Experiment set3IT007 for Caulobacter crescentus NA1000

Compare to:

PYE with Carbenicillin disodium salt 0.1 mg/ml

200 most detrimental genes:

  gene name fitness t score description  
CCNA_01815 +3.3 23.9 nitrogen assimilation regulatory protein NtrC compare
CCNA_01814 +3.0 19.1 nitrogen regulation protein ntrB compare
CCNA_02026 +2.8 16.1 hypothetical protein compare
CCNA_01712 +2.8 23.9 CopY/TcrY family transcriptional repressor compare
CCNA_01730 +2.7 16.5 amidophosphoribosyltransferase compare
CCNA_02030 +2.6 15.8 hypothetical protein compare
CCNA_02000 +2.6 6.4 SSU ribosomal protein S2P compare
CCNA_01964 +2.5 11.8 NADH dehydrogenase compare
CCNA_02242 +2.4 17.5 PHB granule-associated protein, phasin2 compare
CCNA_01775 +2.4 9.1 phosphoribosylformylglycinamidine cyclo-ligase compare
CCNA_01059 +2.4 21.8 S-layer protein rsaA compare
CCNA_02957 +2.3 7.5 ArsR-family transcriptional regulator compare
CCNA_02103 +2.3 13.3 hypothetical protein compare
CCNA_01624 +2.3 7.1 orotate phosphoribosyltransferase compare
CCNA_02025 +2.3 12.2 hypothetical protein compare
CCNA_01094 +2.3 4.6 hypothetical protein compare
CCNA_01851 +2.3 17.0 quinol cytochrome oxidase polypeptide II compare
CCNA_00699 +2.3 13.7 LSU ribosomal protein L28P compare
CCNA_02416 +2.2 12.6 DNA-binding protein HU compare
CCNA_01058 +2.2 16.7 helix-turn-helix transcriptional regulator compare
CCNA_03287 +2.2 9.5 PadR-family transcriptional regulator compare
CCNA_00299 +2.2 14.9 phosphoribosylamine--glycine ligase compare
CCNA_R0037 +2.2 9.9 tRNA-Glu compare
CCNA_03498 +2.2 16.2 MarR-family transcriptional regulator compare
CCNA_01242 +2.1 15.4 amino acid permease compare
CCNA_03064 +2.1 13.6 PadR-family transcriptional regulator compare
CCNA_02419 +2.1 8.0 TonB1 protein compare
CCNA_03252 +2.1 16.4 CopY/TcrY-family transcriptional regulator compare
CCNA_03030 +2.1 13.4 cytochrome c2 compare
CCNA_00562 +2.1 15.6 dihydroorotate dehydrogenase compare
CCNA_01979 +2.1 11.1 LexA repressor compare
CCNA_03519 +2.1 7.7 PadR-family transcriptional regulator compare
CCNA_03043 +2.1 8.0 type IV pilin protein pilA compare
CCNA_00521 +2.1 4.7 antitoxin protein compare
CCNA_03612 +2.1 12.5 HTH XRE-family transcriptional regulator compare
CCNA_03012 +2.1 12.3 peroxiredoxin compare
CCNA_01526 +2.1 8.0 flagellar biosynthesis regulatory protein flaF compare
CCNA_00846 +2.1 17.5 proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase compare
CCNA_00013 +2.1 18.2 protein-PII uridylyltransferase compare
CCNA_03961 +2.0 13.8 hypothetical protein compare
CCNA_01453 +2.0 7.8 electron transport complex I subunit, NADH-ubiquinone oxidoreductase compare
CCNA_01361 +2.0 4.5 PepSY superfamily protein compare
CCNA_01850 +2.0 15.9 quinol cytochrome oxidase polypeptide I compare
CCNA_03289 +2.0 15.4 HicB-family RNA-binding protein compare
CCNA_00392 +2.0 14.7 dihydroorotase compare
CCNA_01774 +2.0 4.0 phosphoribosylglycinamide formyltransferase compare
CCNA_01848 +2.0 14.6 quinol cytochrome oxidase polypeptide IV compare
CCNA_02526 +2.0 15.3 dihydroorotase compare
