RS01365 -3.0 -3.5 archaeal proteasome endopeptidase complex subunit alpha compare
MMP_RS07735 -2.9 -0.7 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha compare
MMP_RS06105 -2.9 -11.1 hydrogenase maturation peptidase HycI compare
MMP_RS03095 -2.9 -7.3 diphthine synthase compare
MMP_RS00315 -2.9 -8.6 Nif3-like dinuclear metal center hexameric protein compare
MMP_RS04850 -2.9 -16.4 UPF0254 family protein compare
MMP_RS06130 -2.9 -4.2 peptidylprolyl isomerase compare
MMP_RS00320 -2.9 -2.1 class I SAM-dependent methyltransferase compare
MMP_RS01970 -2.9 -6.7 TIGR04279 domain-containing protein compare
MMP_RS06110 -2.8 -2.6 ATP-dependent protease LonB compare
MMP_RS01890 -2.8 -3.1 nucleotide sugar dehydrogenase compare
MMP_RS02340 -2.8 -2.3 DNA-directed RNA polymerase subunit E'' compare
MMP_RS07875 -2.8 -6.0 hypothetical protein compare
MMP_RS06310 -2.8 -2.8 NAD(P)/FAD-dependent oxidoreductase compare
MMP_RS02175 -2.8 -0.8 DUF1611 domain-containing protein compare
MMP_RS03155 -2.8 -7.4 precorrin-6A reductase compare
MMP_RS01880 -2.8 -6.8 DegT/DnrJ/EryC1/StrS family aminotransferase compare
MMP_RS01875 -2.8 -9.2 N-acetyltransferase compare
MMP_RS07425 -2.7 -7.5 GTP-binding protein compare
MMP_RS01930 -2.7 -10.7 hypothetical protein compare
MMP_RS00985 -2.7 -4.5 CDC48 family AAA ATPase compare
MMP_RS04585 -2.7 -9.6 AIR synthase related protein compare
MMP_RS00735 -2.7 -3.5 5 10-methenyltetrahydromethanopterin hydrogenase compare
MMP_RS06630 -2.6 -1.2 UPF0058 family protein compare
MMP_RS01545 -2.6 -1.2 CBS domain-containing protein compare
MMP_RS01380 -2.6 -3.1 PHP domain-containing protein compare
MMP_RS07090 -2.6 -11.4 tRNA (adenine-N1)-methyltransferase compare
MMP_RS03205 -2.6 -1.5 peptidyl-tRNA hydrolase Pth2 compare
MMP_RS04955 -2.6 -6.2 DNA topoisomerase I compare
MMP_RS06215 -2.6 -2.8 30S ribosomal protein S6e compare
MMP_RS05920 -2.6 -0.7 50S ribosomal protein L37e compare
MMP_RS01945 -2.6 -4.8 DUF4350 domain-containing protein compare
MMP_RS01935 -2.6 -6.3 DUF58 domain-containing protein compare
MMP_RS01335 -2.6 -2.6 prefoldin subunit beta compare
MMP_RS00725 -2.5 -6.5 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMP_RS01840 -2.5 -9.9 TIGR00289 family protein compare
MMP_RS05925 -2.4 -4.7 small nuclear ribonucleoprotein compare
MMP_RS01415 -2.3 -4.4 DUF2067 domain-containing protein compare
MMP_RS07700 -2.3 -12.7 DUF1188 domain-containing protein compare
MMP_RS07525 -2.3 -8.4 4Fe-4S binding protein compare
MMP_RS01950 -2.3 -6.0 hypothetical protein compare
MMP_RS04605 -2.2 -3.8 cobalt ECF transporter T component CbiQ compare
MMP_RS05460 -2.2 -10.9 YcaO-related McrA-glycine thioamidation protein compare
MMP_RS06725 -2.2 -12.4 hypothetical protein compare
MMP_RS00130 -2.1 -1.2 nickel-responsive transcriptional regulator NikR compare
MMP_RS04870 -2.1 -3.2 TIGR02253 family HAD-type hydrolase compare
MMP_RS01975 -2.1 -10.0 hypothetical protein compare
MMP_RS07630 -2.1 -1.0 ATP-binding cassette domain-containing protein compare
MMP_RS08785 -2.0 -1.2 RNA-protein complex protein Nop10 compare
MMP_RS00900 -2.0 -2.3 50S ribosomal protein L39e compare
MMP_RS07420 -2.0 -3.4 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS08890 -2.0 -9.7 glycosyltransferase family 4 protein compare
MMP_RS00720 -2.0 -6.8 metal-dependent hydrolase compare
MMP_RS06770 -2.0 -4.9 DHH family phosphoesterase compare
MMP_RS08330 -2.0 -3.0 NADH-quinone oxidoreductase subunit H compare


Specific Phenotypes

For 1 genes in this experiment