Experiment set3IT006 for Rhodospirillum rubrum S1H

Compare to:

Hexanoic acid 21 mM; anaerobic

200 most important genes:

  gene name fitness t score description  
Rru_A2771 -4.3 -6.7 Histidinol dehydrogenase (NCBI) compare
Rru_A2952 -3.7 -4.1 Methyltransferase small (NCBI) compare
Rru_A0058 -3.7 -1.0 Dihydrokaempferol 4-reductase (NCBI) compare
Rru_A2886 -3.4 -23.1 Carbamoyl-phosphate synthase, large subunit, glutamine-dependent (NCBI) compare
Rru_B0005 -3.3 -1.5 Glycosyl transferase (NCBI) compare
Rru_A1890 -3.3 -2.9 hypothetical protein (NCBI) compare
Rru_A1767 -3.2 -2.5 peptidase M23B (NCBI) compare
Rru_A1620 -3.2 -1.1 hypothetical protein (NCBI) compare
Rru_A1894 -3.1 -8.0 heavy metal translocating P-type ATPase (NCBI) compare
Rru_A1105 -3.1 -5.9 tRNA synthetase, class II (G, H, P and S) (NCBI) compare
Rru_A2902 -3.1 -1.0 hypothetical protein (NCBI) compare
Rru_A0574 -2.9 -2.5 Carboxylyase-related protein (NCBI) compare
Rru_A3642 -2.9 -1.0 Negative regulator of class I heat shock protein (NCBI) compare
Rru_A2029 -2.9 -1.1 Serine O-acetyltransferase (NCBI) compare
Rru_A3276 -2.8 -5.2 Ornithine carbamoyltransferase (NCBI) compare
Rru_A1827 -2.8 -12.7 Glycine hydroxymethyltransferase (NCBI) compare
Rru_A1775 -2.8 -2.3 chromosome segregation and condensation protein ScpA (NCBI) compare
Rru_A0397 -2.8 -6.3 Argininosuccinate lyase (NCBI) compare
Rru_A0468 -2.8 -5.1 Acetolactate synthase, small subunit (NCBI) compare
Rru_A0615 -2.8 -3.0 photosynthetic complex assembly protein (NCBI) compare
Rru_A3264 -2.8 -8.1 Histidinol-phosphate aminotransferase (NCBI) compare
Rru_A3751 -2.7 -11.0 Argininosuccinate synthase (NCBI) compare
Rru_A1837 -2.7 -3.9 Porphobilinogen synthase (NCBI) compare
Rru_A0619 -2.7 -2.0 Magnesium protoporphyrin O-methyltransferase (NCBI) compare
Rru_A1895 -2.7 -2.3 Glutamine amidotransferase of anthranilate synthase (NCBI) compare
Rru_A1190 -2.7 -1.8 3-isopropylmalate dehydratase small subunit region (NCBI) compare
Rru_A3594 -2.6 -2.4 Histidine biosynthesis protein HisF (NCBI) compare
Rru_A3547 -2.6 -5.8 hypothetical protein (NCBI) compare
Rru_A3165 -2.6 -8.2 Histidinol-phosphate phosphatase, putative, inositol monophosphatase (NCBI) compare
Rru_A3266 -2.6 -10.8 Homoserine O-acetyltransferase (NCBI) compare
Rru_A1191 -2.6 -13.2 3-isopropylmalate dehydrogenase (NCBI) compare
Rru_A3395 -2.6 -17.8 Transcriptional Regulator, LuxR family (NCBI) compare
Rru_A2983 -2.6 -1.2 Polyprenyl synthetase (NCBI) compare
Rru_A3428 -2.6 -11.9 Tryptophan synthase (NCBI) compare
Rru_A2979 -2.5 -5.8 Chlorophyllide reductase subunit Y (NCBI) compare
Rru_A3227 -2.5 -9.3 conserved hypothetical protein, potential methyltransferase (NCBI) compare
Rru_A2421 -2.5 -8.3 N-acetyl-gamma-glutamyl-phosphate reductase (NCBI) compare
Rru_A3277 -2.5 -5.9 Acetylornithine and succinylornithine aminotransferase (NCBI) compare
