Experiment set3IT010 for Rhodospirillum rubrum S1H

Compare to:

Hexanoic acid 21 mM; anaerobic

200 most important genes:

  gene name fitness t score description  
Rru_A0619 -7.4 -2.5 Magnesium protoporphyrin O-methyltransferase (NCBI) compare
Rru_A2370 -6.7 -2.6 GCN5-related N-acetyltransferase (NCBI) compare
Rru_A1837 -5.2 -3.6 Porphobilinogen synthase (NCBI) compare
Rru_A3558 -5.0 -1.9 Protein of unknown function UPF0005 (NCBI) compare
Rru_A0574 -5.0 -2.2 Carboxylyase-related protein (NCBI) compare
Rru_A3594 -4.7 -4.6 Histidine biosynthesis protein HisF (NCBI) compare
Rru_A1890 -4.1 -2.3 hypothetical protein (NCBI) compare
Rru_A1239 -4.1 -1.5 Glutamate 5-kinase, ProB-related (NCBI) compare
Rru_A3341 -4.0 -2.7 Acetylglutamate kinase (NCBI) compare
Rru_A0021 -4.0 -2.3 Transcriptional Regulator, MarR family (NCBI) compare
Rru_A2100 -3.8 -6.2 Protein of unknown function DUF81 (NCBI) compare
Rru_A2847 -3.8 -1.0 Transcriptional regulators, TraR/DksA family (NCBI) compare
Rru_A1105 -3.7 -5.3 tRNA synthetase, class II (G, H, P and S) (NCBI) compare
Rru_A0058 -3.6 -1.0 Dihydrokaempferol 4-reductase (NCBI) compare
Rru_A3380 -3.4 -3.5 hypothetical protein (NCBI) compare
Rru_A2886 -3.2 -18.2 Carbamoyl-phosphate synthase, large subunit, glutamine-dependent (NCBI) compare
Rru_A3165 -3.1 -6.5 Histidinol-phosphate phosphatase, putative, inositol monophosphatase (NCBI) compare
Rru_A1021 -3.1 -1.8 Sigma 32 (RpoH) (NCBI) compare
Rru_A1620 -3.1 -1.0 hypothetical protein (NCBI) compare
Rru_A0486 -3.1 -8.0 von Willebrand factor, type A (NCBI) compare
Rru_A3393 -3.1 -3.7 Penicillin-binding protein 1A (NCBI) compare
Rru_A2525 -3.0 -11.2 Peptidase U32 (NCBI) compare
Rru_A3267 -3.0 -7.0 Methionine biosynthesis MetW (NCBI) compare
Rru_A2772 -3.0 -2.2 ATP phosphoribosyltransferase (NCBI) compare
Rru_A1189 -3.0 -12.2 3-isopropylmalate dehydratase large subunit region (NCBI) compare
Rru_A0670 -3.0 -2.2 Cobalbumin biosynthesis enzyme (NCBI) compare
Rru_A1895 -2.9 -2.1 Glutamine amidotransferase of anthranilate synthase (NCBI) compare
Rru_A3202 -2.9 -9.4 DNA topoisomerase (NCBI) compare
Rru_A3285 -2.9 -2.9 Response regulator receiver domain protein (CheY) (NCBI) compare
Rru_A0752 -2.9 -2.0 hypothetical protein (NCBI) compare
Rru_A1896 -2.8 -11.2 Anthranilate phosphoribosyl transferase (NCBI) compare
Rru_A0627 -2.8 -8.2 Bacteriochlorophyll/chlorophyll synthetase (NCBI) compare
Rru_A0652 -2.8 -2.3 Pseudouridine synthase, Rsu (NCBI) compare
Rru_A3642 -2.8 -0.9 Negative regulator of class I heat shock protein (NCBI) compare
Rru_A0469 -2.8 -11.1 Ketol-acid reductoisomerase (NCBI) compare
Rru_A2524 -2.8 -10.8 Peptidase U32 (NCBI) compare
Rru_A1827 -2.8 -9.4 Glycine hydroxymethyltransferase (NCBI) compare
Rru_A3277 -2.7 -4.0 Acetylornithine and succinylornithine aminotransferase (NCBI) compare