CCNA_01801 +2.0 9.9 hypothetical protein compare
CCNA_02980 +2.0 13.3 tryptophan 2,3-dioxygenase compare
CCNA_03271 +2.0 13.2 methionine gamma-lyase compare
CCNA_01655 +1.9 11.1 cyclophilin-type peptidylprolyl cis-trans isomerase compare
CCNA_00518 +1.9 14.1 LSU ribosomal protein L25P compare
CCNA_03805 +1.9 13.6 PadR-family transcriptional regulator compare
CCNA_01840 +1.9 14.7 MerR-family transcriptional regulator compare
CCNA_02028 +1.9 2.5 NTF2 superfamily protein compare
CCNA_01790 +1.9 7.8 protein translocase subunit secG compare
CCNA_01849 +1.9 12.2 quinol cytochrome oxidase polypeptide III compare
CCNA_00161 +1.9 13.7 hypothetical protein compare
CCNA_00684 +1.8 8.9 anti-sigma factor, ChrR-family compare
CCNA_03858 +1.8 14.8 protein translocase subunit secB compare
CCNA_01931 +1.8 10.7 TetR-family transcriptional regulator compare
CCNA_00104 +1.8 12.9 orotidine 5'-phosphate decarboxylase compare
CCNA_03989 +1.8 13.0 MarR-family HTH transcriptional regulator / N-acyltransferase compare
CCNA_00505 +1.8 7.9 ubiquinol-cytochrome c reductase iron-sulfur subunit compare
CCNA_01573 +1.8 8.8 ArsR-family transcriptional regulator compare
CCNA_01295 +1.8 11.0 integral membrane protein compare
CCNA_03108 +1.8 13.7 TonB-dependent outer membrane receptor compare
CCNA_01923 +1.8 9.8 ATP-dependent RNA helicase compare
CCNA_01804 +1.8 11.9 glutathione peroxidase compare
CCNA_03281 +1.8 14.5 AsnC-family transcriptional regulator compare
CCNA_02525 +1.7 11.4 aspartate carbamoyltransferase compare
CCNA_02287 +1.7 9.7 TetR-family transcriptional regulator compare
CCNA_01593 +1.7 12.1 Xaa-pro aminopeptidase compare
CCNA_01802 +1.7 4.6 hypothetical protein compare
CCNA_02328 +1.7 1.5 cell cycle regulatory protein GcrA compare
CCNA_01525 +1.7 9.1 flagellar biosynthesis repressor flbT compare
CCNA_02021 +1.7 6.0 hypothetical protein compare
CCNA_02127 +1.7 11.6 oxacillin resistance-associated protein fmtC compare
CCNA_01415 +1.7 12.3 methyltransferase compare
CCNA_01678 +1.7 9.4 arginine N-succinyltransferase, beta chain compare
CCNA_01622 +1.7 5.4 Rsh ppGpp hydrolase-synthetase compare
CCNA_01684 +1.7 9.5 phenylalanine-4-hydroxylase compare
CCNA_00028 +1.7 8.2 TonB-dependent receptor compare
CCNA_03464 +1.7 7.0 glycine cleavage system H protein compare
CCNA_02180 +1.7 4.1 iron-sulfur cluster assembly/repair protein ApbC compare
CCNA_03123 +1.7 10.9 ArsR-family transcriptional regulator compare
CCNA_01186 +1.7 8.5 hypothetical protein compare
CCNA_02448 +1.7 10.1 hypothetical protein compare
CCNA_03420 +1.7 9.4 hypothetical protein compare
CCNA_03951 +1.7 6.9 hypothetical protein compare
CCNA_03325 +1.7 7.1 hypothetical protein compare
CCNA_01913 +1.7 10.9 MarR-family transcriptional regulator compare
CCNA_03936 +1.7 5.7 hypothetical protein compare
CCNA_03379 +1.6 3.8 Cro/CI family transcriptional regulator compare
CCNA_03129 +1.6 11.0 peptidoglycan-specific endopeptidase, M23 family compare
CCNA_03479 +1.6 9.0 MarR-family transcriptional regulator compare
CCNA_03893 +1.6 4.1 hypothetical protein compare
