Experiment set3IT007 for Sinorhizobium meliloti 1021

Compare to:

L-Asparagine nitrogen source

200 most important genes:

  gene name fitness t score description  
SM_b21175 -7.8 -3.0 phosphate uptake ABC transporter permease compare
SMc04405 -7.3 -4.3 3-isopropylmalate dehydrogenase compare
SMc02572 -7.1 -3.2 imidazole glycerol phosphate synthase subunit HisH compare
SMc01843 -7.0 -9.6 5,10-methylenetetrahydrofolate reductase compare
SMc02899 -6.9 -9.5 prephenate dehydratase compare
SMc01801 -6.8 -2.3 N-acetylglutamylphosphate reductase (EC 1.2.1.38) (from data) compare
SMc02717 -6.7 -10.3 2-isopropylmalate synthase compare
SMc01494 -6.6 -10.6 phosphoserine phosphatase compare
SMc03801 -6.5 -2.2 thioredoxin protein compare
SMc00917 -6.2 -4.0 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
SMc00494 -6.2 -1.2 phosphoribosylformylglycinamidine synthase subunit PurS compare
SMc00640 -6.2 -8.4 phosphoserine aminotransferase compare
SMc00918 -5.8 -8.4 ATP phosphoribosyltransferase regulatory subunit compare
SMc02137 -5.6 -2.3 ornithine carbamoyltransferase compare
SMc01431 -5.5 -13.9 acetolactate synthase 3 catalytic subunit compare
SMc03797 -5.4 -8.9 homoserine O-succinyltransferase compare
SMc02569 -5.4 -3.1 imidazole glycerol phosphate synthase subunit HisF compare
SMc03070 -5.4 -8.8 glucose-6-phosphate 1-dehydrogenase compare
SMc03777 -5.4 -7.8 gamma-glutamyl phosphate reductase compare
SMc03826 -5.3 -2.5 argininosuccinate synthase compare
SMc00711 -5.3 -3.8 cyclohexadienyl dehydrogenase compare
SMc04045 -5.2 -7.2 dihydroxy-acid dehydratase compare
SMc00555 -5.1 -1.0 colicin V production transmembrane protein compare
SMc01360 -5.1 -2.4 aspartate carbamoyltransferase catalytic subunit compare
SMc01208 -5.1 -2.4 peptidyl-prolyl cis-trans isomerase B protein compare
SMc02107 -5.0 -1.0 hypothetical protein compare
SMc03112 -5.0 -15.6 B12-dependent methionine synthase compare
SMc01881 -5.0 -2.5 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
SMc01364 -5.0 -1.0 DNA topoisomerase I compare
SMc00856 -4.9 -0.9 hypothetical protein compare
SMc04002 -4.8 -5.2 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
SMc02570 -4.8 -6.1 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
SMc01004 -4.8 -5.3 phosphoribosyl-AMP cyclohydrolase compare
SMc02245 -4.7 -4.6 dihydroorotate dehydrogenase 2 compare
SMc02510 -4.6 -0.9 ferric uptake regulation protein compare
SMc03763 -4.6 -2.6 cytosine-specific methyltransferase compare
SMc01726 -4.5 -4.6 acetylglutamate kinase compare
SMc04346 -4.5 -6.2 ketol-acid reductoisomerase compare
SMa1635 -4.5 -1.2 hypothetical protein compare
SMc02755 -4.5 -5.6 S-adenosyl-L-homocysteine hydrolase compare
SMc02084 -4.5 -0.9 biopolymer transport transmembrane protein compare
SMc02767 -4.4 -6.3 N-(5'-phosphoribosyl)anthranilate isomerase compare
SMc01569 -4.4 -1.2 carbamoyl phosphate synthase small subunit compare
SMc00726 -4.2 -0.8 thiol:disulfide interchange redox-active center transmembrane protein compare
SMc02307 -4.2 -6.3 histidinol dehydrogenase compare