Rru_A0614 -2.7 -7.3 hypothetical protein (NCBI) compare
Rru_A0394 -2.7 -3.7 Amino-acid N-acetyltransferase (NCBI) compare
Rru_A0265 -2.7 -4.5 Electron-transferring-flavoproteindehydrogenase (NCBI) compare
Rru_A0613 -2.7 -5.4 Bacteriochlorophyll 4-vinyl reductase (NCBI) compare
Rru_A0397 -2.7 -6.8 Argininosuccinate lyase (NCBI) compare
Rru_A3266 -2.7 -9.5 Homoserine O-acetyltransferase (NCBI) compare
Rru_A3548 -2.7 -9.6 Magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase (NCBI) compare
Rru_A3276 -2.6 -4.3 Ornithine carbamoyltransferase (NCBI) compare
Rru_A1786 -2.6 -15.5 Dihydroxy-acid dehydratase (NCBI) compare
Rru_A3264 -2.6 -8.0 Histidinol-phosphate aminotransferase (NCBI) compare
Rru_A3162 -2.6 -10.1 Prephenate dehydratase (NCBI) compare
Rru_A2992 -2.6 -2.9 Precorrin-6Y C5,15-methyltransferase (decarboxylating) (NCBI) compare
Rru_A0618 -2.6 -9.7 PUCC protein (NCBI) compare
Rru_A3425 -2.6 -4.6 Phosphoribosylanthranilate isomerase (NCBI) compare
Rru_A2549 -2.5 -4.9 HAD-superfamily hydrolase subfamily IIB (NCBI) compare
Rru_A0620 -2.5 -5.9 Light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein (NCBI) compare
Rru_A2760 -2.5 -0.7 hypothetical protein (NCBI) compare
Rru_A0621 -2.5 -11.7 Magnesium-chelatase, subunit H (NCBI) compare
Rru_A2497 -2.5 -5.7 Peptide chain release factor 3 (NCBI) compare
Rru_A2974 -2.5 -8.3 Photosynthetic reaction centre M subunit (NCBI) compare
Rru_A1897 -2.5 -4.9 Indole-3-glycerol-phosphate synthase (NCBI) compare
Rru_A2978 -2.5 -9.3 Chlorophyllide reductase subunit Z (NCBI) compare
Rru_A2935 -2.5 -5.6 PAS/PAC Sensor Hybrid Histidine Kinase (NCBI) compare
Rru_A0467 -2.5 -11.2 Acetolactate synthase, large subunit, biosynthetic type (NCBI) compare
Rru_A0622 -2.5 -8.1 Light-independent protochlorophyllide reductase, B subunit (NCBI) compare
Rru_A3428 -2.5 -12.1 Tryptophan synthase (NCBI) compare
Rru_A1865 -2.5 -4.0 Dihydrodipicolinate synthase subfamily (NCBI) compare
Rru_A1530 -2.5 -12.0 5,10-methylenetetrahydrofolate reductase (NCBI) compare
Rru_A0485 -2.4 -5.0 Magnesium chelatase ATPase subunit I (NCBI) compare
Rru_A1191 -2.4 -8.6 3-isopropylmalate dehydrogenase (NCBI) compare
Rru_A1348 -2.4 -2.7 Protein of unknown function DUF81 (NCBI) compare
Rru_A3751 -2.4 -10.0 Argininosuccinate synthase (NCBI) compare
Rru_A2771 -2.4 -3.7 Histidinol dehydrogenase (NCBI) compare
Rru_A1201 -2.3 -9.8 MaoC-like dehydratase (NCBI) compare
Rru_A2980 -2.3 -8.3 Chlorophyllide reductase iron protein subunit X (NCBI) compare
Rru_A1691 -2.3 -5.6 Spermine synthase (NCBI) compare
Rru_B0049 -2.3 -2.1 dTDP-4-dehydrorhamnose reductase (NCBI) compare
Rru_A0683 -2.3 -0.6 3-deoxy-7-phosphoheptulonate synthase (NCBI) compare
Rru_A1572 -2.3 -3.5 Glyoxalase/bleomycin resistance protein/dioxygenase (NCBI) compare
Rru_A3445 -2.3 -11.0 Phosphoenolpyruvate-protein phosphotransferase (NCBI) compare