CCNA_00043 +1.6 6.0 N utilization substance protein A NusA compare
CCNA_02586 +1.6 11.2 phosphoribosylformylglycinamidine synthase II compare
CCNA_01235 +1.6 8.4 AcrR-family transcriptional regulator compare
CCNA_02316 +1.6 10.5 hypothetical protein compare
CCNA_01942 +1.6 7.9 Rrf2 family protein compare
CCNA_02387 +1.6 13.1 glutathione reductase compare
CCNA_01629 +1.6 9.7 signal peptidase I compare
CCNA_01968 +1.6 4.5 pentapeptide repeats containing protein compare
CCNA_01521 +1.6 10.6 hypothetical protein compare
CCNA_01826 +1.6 9.9 vitamin B12 receptor compare
CCNA_02004 +1.6 3.8 SOS-induced inhibitor of cell division SidA compare
CCNA_00947 +1.6 11.6 flagellar hook protein FlgE compare
CCNA_00447 +1.6 7.9 chemotaxis protein cheD compare
CCNA_02339 +1.6 9.6 methyltransferase compare
CCNA_02646 +1.6 3.4 cell division protein MraZ compare
CCNA_01763 +1.5 9.8 multifunctional aminopeptidase compare
CCNA_02330 +1.5 6.7 hypothetical protein compare
CCNA_02616 +1.5 9.9 4-hydroxyphenylpyruvate dioxygenase compare
CCNA_00962 +1.5 7.4 MarR-family transcriptional regulator compare
CCNA_03689 +1.5 11.2 alanine dehydrogenase compare
CCNA_02617 +1.5 11.3 histidinol-phosphate aminotransferase compare
CCNA_00769 +1.5 7.6 TetR family transcriptional regulator compare
CCNA_00781 +1.5 11.2 two-component receiver protein CpdR compare
CCNA_01780 +1.5 10.7 exopolyphosphatase compare
CCNA_00084 +1.5 10.9 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
CCNA_00032 +1.5 4.9 antitoxin protein VapB compare
CCNA_02289 +1.5 11.5 MarR/EmrR family transcriptional regulator compare
CCNA_01739 +1.5 7.6 LSU ribosomal protein L9P compare
CCNA_02341 +1.5 8.0 small heat shock protein compare
CCNA_01619 +1.5 8.2 NYN domain protein compare
CCNA_R0054 +1.5 3.6 tRNA-Gly compare
CCNA_01813 +1.4 7.6 tRNA-dihydrouridine synthase compare
CCNA_00027 +1.4 3.4 2OG-Fe(II) oxygenase compare
CCNA_01531 +1.4 10.2 acetyltransferase compare
CCNA_00375 +1.4 4.9 hypothetical protein compare
CCNA_02577 +1.4 3.7 phosphoribosylformylglycinamidine synthase, purS component compare
CCNA_00998 +1.4 7.3 ROS/MUCR transcriptional regulator compare
CCNA_01528 +1.4 8.6 flagellin fljK compare
CCNA_01959 +1.4 3.4 3-dehydroquinate dehydratase compare
CCNA_00944 +1.4 7.9 flagellar hook length determination protein compare
CCNA_01324 +1.4 7.4 LSU ribosomal protein L30P compare
CCNA_02732 +1.4 3.0 hypothetical protein compare
CCNA_02575 +1.4 3.6 hypothetical protein compare
CCNA_00752 +1.4 9.3 3-hydroxybutyryl-CoA dehydrogenase compare
CCNA_01742 +1.4 6.6 hypothetical protein compare
CCNA_01679 +1.4 8.2 succinylglutamic semialdehyde dehydrogenase compare
CCNA_02042 +1.4 8.9 trigger factor chaperone compare
CCNA_02447 +1.4 8.0 PspA/IM30 family regulatory protein compare
CCNA_00939 +1.4 5.5 MarR-family transcriptional regulator compare
CCNA_00919 +1.4 4.4 hypothetical protein compare
CCNA_00945 +1.4 7.6 chemotaxis protein MotD compare
CCNA_02243 +1.4 9.7 D-alanyl-D-alanine serine-type carboxypeptidase compare
CCNA_03863 +1.4 3.5 hypothetical protein compare