SMc01568 -4.2 -1.1 hypothetical protein compare
SMc01147 -4.1 -2.5 coproporphyrinogen III oxidase compare
SMc02165 -4.1 -9.8 orotate phosphoribosyltransferase compare
SMc02574 -4.1 -4.5 imidazoleglycerol-phosphate dehydratase compare
SMc01880 -4.0 -2.3 pantoate--beta-alanine ligase compare
SMc04330 -4.0 -2.3 trimethylamine methyltransferase compare
SMc02217 -4.0 -4.9 O-succinylhomoserine sulfhydrylase compare
SMc01215 -4.0 -2.7 carbamoyl phosphate synthase large subunit compare
SMc03823 -4.0 -6.0 isopropylmalate isomerase large subunit compare
SMc00412 -4.0 -4.3 orotidine 5'-phosphate decarboxylase compare
SMc04001 -3.9 -0.8 phosphoribosylaminoimidazole carboxylase catalytic subunit protein compare
SMc00493 -3.9 -4.1 phosphoribosylformylglycinamidine synthase I compare
SMc02719 -3.9 -0.7 transposase compare
SMc00088 -3.9 -1.5 hypothetical protein compare
SMc00565 -3.8 -1.0 50S ribosomal protein L9 compare
SMc01929 -3.8 -3.3 hypothetical protein compare
SMc02246 -3.8 -0.7 hypothetical protein compare
SM_b21509 -3.8 -2.0 plasmid stability protein compare
SMc00641 -3.7 -6.9 D-3-phosphoglycerate dehydrogenase compare
SMc00294 -3.7 -7.2 aminotransferase compare
SMc04224 -3.7 -1.0 hypothetical protein compare
SMc04866 -3.7 -2.6 hypothetical protein compare
SMc02280 -3.6 -1.4 hypothetical protein compare
SMc03795 -3.6 -1.0 isopropylmalate isomerase small subunit compare
SMc04391 -3.6 -1.5 3-ketoacyl-ACP reductase compare
SMc04028 -3.6 -13.4 glutamate synthase compare
SM_b21176 -3.6 -4.2 phosphate uptake ABC transporter substrate-binding protein precursor compare
SMc00166 -3.5 -1.3 oxidoreductase NAD protein compare
SMc01723 -3.5 -1.6 hypothetical protein compare
SMa1933 -3.5 -2.3 LysR family transcriptional regulator compare
SMc02166 -3.5 -7.8 dihydroorotase compare
SMc03774 -3.5 -2.1 hypothetical protein compare
SMc04296 -3.4 -0.9 cell division protein FtsZ compare
SMc00236 -3.4 -2.8 Indole-3-glycerol phosphate synthase compare
SMc00017 -3.4 -0.9 homoserine kinase compare
SM_b21174 -3.4 -4.4 phosphate uptake ABC transporter permease compare
SMc00235 -3.4 -6.0 anthranilate phosphoribosyltransferase compare
SMc02138 -3.3 -5.4 acetylornithine transaminase compare
SM_b21177 -3.3 -3.6 phosphate uptake ABC transporter ATP-binding protein compare
SMc00614 -3.3 -4.2 phosphoribosylglycinamide formyltransferase compare
SMc01842 -3.2 -2.4 methyltransferase transcription regulator protein compare
SMc01770 -3.2 -1.1 serine hydroxymethyltransferase compare
SMc00815 -3.2 -1.4 inosine 5'-monophosphate dehydrogenase compare
SMc04026 -3.2 -4.4 glutamate synthase compare
SMc00302 -3.2 -1.9 hypothetical protein compare
SMc02683 -3.2 -2.0 hypothetical protein compare
SMc00293 -3.2 -5.6 homoserine dehydrogenase compare
SMc00131 -3.1 -7.3 transcriptional regulator compare
SMc02521 -3.1 -3.1 glycerol-3-phosphate regulon repressor transcription regulator protein compare
SMc02425 -3.1 -3.6 transcriptional regulator compare
SMc00488 -3.1 -10.2 phosphoribosylformylglycinamidine synthase II compare
SMa0211 -3.0 -0.7 hypothetical protein compare