Rru_A1200 -2.3 -3.7 Citrate lyase (NCBI) compare
Rru_A0625 -2.3 -3.0 hypothetical protein (NCBI) compare
Rru_A0468 -2.2 -3.9 Acetolactate synthase, small subunit (NCBI) compare
Rru_A1894 -2.2 -6.2 heavy metal translocating P-type ATPase (NCBI) compare
Rru_A2975 -2.2 -9.4 Photosynthetic reaction centre protein L subunit (NCBI) compare
Rru_A1536 -2.2 -3.9 UvrD/REP helicase (NCBI) compare
Rru_A2363 -2.2 -6.5 Endonuclease/exonuclease/phosphatase (NCBI) compare
Rru_A0217 -2.2 -9.8 Citrate lyase (NCBI) compare
Rru_A2183 -2.2 -7.5 NAD(P)(+) transhydrogenase (AB-specific) (NCBI) compare
Rru_A3227 -2.1 -5.7 conserved hypothetical protein, potential methyltransferase (NCBI) compare
Rru_A3010 -2.1 -5.8 Transcriptional Regulator, DeoR family (NCBI) compare
Rru_A0616 -2.1 -7.2 photosynthetic complex assembly protein (NCBI) compare
Rru_A0404 -2.1 -14.6 Amidophosphoribosyl transferase (NCBI) compare
Rru_A2981 -2.1 -4.2 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide (NCBI) compare
Rru_A2181 -2.1 -9.0 NAD(P) transhydrogenase, beta subunit (NCBI) compare
Rru_A2008 -2.1 -12.3 Thiamine biosynthesis protein ThiC (NCBI) compare
Rru_A2979 -2.1 -7.1 Chlorophyllide reductase subunit Y (NCBI) compare
Rru_A3547 -2.1 -4.1 hypothetical protein (NCBI) compare
Rru_A3397 -2.0 -1.8 hypothetical protein (NCBI) compare
Rru_A2246 -2.0 -12.8 Glucose-1-phosphate adenylyltransferase (NCBI) compare
Rru_A0398 -2.0 -3.9 Thiol-disulfide isomerase and thioredoxins-like (NCBI) compare
Rru_A0296 -2.0 -1.3 hypothetical protein (NCBI) compare
Rru_A1537 -2.0 -1.5 hypothetical protein (NCBI) compare
Rru_A0624 -2.0 -6.4 2-vinyl bacteriochlorophyllide hydratase (NCBI) compare
Rru_A3773 -2.0 -2.3 CBS domain protein (NCBI) compare
Rru_A2115 -2.0 -6.6 Phosphoglucomutase/phosphomannomutase (NCBI) compare
Rru_A3427 -1.9 -9.9 Tryptophan synthase, beta chain (NCBI) compare
Rru_A2956 -1.9 -10.1 Pyruvate, phosphate dikinase (NCBI) compare
Rru_A0207 -1.9 -5.0 Cobalt chelatase, CobT subunit (NCBI) compare
Rru_A0617 -1.9 -3.5 Photosynthetic reaction center, H-chain (NCBI) compare
Rru_A2421 -1.9 -4.9 N-acetyl-gamma-glutamyl-phosphate reductase (NCBI) compare
Rru_A1048 -1.9 -2.3 Protein of unknown function DUF465 (NCBI) compare
Rru_A2167 -1.9 -6.4 Phosphoribosylformylglycinamidine cyclo-ligase (NCBI) compare
Rru_A0615 -1.9 -2.6 photosynthetic complex assembly protein (NCBI) compare
Rru_A1112 -1.9 -1.0 hypothetical protein (NCBI) compare
Rru_A1552 -1.9 -2.0 Peptidase S16, ATP-dependent protease La (NCBI) compare
Rru_A3064 -1.9 -7.9 Isovaleryl-CoA dehydrogenase (NCBI) compare
Rru_A0148 -1.8 -3.8 GTP-binding protein TypA (NCBI) compare
Rru_A2440 -1.8 -2.1 NADH:ubiquinone oxidoreductase 17.2 kD subunit (NCBI) compare
Rru_A2901 -1.8 -1.5 Histidine triad (HIT) protein (NCBI) compare
