Experiment set3IT007 for Bacteroides thetaiotaomicron VPI-5482

Compare to:

(+)-Arabinogalactan carbon source

200 most important genes:

  gene name fitness t score description  
BT3757 -4.8 -4.7 pyrroline-5-carboxylate reductase (EC 1.5.1.2) (from data) compare
BT3933 -4.4 -7.3 prephenate dehydrogenase (EC 1.3.1.13) (from data) compare
BT3761 -4.3 -3.0 N-succinylglutamate synthase (from data) compare
BT3395 -4.2 -8.1 N-succinylglutamate kinase (EC 2.7.2.-) (from data) compare
BT1843 -4.1 -6.8 adenylosuccinate synthetase (NCBI ptt file) compare
BT2078 -4.1 -10.2 dihydroxy-acid dehydratase (NCBI ptt file) compare
BT1377 -4.0 -3.9 phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphohydrolase (NCBI ptt file) compare
BT3759 -4.0 -5.5 N-succinylglutamylphosphate reductase (EC 1.2.1.-) (from data) compare
BT1857 -3.9 -5.4 3-isopropylmalate dehydrogenase (NCBI ptt file) compare
BT2402 -3.9 -9.1 homoserine phosphotransferase HomK (from data) compare
BT2074 -3.9 -7.0 ketol-acid reductoisomerase (NCBI ptt file) compare
BT2837 -3.9 -12.2 2-oxoglutarate synthase subunit korB (NCBI ptt file) compare
BT2076 -3.9 -8.6 acetohydroxybutanoate synthase regulatory subunit (EC 2.2.1.6) (from data) compare
BT1379 -3.8 -2.6 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
BT3936 -3.8 -2.6 prephenate and/or arogenate dehydratase (EC 4.2.1.51) (from data) compare
BT3320 -3.7 -6.2 dihydrodipicolinate reductase (NCBI ptt file) compare
BT1607 -3.7 -4.4 methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase (NCBI ptt file) compare
BT2415 -3.7 -10.4 aspartate aminotransferase (NCBI ptt file) compare
BT3718 -3.7 -8.2 gamma-glutamyl phosphate reductase (NCBI ptt file) compare
BT3981 -3.6 -2.2 hypothetical protein (NCBI ptt file) compare
BT3733 -3.6 -10.3 arginosuccinate lyase (EC 4.3.2.1) (from data) compare
BT0202 -3.6 -2.5 histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) compare
BT3760 -3.5 -4.2 arginosuccinate synthetase (EC 6.3.4.5) (from data) compare
BT3164 -3.5 -8.7 quinolinate synthetase A (NCBI ptt file) compare
BT1374 -3.5 -4.8 diaminopimelate decarboxylase (EC 4.1.1.20) (from data) compare
BT0892 -3.5 -1.8 dihydroorotate dehydrogenase (NCBI ptt file) compare
BT3549 -3.5 -4.1 N-succinylcitrulline desuccinylase (EC 3.5.1.-) (from data) compare
BT0528 -3.5 -4.1 phosphoribosylanthranilate isomerase (EC 5.3.1.24) (from data) compare
BT2836 -3.4 -15.9 2-oxoglutarate synthase subunit korA (NCBI ptt file) compare
BT2401 -3.4 -8.2 threonine synthase (NCBI ptt file) compare
BT3717 -3.3 -3.2 N-succinylornithine carbamoyltransferase (EC 2.1.3.11) (from data) compare
BT0530 -3.3 -3.2 anthranilate phosphoribosyltransferase (EC 2.4.2.18) (from data) compare
BT1858 -3.3 -4.5 (R)-citramalate synthase (EC 2.3.1.182) (from data) compare
BT2403 -3.2 -10.0 aspartate kinase / homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) (from data) compare
BT0274 -3.2 -3.1 hypothetical protein (NCBI ptt file) compare
BT0738 -3.2 -2.2 serine hydroxymethyltransferase (NCBI ptt file) compare
