Experiment set3IT009 for Pseudomonas syringae pv. syringae B728a

Compare to:

KB with Acridine orange 62.5 ug/ml

200 most important genes:

  gene name fitness t score description  
Psyr_1544 -5.5 -7.4 SirA-like protein compare
Psyr_1614 -4.9 -4.3 lipid A biosynthesis acyltransferase compare
Psyr_4362 -4.2 -5.3 Rare lipoprotein A compare
Psyr_1613 -4.0 -5.3 septum site-determining protein MinC compare
Psyr_0014 -3.9 -5.3 lipid A biosynthesis acyltransferase compare
Psyr_4740 -3.8 -7.9 thiazole-phosphate synthase compare
Psyr_1268 -3.6 -7.6 extracellular solute-binding protein, family 3:SLT compare
Psyr_0951 -3.6 -2.7 UBA/THIF-type NAD/FAD binding fold:MoeZ/MoeB compare
Psyr_1373 -3.5 -3.4 Peptidoglycan-binding LysM:Peptidase M23B compare
Psyr_1719 -3.4 -3.5 conserved hypothetical protein compare
Psyr_4116 -3.1 -2.0 Transport-associated protein compare
Psyr_4144 -3.1 -1.3 Protein of unknown function DUF1239 compare
Psyr_0917 -3.1 -12.1 ABC-2 compare
Psyr_4009 -3.0 -8.1 RND efflux system, outer membrane lipoprotein, NodT compare
Psyr_4340 -2.9 -6.5 phosphomethylpyrimidine kinase, putative compare
Psyr_0918 -2.9 -12.8 ABC transporter compare
Psyr_5132 -2.8 -3.9 Glucose-inhibited division protein A subfamily compare
Psyr_4341 -2.6 -7.2 thiamine-phosphate diphosphorylase compare
Psyr_4683 -2.6 -4.5 dethiobiotin synthase compare
Psyr_1097 -2.4 -2.3 glycine cleavage system H protein compare
Psyr_4581 -2.4 -3.1 anthranilate synthase, component II compare
Psyr_0383 -2.4 -2.8 Twin-arginine translocation protein TatB compare
Psyr_3751 -2.3 -4.2 Carbon storage regulator compare
Psyr_4991 -2.3 -2.3 hypothetical protein compare
Psyr_3262 -2.1 -2.5 dnaK suppressor protein, putative compare
Psyr_2080 -2.1 -5.0 aminodeoxychorismate synthase, subunit I compare
Psyr_4884 -2.1 -5.4 Rhodanese-like protein compare
Psyr_0475 -2.1 -2.1 Protein of unknown function YGGT compare
Psyr_4361 -2.0 -1.9 penicillin-binding protein 6, Serine peptidase, MEROPS family S11 compare
Psyr_2641 -2.0 -2.7 hypothetical protein compare
Psyr_1650 -1.9 -2.8 aminodeoxychorismate lyase apoprotein compare
Psyr_3281 -1.9 -3.6 Glycoside hydrolase, family 3, N-terminal compare
Psyr_2285 -1.9 -2.4 Twin-arginine translocation pathway signal compare
Psyr_2347 -1.8 -2.3 hypothetical protein compare
Psyr_2872 -1.8 -1.5 hypothetical protein compare
Psyr_0635 -1.8 -2.6 MaoC-like dehydratase compare
Psyr_2383 -1.8 -3.1 Protein of unknown function DUF72 compare
Psyr_1247 -1.7 -2.5 conserved hypothetical protein compare
Psyr_4087 -1.7 -1.3 Protein of unknown function DUF520 compare
Psyr_3008 -1.7 -3.9 Undecaprenyl-diphosphatase compare
Psyr_2767 -1.7 -2.2 Glycoside hydrolase, family 19 compare
Psyr_4262 -1.7 -1.1 lipoprotein, putative compare
Psyr_4686 -1.7 -4.8 8-amino-7-oxononanoate synthase compare
Psyr_1747 -1.7 -3.0 ATP-dependent Clp protease proteolytic subunit ClpP compare
Psyr_1935 -1.7 -4.4 Protein of unknown function DUF796 compare
Psyr_2823 -1.6 -1.1 hypothetical protein compare
Psyr_0454 -1.6 -4.1 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme compare
Psyr_2069 -1.6 -2.2 conserved hypothetical protein compare