Rru_A2975 -2.5 -12.3 Photosynthetic reaction centre protein L subunit (NCBI) compare
Rru_A1897 -2.5 -5.1 Indole-3-glycerol-phosphate synthase (NCBI) compare
Rru_A3380 -2.5 -2.0 hypothetical protein (NCBI) compare
Rru_A2200 -2.5 -3.2 DNA polymerase III chi subunit, HolC (NCBI) compare
Rru_A2980 -2.5 -9.7 Chlorophyllide reductase iron protein subunit X (NCBI) compare
Rru_A0467 -2.5 -14.3 Acetolactate synthase, large subunit, biosynthetic type (NCBI) compare
Rru_A3162 -2.5 -13.4 Prephenate dehydratase (NCBI) compare
Rru_A1201 -2.4 -13.4 MaoC-like dehydratase (NCBI) compare
Rru_A0485 -2.4 -6.3 Magnesium chelatase ATPase subunit I (NCBI) compare
Rru_A3398 -2.4 -2.2 Transcriptional Regulator, XRE family (NCBI) compare
Rru_A0627 -2.4 -7.2 Bacteriochlorophyll/chlorophyll synthetase (NCBI) compare
Rru_A2981 -2.4 -4.9 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide (NCBI) compare
Rru_A0394 -2.4 -3.9 Amino-acid N-acetyltransferase (NCBI) compare
Rru_A0217 -2.4 -11.5 Citrate lyase (NCBI) compare
Rru_A2182 -2.4 -3.2 NAD(P)(+) transhydrogenase (AB-specific) (NCBI) compare
Rru_A2525 -2.4 -10.1 Peptidase U32 (NCBI) compare
Rru_A0469 -2.4 -10.8 Ketol-acid reductoisomerase (NCBI) compare
Rru_A1021 -2.4 -2.6 Sigma 32 (RpoH) (NCBI) compare
Rru_A1786 -2.4 -14.0 Dihydroxy-acid dehydratase (NCBI) compare
Rru_A0617 -2.3 -5.0 Photosynthetic reaction center, H-chain (NCBI) compare
Rru_A0181 -2.3 -3.7 hypothetical protein (NCBI) compare
Rru_A2100 -2.3 -5.4 Protein of unknown function DUF81 (NCBI) compare
Rru_A2974 -2.3 -7.9 Photosynthetic reaction centre M subunit (NCBI) compare
Rru_A3396 -2.3 -8.7 Autoinducer synthesis protein (NCBI) compare
Rru_A1896 -2.3 -9.8 Anthranilate phosphoribosyl transferase (NCBI) compare
Rru_A1189 -2.3 -11.3 3-isopropylmalate dehydratase large subunit region (NCBI) compare
Rru_A2008 -2.3 -14.4 Thiamine biosynthesis protein ThiC (NCBI) compare
Rru_A3267 -2.3 -5.9 Methionine biosynthesis MetW (NCBI) compare
Rru_A3425 -2.3 -8.6 Phosphoribosylanthranilate isomerase (NCBI) compare
Rru_B0049 -2.3 -2.5 dTDP-4-dehydrorhamnose reductase (NCBI) compare
Rru_A2770 -2.2 -1.6 Uncharacterized conserved protein UCP032146 (NCBI) compare
Rru_A0486 -2.2 -10.3 von Willebrand factor, type A (NCBI) compare
Rru_A1309 -2.2 -9.3 acetoacetyl-CoA reductase (NCBI) compare
Rru_A0621 -2.2 -12.1 Magnesium-chelatase, subunit H (NCBI) compare
Rru_A1048 -2.2 -3.9 Protein of unknown function DUF465 (NCBI) compare
Rru_A0616 -2.2 -7.8 photosynthetic complex assembly protein (NCBI) compare
Rru_A1200 -2.2 -6.1 Citrate lyase (NCBI) compare
Rru_A0618 -2.1 -8.8 PUCC protein (NCBI) compare
Rru_A3285 -2.1 -2.3 Response regulator receiver domain protein (CheY) (NCBI) compare
Rru_A1348 -2.1 -3.5 Protein of unknown function DUF81 (NCBI) compare
Rru_A2524 -2.1 -8.5 Peptidase U32 (NCBI) compare
Rru_A3548 -2.1 -9.1 Magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase (NCBI) compare