SMc02707 -3.0 -2.9 hypothetical protein compare
SMc00286 -3.0 -1.4 hemolysin-type calcium-binding protein compare
SMc02234 -2.9 -2.0 hypothetical protein compare
SMc02766 -2.9 -9.3 tryptophan synthase subunit beta compare
SM_b21400 -2.8 -1.8 hypothetical protein compare
SMc00914 -2.8 -3.6 oxidoreductase compare
SMc00987 -2.8 -2.1 hypothetical protein compare
SMc02144 -2.7 -4.0 phosphate ABC transporter permease compare
SMc02338 -2.7 -1.4 periplasmic binding ABC transporter protein compare
SMc01440 -2.7 -4.0 hydrolase serine protease transmembrane protein compare
SMc00615 -2.7 -5.9 phosphoribosylaminoimidazole synthetase compare
SMc01430 -2.7 -3.6 acetolactate synthase 3 regulatory subunit compare
SMc02725 -2.6 -6.3 anthranilate synthase compare
SMc04088 -2.6 -5.4 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
SMc01153 -2.6 -0.7 enoyl-CoA hydratase compare
SMc03229 -2.6 -1.4 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
SMc02147 -2.5 -4.5 phosphate regulon sensor histidine kinase transmembrane protein compare
SMc02909 -2.5 -1.4 transglycosylase transmembrane protein compare
SMc00012 -2.5 -1.3 cytochrome C oxidase assembly protein compare
SMc02765 -2.5 -6.5 tryptophan synthase subunit alpha compare
SMc00993 -2.5 -5.4 phosphoribosylamine--glycine ligase compare
SMa0955 -2.4 -1.1 GntR family transcriptional regulator compare
SMc02115 -2.4 -1.0 hypothetical protein compare
SMc02102 -2.4 -3.5 hypothetical protein compare
SM_b20701 -2.4 -0.8 hypothetical protein compare
SMc02980 -2.4 -1.0 hypothetical protein compare
SMc01361 -2.4 -2.8 dihydroorotase compare
SMa0112 -2.4 -2.8 hypothetical protein compare
SMc03978 -2.4 -3.1 transketolase compare
SMa0789 -2.3 -2.2 GntR family transcriptional regulator compare
SMa0992 -2.3 -1.7 hypothetical protein compare
SMc03068 -2.2 -6.0 phosphogluconate dehydratase compare
SMc00963 -2.2 -1.9 hypothetical protein compare
SMc01850 -2.2 -1.9 hypothetical protein compare
SMc01991 -2.2 -1.0 short chain dehydrogenase compare
SMc00554 -2.2 -5.4 amidophosphoribosyltransferase compare
SMc03979 -2.1 -1.2 glyceraldehyde-3-phosphate dehydrogenase compare
SMc02142 -2.1 -4.4 phosphate transporter ATP-binding protein compare
SMc02778 -2.1 -0.6 hydroxyacid aldolase compare
SM_b21123 -2.1 -2.9 translation initiation inhibitor compare
SMa0905 -2.1 -0.9 hypothetical protein compare
SM_b21173 -2.1 -1.4 hypothetical protein compare
SMc02858 -2.1 -0.8 chaperone protein DnaJ compare
SM_b20758 -2.0 -1.8 ArsR family transcriptional regulator compare
SMc01094 -2.0 -1.8 multidrug efflux system transmembrane protein compare
SMc00495 -2.0 -2.4 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
SMc00854 -2.0 -1.3 hypothetical protein compare
SMc03776 -2.0 -1.7 gamma-glutamyl kinase compare
SMc00404 -1.9 -0.6 hypothetical protein compare
SMc02685 -1.9 -2.0 hypothetical protein compare
SMa1118 -1.9 -1.5 HspC2 heat shock protein compare
SMc02844 -1.9 -1.0 transcriptional regulator compare
SMc02362 -1.8 -2.3 cytochrome c-type biogenesis protein CcmE compare
SMc00876 -1.8 -3.1 ATP-binding MRP protein compare