Psyr_4837 -1.6 -8.6 Heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase:Heavy metal translocating P-type ATPase compare
Psyr_0849 -1.6 -4.5 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
Psyr_4687 -1.6 -4.9 biotin synthase compare
Psyr_3926 -1.6 -2.0 transcriptional regulator, PadR family compare
Psyr_4566 -1.6 -5.9 Peptidase M23B compare
Psyr_2980 -1.6 -2.0 UDP-glucose pyrophosphorylase compare
Psyr_3954 -1.5 -3.5 GTP-binding protein LepA compare
Psyr_1910 -1.5 -4.2 VacJ-like lipoprotein compare
Psyr_0978 -1.5 -4.7 lipoprotein, putative compare
Psyr_3213 -1.5 -2.4 Propeptide, PepSY amd peptidase M4 compare
Psyr_3199 -1.5 -2.0 NADH dehydrogenase subunit D / NADH dehydrogenase subunit C compare
Psyr_2209 -1.5 -2.1 ABC transporter, substrate-binding protein, aliphatic sulfonate compare
Psyr_2973 -1.5 -1.8 Glyoxalase I compare
Psyr_2182 -1.5 -3.9 hypothetical protein compare
Psyr_3631 -1.5 -3.0 GreA/GreB family elongation factor compare
Psyr_1751 -1.4 -3.4 PpiC-type peptidyl-prolyl cis-trans isomerase compare
Psyr_2514 -1.4 -3.0 ABC transporter compare
Psyr_0487 -1.4 -1.7 glutathione synthase compare
Psyr_3459 -1.4 -2.1 Helix-turn-helix, Fis-type compare
Psyr_0550 -1.4 -3.3 Protein of unknown function UPF0227 compare
Psyr_0394 -1.4 -3.2 Heat shock protein HslU compare
Psyr_2855 -1.4 -3.4 methionine synthase (B12-independent) compare
Psyr_0529 -1.4 -3.4 Glycosyl transferase, group 1 compare
Psyr_1556 -1.4 -1.0 hypothetical protein compare
Psyr_0826 -1.3 -5.4 glucose-6-phosphate isomerase compare
Psyr_3837 -1.3 -1.6 conserved hypothetical protein compare
Psyr_4140 -1.3 -2.2 Protein of unknown function DUF140 compare
Psyr_0319 -1.3 -4.2 conserved hypothetical protein compare
Psyr_0033 -1.3 -2.2 tryptophan synthase, alpha chain compare
Psyr_3807 -1.3 -3.9 hypothetical protein compare
Psyr_3840 -1.3 -2.6 conserved hypothetical protein compare
Psyr_3691 -1.3 -4.2 conserved hypothetical protein compare
Psyr_4627 -1.3 -1.6 dimethyladenosine transferase compare
Psyr_1447 -1.3 -1.7 conserved hypothetical protein compare
Psyr_3808 -1.3 -0.6 hypothetical protein compare
Psyr_0464 -1.3 -1.4 hypothetical protein compare
Psyr_0575 -1.2 -1.2 protease FtsH subunit HflC compare
Psyr_0976 -1.2 -3.7 Malate:quinone-oxidoreductase compare
Psyr_2393 -1.2 -2.6 Flavin reductase-like protein compare
Psyr_3179 -1.2 -2.0 DNA translocase FtsK compare
Psyr_3581 -1.2 -3.2 ribosomal large subunit pseudouridine synthase B compare
Psyr_0259 -1.2 -2.3 Osmolarity sensor protein envZ compare
Psyr_1930 -1.2 -2.3 hypothetical protein compare
Psyr_0736 -1.2 -1.8 umuC protein compare
Psyr_2929 -1.2 -2.2 transcriptional regulator, LysR family compare
Psyr_1227 -1.2 -1.5 Queuosine biosynthesis protein compare
Psyr_3806 -1.2 -2.0 hypothetical protein compare
Psyr_2227 -1.2 -0.9 conserved hypothetical protein compare
Psyr_4007 -1.2 -4.7 Secretion protein HlyD compare
Psyr_2211 -1.2 -1.5 monooxygenase, NtaA/SnaA/SoxA family compare
Psyr_2196 -1.2 -1.6 Urease accessory protein UreG compare
Psyr_2906 -1.2 -2.5 Pilus retraction protein PilT compare
Psyr_3088 -1.1 -3.4 Glycosyl transferase, group 1 compare
Psyr_3107 -1.1 -2.9 conserved hypothetical protein compare