Rru_A0752 -2.1 -1.5 hypothetical protein (NCBI) compare
Rru_A1865 -2.1 -6.0 Dihydrodipicolinate synthase subfamily (NCBI) compare
Rru_A3766 -2.1 -3.9 Transcriptional Regulator, MucR family (NCBI) compare
Rru_A0206 -2.1 -1.8 Cobalt chelatase, pCobS small subunit (NCBI) compare
Rru_A0614 -2.0 -9.2 hypothetical protein (NCBI) compare
Rru_A2115 -2.0 -5.4 Phosphoglucomutase/phosphomannomutase (NCBI) compare
Rru_A3427 -2.0 -12.0 Tryptophan synthase, beta chain (NCBI) compare
Rru_A1928 -2.0 -10.0 Yeast 2-isopropylmalate synthase (NCBI) compare
Rru_A0265 -2.0 -3.4 Electron-transferring-flavoproteindehydrogenase (NCBI) compare
Rru_A1530 -2.0 -11.3 5,10-methylenetetrahydrofolate reductase (NCBI) compare
Rru_A2956 -2.0 -12.1 Pyruvate, phosphate dikinase (NCBI) compare
Rru_A0620 -2.0 -5.2 Light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein (NCBI) compare
Rru_A1572 -2.0 -3.2 Glyoxalase/bleomycin resistance protein/dioxygenase (NCBI) compare
Rru_A0296 -2.0 -1.5 hypothetical protein (NCBI) compare
Rru_A2772 -2.0 -2.5 ATP phosphoribosyltransferase (NCBI) compare
Rru_A3539 -2.0 -7.4 GlnB (protein PII) uridylyltransferase, GlnD (NCBI) compare
Rru_A3010 -2.0 -4.1 Transcriptional Regulator, DeoR family (NCBI) compare
Rru_A3062 -1.9 -13.1 Methylmalonyl-CoA mutase-like (NCBI) compare
Rru_A2049 -1.9 -5.7 Transcriptional Regulator, TetR family (NCBI) compare
Rru_A2549 -1.9 -7.1 HAD-superfamily hydrolase subfamily IIB (NCBI) compare
Rru_A2167 -1.9 -6.7 Phosphoribosylformylglycinamidine cyclo-ligase (NCBI) compare
Rru_A3397 -1.9 -2.3 hypothetical protein (NCBI) compare
Rru_A2978 -1.9 -6.7 Chlorophyllide reductase subunit Z (NCBI) compare
Rru_A0622 -1.8 -6.6 Light-independent protochlorophyllide reductase, B subunit (NCBI) compare
Rru_A3341 -1.8 -2.8 Acetylglutamate kinase (NCBI) compare
Rru_A3527 -1.8 -4.4 Protein of unknown function YGGT (NCBI) compare
Rru_A3558 -1.8 -1.3 Protein of unknown function UPF0005 (NCBI) compare
Rru_A2181 -1.8 -9.9 NAD(P) transhydrogenase, beta subunit (NCBI) compare
Rru_A0435 -1.8 -12.4 Acyl-CoA dehydrogenase (NCBI) compare
Rru_A3206 -1.7 -5.3 Response regulator receiver domain protein (CheY) (NCBI) compare
Rru_A2183 -1.7 -4.5 NAD(P)(+) transhydrogenase (AB-specific) (NCBI) compare
Rru_A1308 -1.7 -11.1 Acyl-CoA dehydrogenase (NCBI) compare
Rru_A0159 -1.7 -2.8 Exodeoxyribonuclease VII (NCBI) compare
Rru_A3704 -1.7 -4.9 Periplasmic solute binding protein (NCBI) compare
Rru_A0023 -1.7 -2.7 hypothetical protein (NCBI) compare
Rru_A2935 -1.7 -4.9 PAS/PAC Sensor Hybrid Histidine Kinase (NCBI) compare
Rru_A2370 -1.7 -1.6 GCN5-related N-acetyltransferase (NCBI) compare
Rru_A0155 -1.7 -3.0 Transcriptional Regulator, TetR family (NCBI) compare
Rru_A0493 -1.7 -7.7 Phytoene desaturase (NCBI) compare
Rru_A3770 -1.7 -4.9 tRNA-i(6)A37 modification enzyme MiaB (NCBI) compare