BT3184 -3.2 -15.6 L-aspartate oxidase (NCBI ptt file) compare
BT1378 -3.1 -2.2 imidazole glycerol phosphate synthase subunit hisF (NCBI ptt file) compare
BT3361 -3.1 -6.7 erythronate-4-phosphate dehydrogenase (NCBI ptt file) compare
BT3758 -3.1 -3.0 N-succinylornithine aminotransferase (EC 2.6.1.81) (from data) compare
BT3719 -3.1 -4.7 glutamate 5-kinase (EC 2.7.2.11) (from data) compare
BT4206 -3.1 -1.9 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (NCBI ptt file) compare
BT1860 -3.0 -2.9 3-isopropylmalate dehydratase large subunit (NCBI ptt file) compare
BT0288 -3.0 -5.4 conserved hypothetical protein (NCBI ptt file) compare
BT0201 -3.0 -2.1 histidinol dehydrogenase (NCBI ptt file) compare
BT2077 -2.9 -6.3 acetolactate synthase large subunit (NCBI ptt file) compare
BT2129 -2.9 -4.5 aspartate--ammonia ligase (NCBI ptt file) compare
BT0200 -2.9 -2.0 ATP phosphoribosyltransferase (NCBI ptt file) compare
BT4191 -2.9 -9.1 hypothetical protein (NCBI ptt file) compare
BT1381 -2.9 -4.8 formyltetrahydrofolate deformylase (NCBI ptt file) compare
BT1375 -2.9 -8.8 aspartokinase (NCBI ptt file) compare
BT1747 -2.8 -2.8 pyruvate-flavodoxin oxidoreductase (NCBI ptt file) compare
BT0203 -2.8 -2.0 histidine biosynthesis bifunctional protein hisB (NCBI ptt file) compare
BT0231 -2.8 -1.9 excisionase (NCBI ptt file) compare
BT0285 -2.8 -4.3 putative tolQ-type transport protein (NCBI ptt file) compare
BT1152 -2.8 -3.3 D-3-phosphoglycerate dehydrogenase (NCBI ptt file) compare
BT1859 -2.8 -3.3 3-isopropylmalate dehydratase small subunit (NCBI ptt file) compare
BT3919 -2.8 -2.7 putative biopolymer transport protein (NCBI ptt file) compare
BT0429 -2.8 -2.7 indolepyruvate oxidoreductase subunit iorB (NCBI ptt file) compare
BT0532 -2.7 -4.9 anthranilate synthase component I (NCBI ptt file) compare
BT4733 -2.7 -1.6 conserved hypothetical protein (NCBI ptt file) compare
BT4699 -2.7 -1.9 putative hydrolase, haloacid dehalogenase-like hydrolase (NCBI ptt file) compare
BT3022 -2.7 -1.9 hypothetical protein (NCBI ptt file) compare
BT_2008 -2.7 -2.0 hypothetical protein (RefSeq) compare
BT0527 -2.7 -3.6 tryptophan synthase alpha chain (NCBI ptt file) compare
BT3912 -2.7 -2.6 conserved hypothetical protein (NCBI ptt file) compare
BT1861 -2.6 -6.6 2-isopropylmalate synthase (EC 2.3.3.13) (from data) compare
BT3253 -2.6 -2.5 phosphoribosylamine--glycine ligase (NCBI ptt file) compare
BT0370 -2.6 -1.8 galactokinase (NCBI ptt file) compare
BT0533 -2.6 -1.8 tryptophan synthase beta chain (NCBI ptt file) compare
BT1970 -2.6 -8.6 glutamate dehydrogenase (NCBI ptt file) compare
BT1380 -2.6 -2.5 imidazole glycerol phosphate synthase subunit hisH (NCBI ptt file) compare
BT1153 -2.6 -6.0 phosphoserine aminotransferase (NCBI ptt file) compare
BT2080 -2.6 -3.5 L-cysteine desulfidase cdsB (from data) compare
BT4193 -2.5 -7.6 dipeptidyl peptidase IV (NCBI ptt file) compare
BT3935 -2.5 -4.1 aminotransferase (NCBI ptt file) compare
BT1608 -2.5 -6.7 capsule biosynthesis protein capA (NCBI ptt file) compare
BT1058 -2.4 -11.4 two-component system sensor histidine kinase (NCBI ptt file) compare