Psyr_4819 -1.1 -5.7 conserved hypothetical protein compare
Psyr_3701 -1.1 -2.0 thioredoxin, putative compare
Psyr_2221 -1.1 -1.4 sarcosine oxidase, gamma subunit compare
Psyr_2039 -1.1 -1.3 Fimbrial protein compare
Psyr_1121 -1.1 -1.3 6-phosphogluconolactonase compare
Psyr_3127 -1.1 -2.5 Response regulator receiver:Transcriptional regulatory protein, C-terminal compare
Psyr_2990 -1.1 -2.2 conserved hypothetical protein compare
Psyr_0215 -1.1 -4.7 Exodeoxyribonuclease III xth compare
Psyr_4158 -1.1 -5.0 conserved hypothetical protein compare
Psyr_2014 -1.1 -2.2 conserved hypothetical protein compare
Psyr_1050 -1.1 -3.1 conserved hypothetical protein compare
Psyr_0565 -1.1 -3.2 Protein of unknown function UPF0126 compare
Psyr_2095 -1.1 -2.7 Conserved TM helix compare
Psyr_2866 -1.1 -3.4 Secretion protein HlyD compare
Psyr_0268 -1.1 -2.4 DSBA oxidoreductase compare
Psyr_1460 -1.1 -2.7 hypothetical protein compare
Psyr_0377 -1.1 -3.9 Periplasmic glucan biosynthesis protein, MdoG compare
Psyr_0919 -1.1 -5.4 Chromosome segregation ATPase-like protein compare
Psyr_1824 -1.1 -3.3 amino acid ABC transporter substrate-binding protein, PAAT family compare
Psyr_4203 -1.1 -1.1 SsrA-binding protein compare
Psyr_4512 -1.1 -4.2 putative phage-related protein compare
Psyr_4933 -1.1 -3.8 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase compare
Psyr_4008 -1.1 -6.0 Hydrophobe/amphiphile efflux-1 HAE1 compare
Psyr_2266 -1.1 -1.6 Binding-protein-dependent transport systems inner membrane component compare
Psyr_3611 -1.1 -1.9 Protein of unknown function DUF815 compare
Psyr_3462 -1.1 -1.9 conserved hypothetical protein compare
Psyr_2595 -1.0 -2.4 Dimethylmenaquinone methyltransferase compare
Psyr_1667 -1.0 -2.4 Colicin V production protein compare
Psyr_0885 -1.0 -1.5 conserved hypothetical protein compare
Psyr_0822 -1.0 -1.1 1-phosphofructokinase compare
Psyr_3696 -1.0 -2.4 23S rRNA m(5)U-1939 methyltransferase compare
Psyr_4567 -1.0 -1.9 Protein of unknown function UPF0075 compare
Psyr_4112 -1.0 -4.2 Protein of unknown function UPF0011 compare
Psyr_3755 -1.0 -0.9 conserved hypothetical protein compare
Psyr_0378 -1.0 -4.9 Glycosyl transferase, family 2 compare
Psyr_1702 -1.0 -2.7 regulatory protein, LuxR compare
Psyr_5133 -1.0 -2.1 tRNA modification GTPase trmE compare
Psyr_4634 -1.0 -0.6 Polynucleotide adenylyltransferase:Metal-dependent phosphohydrolase, HD subdomain protein compare
Psyr_2642 -1.0 -2.3 hypothetical protein compare
Psyr_4416 -1.0 -2.2 precorrin-8X methylmutase compare
Psyr_2769 -1.0 -1.9 conserved hypothetical protein compare
Psyr_0831 -1.0 -1.1 Two-component response regulator CbrB compare
Psyr_5135 -1.0 -0.9 Protein of unknown function DUF37 compare
Psyr_1449 -1.0 -1.6 hypothetical protein compare
Psyr_4316 -1.0 -1.4 conserved hypothetical protein compare
Psyr_2854 -1.0 -2.7 conserved hypothetical protein compare
Psyr_3280 -1.0 -1.4 methylthioadenosine phosphorylase compare
Psyr_0927 -1.0 -1.5 hypothetical protein compare
Psyr_2943 -0.9 -2.5 amino acid ABC transporter membrane protein 2, PAAT family compare
Psyr_1123 -0.9 -2.2 conserved hypothetical protein compare
Psyr_2897 -0.9 -2.9 regulatory protein, LuxR:Response regulator receiver compare