Rru_A3539 -1.8 -6.1 GlnB (protein PII) uridylyltransferase, GlnD (NCBI) compare
Rru_A2952 -1.8 -2.1 Methyltransferase small (NCBI) compare
Rru_A2486 -1.8 -2.8 Glucokinase (NCBI) compare
Rru_A2398 -1.8 -11.5 Pyruvate-ferredoxin (flavodoxin) oxidoreductase (NCBI) compare
Rru_A3395 -1.7 -9.6 Transcriptional Regulator, LuxR family (NCBI) compare
Rru_A0053 -1.7 -7.9 Carboxyl transferase (NCBI) compare
Rru_A3206 -1.7 -3.9 Response regulator receiver domain protein (CheY) (NCBI) compare
Rru_A1898 -1.7 -1.9 SOS-response transcriptional repressor, LexA (NCBI) compare
Rru_A3009 -1.7 -2.7 Aminotransferase class-III (NCBI) compare
Rru_A2411 -1.7 -5.8 Aminotransferase, class I and II (NCBI) compare
Rru_A1190 -1.6 -1.0 3-isopropylmalate dehydratase small subunit region (NCBI) compare
Rru_A1308 -1.6 -9.3 Acyl-CoA dehydrogenase (NCBI) compare
Rru_A3062 -1.6 -9.9 Methylmalonyl-CoA mutase-like (NCBI) compare
Rru_A1928 -1.6 -8.5 Yeast 2-isopropylmalate synthase (NCBI) compare
Rru_A3054 -1.6 -1.8 Ribonuclease H (NCBI) compare
Rru_A2770 -1.6 -2.1 Uncharacterized conserved protein UCP032146 (NCBI) compare
Rru_A3396 -1.6 -6.5 Autoinducer synthesis protein (NCBI) compare
Rru_A2885 -1.6 -5.7 Carbamoyl-phosphate synthase, small subunit (NCBI) compare
Rru_A2029 -1.6 -0.8 Serine O-acetyltransferase (NCBI) compare
Rru_A0181 -1.6 -3.2 hypothetical protein (NCBI) compare
Rru_A2982 -1.6 -4.4 O-methyltransferase, family 2 (NCBI) compare
Rru_A2399 -1.6 -3.6 conserved hypothetical protein VC1941 (NCBI) compare
Rru_A1311 -1.5 -1.9 Transcriptional Regulator, MerR family (NCBI) compare
Rru_A1309 -1.5 -5.3 acetoacetyl-CoA reductase (NCBI) compare
Rru_A2400 -1.5 -8.2 Ribulose-bisphosphate carboxylase, form II (NCBI) compare
Rru_A0435 -1.5 -8.4 Acyl-CoA dehydrogenase (NCBI) compare
Rru_A0554 -1.5 -2.9 Rh-like protein/ammonium transporter (NCBI) compare
Rru_A0493 -1.5 -6.2 Phytoene desaturase (NCBI) compare
Rru_A3533 -1.5 -3.5 hypothetical protein (NCBI) compare
Rru_A1607 -1.5 -7.2 4-alpha-glucanotransferase (NCBI) compare
Rru_A3766 -1.5 -3.0 Transcriptional Regulator, MucR family (NCBI) compare
Rru_A0052 -1.5 -9.1 Biotin carboxylase (NCBI) compare
Rru_A3527 -1.5 -3.4 Protein of unknown function YGGT (NCBI) compare
Rru_A1310 -1.5 -3.7 Acetyl-CoA C-acyltransferase (NCBI) compare
Rru_A1804 -1.5 -3.8 N-acetyltransferase (NCBI) compare
Rru_A2723 -1.5 -1.9 Rubrerythrin (NCBI) compare
Rru_A2200 -1.4 -1.8 DNA polymerase III chi subunit, HolC (NCBI) compare
Rru_A2038 -1.4 -4.3 Glutamate-ammonia-ligase adenylyltransferase (NCBI) compare
Rru_A1473 -1.4 -2.1 hypothetical protein (NCBI) compare
Rru_A0270 -1.4 -6.5 Protein of unknown function DUF525 (NCBI) compare
Rru_A3537 -1.4 -1.3 Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain (NCBI) compare
Rru_A0741 -1.4 -4.6 Signal Transduction Histidine Kinase (NCBI) compare