BT3193 -2.4 -11.7 putative coenzyme A transferase (NCBI ptt file) compare
BT0269 -2.4 -4.0 putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) compare
BT0278 -2.4 -11.2 conserved hypothetical protein (NCBI ptt file) compare
BT0844 -2.4 -1.4 hypothetical protein (NCBI ptt file) compare
BT0277 -2.3 -4.9 conserved hypothetical protein (NCBI ptt file) compare
BT0529 -2.3 -2.2 indole-3-glycerol phosphate synthase (NCBI ptt file) compare
BT0972 -2.3 -2.2 putative oxidoreductase (NCBI ptt file) compare
BT0275 -2.3 -6.1 hypothetical protein (NCBI ptt file) compare
BT1222 -2.3 -1.6 6-phosphogluconate dehydrogenase,decarboxylating (NCBI ptt file) compare
BT0270 -2.3 -4.4 hypothetical protein (NCBI ptt file) compare
BT1733 -2.3 -3.1 putative phosphoribosylformylglycinamidine synthase (NCBI ptt file) compare
BT1202 -2.3 -1.7 UDP-N-acetylglucosamine 2-epimerase (NCBI ptt file) compare
BT4557 -2.2 -5.6 hypothetical protein (NCBI ptt file) compare
BT1221 -2.2 -2.6 glucose-6-phosphate 1-dehydrogenase (NCBI ptt file) compare
BT1376 -2.2 -3.2 putative ATP-binding protein involved in cell division (NCBI ptt file) compare
BT0272 -2.2 -9.8 TonB-dependent receptor for (+)-arabinogalactan (SusC-like) (from data) compare
BT0273 -2.2 -4.4 Outer membrane binding protein for (+)-arabinogalactan (SusD-like) (from data) compare
BT3197 -2.2 -1.6 hypothetical protein (NCBI ptt file) compare
BT3918 -2.1 -3.7 pyridoxal phosphate biosynthetic protein pdxJ (NCBI ptt file) compare
BT2760 -2.1 -3.8 conserved hypothetical protein (NCBI ptt file) compare
BT4646 -2.1 -1.4 conserved hypothetical protein (NCBI ptt file) compare
BT1445 -2.0 -3.9 putative biotin synthesis protein bioC (NCBI ptt file) compare
BT2358 -2.0 -2.7 hypothetical protein (NCBI ptt file) compare
BT0268 -2.0 -7.4 putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) compare
BT3342 -2.0 -2.4 hypothetical protein (NCBI ptt file) compare
BT2932 -2.0 -1.9 transcriptional regulator (NCBI ptt file) compare
BT2003 -1.9 -1.1 putative membrane peptidase (NCBI ptt file) compare
BT4339 -1.9 -2.3 glutamine synthetase (NCBI ptt file) compare
BT4249 -1.9 -1.2 hypothetical protein (NCBI ptt file) compare
BT0790 -1.9 -2.9 phosphomethylpyrimidine kinase (NCBI ptt file) compare
BT1476 -1.9 -3.2 aspartate aminotransferase (NCBI ptt file) compare
BT3394 -1.9 -6.9 putative arginine decarboxylase (NCBI ptt file) compare
BT1443 -1.9 -4.7 8-amino-7-oxononanoate synthase (NCBI ptt file) compare
BT2844 -1.9 -5.3 conserved hypothetical protein (NCBI ptt file) compare
BT1444 -1.9 -2.6 conserved hypothetical protein (NCBI ptt file) compare
BT1446 -1.9 -6.1 dethiobiotin synthetase (NCBI ptt file) compare
BT1976 -1.9 -1.6 hypothetical protein (NCBI ptt file) compare
BT0327 -1.9 -2.2 glutamine ABC transporter, periplasmic glutamine-binding protein (glnH) (NCBI ptt file) compare
BT2843 -1.9 -2.8 integrase (NCBI ptt file) compare
BT4061 -1.9 -2.4 NADH dehydrogenase I, chain K (NCBI ptt file) compare
BT0833 -1.8 -1.9 conserved hypothetical protein (NCBI ptt file) compare