SMc00241 -1.8 -2.0 transcriptional regulator compare
SMc03127 -1.8 -1.2 ABC transporter permease compare
SMc00916 -1.8 -2.5 glutathione S-transferase compare
SMc03052 -1.7 -1.7 flagellar basal body rod modification protein compare
SMc02088 -1.7 -2.6 hypothetical protein compare
SMc03279 -1.7 -1.2 transposase number 2 for insertion sequence ISRM28 compare
SMc04348 -1.7 -1.7 transcriptional regulator compare
SMc02385 -1.7 -2.0 hypothetical protein compare
SMc02448 -1.7 -1.3 mutator protein 7,8-dihydro-8-oxoguanine-triphosphatase compare
SMc02140 -1.7 -1.1 phosphate regulon transcriptional regulatory protein compare
SMc00414 -1.7 -5.0 hypothetical protein compare
SMa0776 -1.7 -1.3 TRm23b IS ATP-binding protein compare
SMa1808 -1.7 -3.4 hypothetical protein compare
SMc00800 -1.7 -0.7 hypothetical protein compare
SMc03153 -1.7 -2.0 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase compare
SMc01258 -1.6 -3.2 hypothetical protein compare
SMc02121 -1.6 -0.8 ABC transporter for L-Glutamine, L-Histidine, and other L-amino acids, ATPase component (from data) compare
SMc01124 -1.6 -4.1 PII uridylyl-transferase compare
SMa0089 -1.6 -4.3 hypothetical protein compare
SMc03158 -1.6 -1.4 ABC transporter permease compare
SMa1158 -1.6 -1.5 hypothetical protein compare
SMa1056 -1.6 -1.4 transcriptional regulator compare
SMa1658 -1.6 -1.2 hypothetical protein compare
SMc02694 -1.5 -0.8 ATP-dependent Clp protease adaptor compare
SMc01495 -1.5 -2.0 transcriptional regulator compare
SMc03967 -1.5 -0.8 Holliday junction resolvase compare
SMc02856 -1.5 -4.5 penicillin-binding protein compare
SMc00067 -1.5 -3.2 outer-membranne lipoprotein compare
SMc00928 -1.5 -0.9 signal peptide protein compare
SM_b20360 -1.5 -2.6 hypothetical protein compare
SMc02169 -1.5 -1.0 ABC transporter ATP-binding protein compare
SM_b20703 -1.5 -2.1 hypothetical protein compare
SMc03773 -1.5 -1.8 hypothetical protein compare
SMc01518 -1.5 -1.9 hypothetical protein compare
SMc00619 -1.5 -1.2 hypothetical protein compare
SMc03184 -1.5 -0.8 PH adaptation potassium efflux system G transmembrane protein compare
SMc04456 -1.4 -2.8 chaperone protein compare
SMc00970 -1.4 -1.5 exodeoxyribonuclease VII small subunit compare
SMc02978 -1.4 -2.8 hypothetical protein compare
SMc02714 -1.4 -0.8 hypothetical protein compare
SMa0824 -1.4 -2.4 hypothetical protein compare
SMc03835 -1.4 -1.2 2'-5' RNA ligase compare
SMa1910 -1.4 -2.2 hypothetical protein compare
SMc02753 -1.4 -0.9 PTS system transporter subunit IIA compare
SMc02659 -1.4 -1.6 GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) protein compare
SMc01578 -1.4 -5.0 aspartate aminotransferase compare
SMc00053 -1.4 -0.6 monovalent cation/H+ antiporter subunit C compare
SMc00010 -1.4 -1.2 cytochrome C oxidase polypeptide I transmembrane protein compare
SM_b20904 -1.4 -1.2 sugar uptake ABC transporter ATP-binding protein compare


Specific Phenotypes

None in this experiment

For Sinorhizobium meliloti 1021 in nitrogen source experiments

For nitrogen source L-Asparagine across organisms