CCNA_03918 +1.4 2.1 hypothetical protein compare
CCNA_02475 +1.4 9.7 transcriptional regulator vanR compare
CCNA_03371 +1.3 6.8 bacterioferritin compare
CCNA_02591 +1.3 7.6 glutaredoxin compare
CCNA_02315 +1.3 4.0 Cro/CI-family transcriptional regulator compare
CCNA_03089 +1.3 7.2 hypothetical protein compare
CCNA_00756 +1.3 3.2 hypothetical protein compare
CCNA_00031 +1.3 7.3 toxin protein VapC compare
CCNA_00107 +1.3 4.1 Trm112p-like protein compare
CCNA_02728 +1.3 7.2 hypothetical protein compare
CCNA_03518 +1.3 10.0 cytochrome c oxidase polypeptide II coxB compare
CCNA_02379 +1.3 8.6 hypothetical protein compare
CCNA_03384 +1.3 3.2 LSU ribosomal protein L31P compare
CCNA_01580 +1.3 7.2 M15 superfamily membrane peptidase compare
CCNA_02619 +1.3 10.0 stomatin/prohibitin-related protein compare
CCNA_01060 +1.3 6.3 type I protein secretion ATP-binding protein RsaD compare
CCNA_00705 +1.3 4.4 hypothetical protein compare
CCNA_03557 +1.3 5.8 hypothetical protein compare
CCNA_02012 +1.3 7.6 metal-dependent hydrolase compare
CCNA_02156 +1.3 9.1 hypothetical protein compare
CCNA_00368 +1.3 9.0 phosphonates transport system permease protein phnE compare
CCNA_01541 +1.3 8.8 LysR-family transcriptional regulator compare
CCNA_02063 +1.3 5.1 beta-barrel assembly machine (BAM) protein BamD compare
CCNA_01008 +1.3 9.6 urocanate hydratase compare
CCNA_00999 +1.3 4.9 PAS-family motility and cell cycle regulatory protein MopJ compare
CCNA_00675 +1.3 6.5 VapC-like PIN domain ribonuclease compare
CCNA_00400 +1.3 6.7 MarR/EmrR-family transcriptional regulator compare
CCNA_02583 +1.3 4.9 phosphoribosylformylglycinamidine synthase I compare
CCNA_00443 +1.3 6.0 chemotaxis protein cheW compare
CCNA_02037 +1.3 6.9 ATP-dependent endopeptidase Lon compare
CCNA_02187 +1.3 5.4 adapter for ClpXP proteolysis of tmRNA-tagged proteins SspB compare
CCNA_01174 +1.3 7.7 LysR-family transcriptional regulator compare
CCNA_01578 +1.3 8.9 beta-lactamase repressor compare
CCNA_00803 +1.3 5.4 chemotaxis protein cheW compare
CCNA_01405 +1.3 4.0 GIY-YIG domain protein compare
CCNA_02910 +1.3 10.2 TonB-dependent receptor compare
CCNA_03688 +1.3 7.7 AsnC-family transcriptional regulator compare
CCNA_03215 +1.3 8.0 ARO8 family aminotransferase/HTH DNA-binding protein compare
CCNA_02297 +1.3 5.3 hypoxanthine-guanine phosphoribosyltransferase compare
CCNA_03391 +1.2 7.1 Cro/CI family transcriptional regulator compare
CCNA_00834 +1.2 6.5 flagellin FljM compare
CCNA_00441 +1.2 6.8 chemotaxis receiver domain protein cheYI compare
CCNA_00527 +1.2 7.3 hypothetical protein compare
CCNA_03400 +1.2 2.5 hypothetical protein compare
CCNA_02836 +1.2 5.7 hypothetical protein compare
CCNA_01086 +1.2 8.2 GTP-binding protein lepA compare
CCNA_00920 +1.2 3.9 hypothetical protein compare
CCNA_03635 +1.2 2.2 hypothetical protein compare
CCNA_01011 +1.2 6.5 imidazolonepropionase compare


Specific Phenotypes

For 3 genes in this experiment

For stress Carbenicillin disodium salt in Caulobacter crescentus NA1000

For stress Carbenicillin disodium salt across organisms