BT0276 -1.8 -5.6 hypothetical protein (NCBI ptt file) compare
BT3921 -1.8 -3.5 hypothetical protein (NCBI ptt file) compare
BT0967 -1.8 -1.3 hypothetical protein (NCBI ptt file) compare
BT0922 -1.8 -3.3 hypothetical protein (NCBI ptt file) compare
BT0891 -1.8 -2.1 dihydroorotate dehydrogenase electron transfer subunit (NCBI ptt file) compare
BT0869 -1.8 -2.0 hypothetical protein (NCBI ptt file) compare
BT4211 -1.8 -2.6 putative phosphoribosylformylglycinamidine cyclo-ligase (NCBI ptt file) compare
BT3920 -1.8 -1.0 conserved hypothetical protein (NCBI ptt file) compare
BT2817 -1.7 -9.0 putative TonB-dependent receptor (NCBI ptt file) compare
BT1220 -1.7 -1.7 6-phosphogluconolactonase (NCBI ptt file) compare
BT0531 -1.7 -2.0 anthranilate synthase component II (NCBI ptt file) compare
BT1746 -1.7 -1.2 conserved hypothetical protein (NCBI ptt file) compare
BT1894 -1.7 -5.6 TPR-repeat-containing proteins (NCBI ptt file) compare
BT4551 -1.7 -2.0 putative GTPase, ThdF family (NCBI ptt file) compare
BT4561 -1.7 -4.0 conserved hypothetical protein, putative integral membrane protein (NCBI ptt file) compare
BT0651 -1.7 -2.2 thiamine biosynthesis protein ThiG (NCBI ptt file) compare
BT0838 -1.7 -2.7 putative RNA methyltransferase (NCBI ptt file) compare
BT1232 -1.7 -1.5 hypothetical protein (NCBI ptt file) compare
BT3182 -1.7 -6.8 rubrerythrin (NCBI ptt file) compare
BT4322 -1.7 -1.9 conserved hypothetical protein, with a diacylglycerol kinase catalytic domain (NCBI ptt file) compare
BT1944 -1.6 -2.2 putative transposase (NCBI ptt file) compare
BT1806 -1.6 -4.8 acyl-CoA dehydrogenase (NCBI ptt file) compare
BT0876 -1.6 -1.4 conserved hypothetical protein (NCBI ptt file) compare
BT2281 -1.6 -1.6 hypothetical protein (NCBI ptt file) compare
BT0700 -1.6 -4.3 GTP pyrophosphokinase (NCBI ptt file) compare
BT1270 -1.6 -4.7 putative Na+/H+ antiporter (NCBI ptt file) compare
BT3727 -1.6 -5.2 hypothetical protein (NCBI ptt file) compare
BT1526 -1.6 -3.2 myo-inositol-1-phosphate synthase (NCBI ptt file) compare
BT0585 -1.6 -1.3 conserved hypothetical protein (NCBI ptt file) compare
BT3443 -1.6 -3.9 conserved hypothetical protein with a conserved domain (NCBI ptt file) compare
BT2445 -1.6 -3.2 hypothetical protein (NCBI ptt file) compare
BT1442 -1.6 -4.3 adenosylmethionine-8-amino-7-oxononanoate aminotransferase (NCBI ptt file) compare
BT1849 -1.6 -1.9 hypothetical protein (NCBI ptt file) compare
BT0271 -1.6 -3.5 hypothetical protein (NCBI ptt file) compare
BT0074 -1.6 -2.0 hypothetical protein (NCBI ptt file) compare
BT3883 -1.6 -1.7 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase (NCBI ptt file) compare
BT2344 -1.6 -1.5 hypothetical protein (NCBI ptt file) compare
BT0639 -1.6 -1.8 conserved hypothetical protein (NCBI ptt file) compare
BT1698 -1.5 -1.5 conserved hypothetical protein (NCBI ptt file) compare
BT1804 -1.5 -2.9 electron transfer flavoprotein beta-subunit (NCBI ptt file) compare
BT1363 -1.5 -1.8 DNA Pol III Epsilon Chain (NCBI ptt file) compare