Psyr_3685 -0.9 -3.2 Silent information regulator protein Sir2 compare
Psyr_2518 -0.9 -2.7 conserved hypothetical protein compare
Psyr_0574 -0.9 -2.0 protease FtsH subunit HflK compare
Psyr_1718 -0.9 -2.0 von Willebrand factor, type A compare
Psyr_0435 -0.9 -0.7 membrane protein, putative compare
Psyr_2770 -0.9 -2.9 tail fiber domain protein compare
Psyr_2779 -0.9 -1.5 Phage minor tail compare
Psyr_2112 -0.9 -1.2 Protein with unknown function DUF469 compare
Psyr_2738 -0.9 -1.7 regulatory protein, LysR compare
Psyr_1721 -0.9 -2.2 moxR protein, putative compare
Psyr_3084 -0.9 -1.7 Response regulator receiver:Transcriptional regulatory protein, C-terminal compare
Psyr_4967 -0.9 -2.3 conserved hypothetical protein compare
Psyr_1163 -0.9 -1.9 Isochorismatase hydrolase compare
Psyr_3625 -0.9 -2.4 Protein of unknown function DUF81 compare
Psyr_0235 -0.9 -3.1 D-amino acid dehydrogenase small subunit compare
Psyr_2954 -0.9 -2.6 Phospholipase/Carboxylesterase compare
Psyr_2342 -0.9 -1.3 CBS:Transporter-associated region:Integral membrane protein TerC compare
Psyr_2538 -0.9 -1.4 Binding-protein-dependent transport systems inner membrane component compare
Psyr_3089 -0.9 -6.1 Hemolysin-type calcium-binding region:hemolysin-type calcium binding related protein compare
Psyr_0199 -0.9 -0.8 Glutathione-dependent formaldehyde-activating, GFA compare
Psyr_0270 -0.9 -1.8 DNA polymerase I compare
Psyr_1929 -0.9 -2.0 hypothetical protein compare
Psyr_2520 -0.9 -0.6 SOS-response transcriptional repressor, LexA compare
Psyr_2970 -0.9 -2.0 TPR repeat protein:TPR repeat protein compare
Psyr_3164 -0.9 -3.1 Protein of unknown function UPF0005 compare
Psyr_1408 -0.9 -0.9 Holliday junction endonuclease RuvC compare
Psyr_0923 -0.9 -2.0 hypothetical protein compare
Psyr_3529 -0.9 -1.7 Asp/Glu racemase compare
Psyr_3665 -0.9 -2.0 conserved hypothetical protein compare
Psyr_2320 -0.9 -2.7 YD repeat protein compare
Psyr_3341 -0.9 -2.0 hypothetical protein compare
Psyr_4472 -0.9 -2.4 lipoprotein, putative compare
Psyr_3105 -0.8 -2.1 phosphate ABC transporter membrane protein 1, PhoT family compare
Psyr_2114 -0.8 -1.9 two component transcriptional regulator, LuxR family compare
Psyr_0231 -0.8 -1.5 conserved hypothetical protein compare
Psyr_4750 -0.8 -1.3 cell division ATP-binding protein FtsE compare
Psyr_3698 -0.8 -2.5 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal:Hpt compare
Psyr_2030 -0.8 -1.3 Calcium-binding EF-hand compare
Psyr_2195 -0.8 -2.1 Urease accessory protein UreD compare
Psyr_4178 -0.8 -2.8 tRNA pseudouridine synthase B compare
Psyr_1963 -0.8 -2.3 Cyclic peptide transporter compare
Psyr_2356 -0.8 -2.6 Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer compare
Psyr_2428 -0.8 -1.6 GCN5-related N-acetyltransferase compare
Psyr_4115 -0.8 -0.9 phosphoheptose isomerase compare
Psyr_1554 -0.8 -1.6 hypothetical protein compare
Psyr_2508 -0.8 -1.5 transcriptional regulator, IclR family compare
Psyr_2226 -0.8 -2.2 formyltetrahydrofolate deformylase compare


Specific Phenotypes

For 3 genes in this experiment

For stress Acridine orange in Pseudomonas syringae pv. syringae B728a

For stress Acridine orange across organisms