Rru_A3167 -1.4 -2.5 Binding-protein-dependent transport systems inner membrane component (NCBI) compare
Rru_A0643 -1.4 -3.2 Protein of unknown function DUF152 (NCBI) compare
Rru_A3087 -1.3 -4.6 hypothetical protein (NCBI) compare
Rru_A0096 -1.3 -2.5 Secretion protein HlyD (NCBI) compare
Rru_A1031 -1.3 -2.5 Ethanolamine ammonia-lyase (NCBI) compare
Rru_A1085 -1.3 -1.2 Metallophosphoesterase (NCBI) compare
Rru_A3079 -1.3 -3.9 3-hydroxybutyryl-CoA dehydrogenase (NCBI) compare
Rru_A1854 -1.3 -5.4 Pyridoxal phosphate biosynthetic protein PdxJ (NCBI) compare
Rru_A0291 -1.3 -1.4 hypothetical protein (NCBI) compare
Rru_A2049 -1.3 -4.1 Transcriptional Regulator, TetR family (NCBI) compare
Rru_A1849 -1.3 -0.8 Recombination protein O, RecO (NCBI) compare
Rru_A2354 -1.3 -3.8 adenylate cyclase (NCBI) compare
Rru_A1834 -1.3 -4.9 Enoyl-CoA hydratase/isomerase (NCBI) compare
Rru_A1608 -1.3 -6.6 MscS Mechanosensitive ion channel (NCBI) compare
Rru_A2936 -1.3 -6.0 Dihydroorotase multifunctional complex type (NCBI) compare
Rru_A2479 -1.3 -5.3 Methylmalonyl-CoA mutase-like (NCBI) compare
Rru_A0243 -1.3 -3.4 tRNA/rRNA cytosine-C5-methylase (NCBI) compare
Rru_A1286 -1.3 -0.6 hypothetical protein (NCBI) compare
Rru_A1221 -1.3 -5.4 hypothetical protein (NCBI) compare
Rru_A3468 -1.3 -1.5 Transcriptional Regulator, AsnC family (NCBI) compare
Rru_A2907 -1.3 -1.1 Anti-Sigma-factor antagonist (STAS) domain protein (NCBI) compare
Rru_A2037 -1.3 -3.2 hypothetical protein (NCBI) compare
Rru_A0274 -1.3 -3.2 Acetyl-CoA C-acetyltransferase (NCBI) compare
Rru_A0770 -1.3 -3.2 Peptidase M23B (NCBI) compare
Rru_A0494 -1.2 -4.6 Squalene/phytoene synthase (NCBI) compare
Rru_A0071 -1.2 -4.4 hypothetical protein (NCBI) compare
Rru_A2446 -1.2 -2.4 ABC transporter component (NCBI) compare
Rru_A3634 -1.2 -1.4 Protein of unknown function UPF0001 (NCBI) compare
Rru_A0686 -1.2 -1.0 Transcriptional Regulator, LysR family (NCBI) compare
Rru_A0164 -1.2 -6.0 Sulfate transporter/antisigma-factor antagonist (NCBI) compare
Rru_A2951 -1.2 -1.0 hypothetical protein (NCBI) compare
Rru_A3424 -1.2 -1.6 Orotidine-5'-phosphate decarboxylase (NCBI) compare
Rru_A2897 -1.2 -2.2 Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (NCBI) compare
Rru_A0155 -1.2 -1.9 Transcriptional Regulator, TetR family (NCBI) compare
Rru_A3063 -1.2 -5.5 Crotonyl-CoA reductase (NCBI) compare
Rru_A2264 -1.2 -1.9 ferredoxin (NCBI) compare
Rru_A0432 -1.2 -4.5 4-hydroxythreonine-4-phosphate dehydrogenase (NCBI) compare
Rru_A2603 -1.2 -4.3 Two Component Transcriptional Regulator, LuxR family (NCBI) compare
Rru_A2079 -1.2 -7.3 Glutamate--ammonia ligase (NCBI) compare
Rru_A2000 -1.2 -2.4 hypothetical protein (NCBI) compare


Specific Phenotypes

For 1 genes in this experiment

For carbon source Hexanoic acid in Rhodospirillum rubrum S1H

For carbon source Hexanoic acid across organisms