BT0851 -1.5 -2.8 hypothetical protein (NCBI ptt file) compare
BT3866 -1.5 -9.0 ammonium-dependent carbamoyl phosphate synthetase CarB2 (EC 6.3.4.16) (from data) compare
BT1329 -1.5 -2.1 putative thiol peroxidase (NCBI ptt file) compare
BT0878 -1.5 -1.0 ABC transporter, ATP-binding protein (NCBI ptt file) compare
BT4382 -1.5 -2.9 hypothetical protein (NCBI ptt file) compare
BT3122 -1.5 -6.2 transcriptional regulator (NCBI ptt file) compare
BT0322 -1.4 -2.6 putative oxidoreductase (NCBI ptt file) compare
BT3746 -1.4 -4.8 hypothetical protein (NCBI ptt file) compare
BT1576 -1.4 -1.6 conserved hypothetical protein, with a conserved domain (NCBI ptt file) compare
BT2816 -1.4 -10.0 TPR-domain containing protein (NCBI ptt file) compare
BT4723 -1.4 -2.1 putative anti-sigma factor (NCBI ptt file) compare
BT1561 -1.4 -1.0 hypothetical protein (NCBI ptt file) compare
BT3845 -1.4 -1.8 inosine-5'-monophosphate dehydrogenase (NCBI ptt file) compare
BT3373 -1.4 -3.1 spermidine n1-acetyltransferase (NCBI ptt file) compare
BT2446 -1.4 -3.5 integrase (NCBI ptt file) compare
BT3840 -1.4 -2.8 putative RNA-binding protein rbpA (NCBI ptt file) compare
p5482_02 -1.4 -3.0 hypothetical protein (NCBI) compare
BT3191 -1.4 -2.7 hypothetical protein (NCBI ptt file) compare
BT0938 -1.3 -2.8 hypothetical protein (NCBI ptt file) compare
BT3978 -1.3 -4.1 putative cardiolipin synthetase (NCBI ptt file) compare
BT1851 -1.3 -2.2 TPR-repeat-containing protein (NCBI ptt file) compare
BT1322 -1.3 -2.9 putative ABC transporter permease protein (NCBI ptt file) compare
BT2546 -1.3 -4.0 transcriptional regulator (NCBI ptt file) compare
BT4002 -1.3 -1.0 ATPase, ParA family (NCBI ptt file) compare
BT3973 -1.3 -2.3 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (NCBI ptt file) compare
BT3762 -1.3 -2.8 arginine repressor, transcriptional regulator of arginine metabolism (NCBI ptt file) compare
BT0427 -1.3 -1.1 xanthine phosphoribosyltransferase (NCBI ptt file) compare
BT2798 -1.3 -8.2 carboxy-terminal processing protease precursor (NCBI ptt file) compare
BT1262 -1.3 -1.3 putative transcriptional regulator (NCBI ptt file) compare
BT1613 -1.3 -4.7 conserved hypothetical protein (NCBI ptt file) compare
BT0118 -1.3 -3.8 putative cytochrome c biogenesis protein (NCBI ptt file) compare
BT0286 -1.3 -2.2 hypothetical protein (NCBI ptt file) compare
BT0902 -1.3 -1.4 hypothetical protein (NCBI ptt file) compare
BT0409 -1.3 -1.7 putative short-chain dehydrogenase (NCBI ptt file) compare
BT1312 -1.3 -2.9 serine protease precursor (NCBI ptt file) compare
BT1059 -1.3 -3.4 putative UDP-glucose 4-epimerase (NCBI ptt file) compare
BT0321 -1.3 -2.0 cytidine/deoxycytidylate deaminase (NCBI ptt file) compare
BT2093 -1.3 -2.0 hypothetical protein (NCBI ptt file) compare
BT4570 -1.3 -3.1 hypothetical protein (NCBI ptt file) compare
BT0758 -1.2 -1.1 acetyltransferase (NCBI ptt file) compare


Specific Phenotypes

For 13 genes in this experiment

For carbon source (+)-Arabinogalactan in Bacteroides thetaiotaomicron VPI-5482

For carbon source (+)-Arabinogalactan across organisms