Rru_A0404 -1.7 -12.1 Amidophosphoribosyl transferase (NCBI) compare
Rru_A3445 -1.7 -11.1 Phosphoenolpyruvate-protein phosphotransferase (NCBI) compare
Rru_A3064 -1.7 -9.5 Isovaleryl-CoA dehydrogenase (NCBI) compare
Rru_A2440 -1.7 -2.8 NADH:ubiquinone oxidoreductase 17.2 kD subunit (NCBI) compare
Rru_A2354 -1.7 -5.4 adenylate cyclase (NCBI) compare
Rru_A2038 -1.7 -6.3 Glutamate-ammonia-ligase adenylyltransferase (NCBI) compare
Rru_A0624 -1.7 -7.6 2-vinyl bacteriochlorophyllide hydratase (NCBI) compare
Rru_A3202 -1.6 -4.9 DNA topoisomerase (NCBI) compare
Rru_A1691 -1.6 -5.4 Spermine synthase (NCBI) compare
Rru_A2363 -1.6 -6.1 Endonuclease/exonuclease/phosphatase (NCBI) compare
Rru_A3797 -1.6 -4.2 2-polyprenylphenol 6-hydroxylase (NCBI) compare
Rru_A0596 -1.6 -3.8 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype (NCBI) compare
Rru_A0770 -1.6 -4.3 Peptidase M23B (NCBI) compare
Rru_A1310 -1.6 -6.2 Acetyl-CoA C-acyltransferase (NCBI) compare
Rru_A2025 -1.5 -5.2 Transcriptional activator, TenA family (NCBI) compare
Rru_A2099 -1.5 -7.7 surface antigen (NCBI) compare
Rru_A2897 -1.5 -3.5 Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (NCBI) compare
Rru_A0613 -1.5 -2.4 Bacteriochlorophyll 4-vinyl reductase (NCBI) compare
Rru_A2427 -1.5 -3.3 LrgB-like protein (NCBI) compare
Rru_A0399 -1.5 -0.7 Phosphoesterase, PA-phosphatase related (NCBI) compare
Rru_A2497 -1.5 -4.7 Peptide chain release factor 3 (NCBI) compare
Rru_A1867 -1.4 -1.3 Protein of unknown function DUF583 (NCBI) compare
Rru_A3748 -1.4 -2.8 hypothetical protein (NCBI) compare
Rru_A1804 -1.4 -4.5 N-acetyltransferase (NCBI) compare
Rru_A2398 -1.4 -9.0 Pyruvate-ferredoxin (flavodoxin) oxidoreductase (NCBI) compare
Rru_A2246 -1.4 -9.6 Glucose-1-phosphate adenylyltransferase (NCBI) compare
Rru_A1898 -1.4 -2.0 SOS-response transcriptional repressor, LexA (NCBI) compare
Rru_A0360 -1.4 -5.3 Initiation factor 2B alpha/beta/delta (NCBI) compare
Rru_A2486 -1.4 -4.7 Glucokinase (NCBI) compare
Rru_A0086 -1.4 -1.7 Protein of unknown function DUF188 (NCBI) compare
Rru_A2411 -1.4 -5.9 Aminotransferase, class I and II (NCBI) compare
Rru_A3009 -1.4 -3.0 Aminotransferase class-III (NCBI) compare
Rru_A0270 -1.4 -6.2 Protein of unknown function DUF525 (NCBI) compare
Rru_A2885 -1.4 -4.7 Carbamoyl-phosphate synthase, small subunit (NCBI) compare
Rru_A1319 -1.4 -1.4 Triphosphoribosyl-dephospho-CoA synthase (NCBI) compare
Rru_A3139 -1.4 -4.7 Transcriptional Regulator, GntR family (NCBI) compare
Rru_A3393 -1.3 -2.8 Penicillin-binding protein 1A (NCBI) compare
Rru_A1286 -1.3 -0.7 hypothetical protein (NCBI) compare
Rru_A2462 -1.3 -5.4 Enzymatic protein of unknown function (NCBI) compare
Rru_A0128 -1.3 -2.7 Na+/H+ antiporter NhaA (NCBI) compare
Rru_A3627 -1.3 -4.3 Cobyrinic acid a,c-diamide synthase (NCBI) compare
Rru_A3504 -1.3 -8.1 putative phenylacetate-CoA ligase (NCBI) compare
Rru_A1834 -1.3 -4.9 Enoyl-CoA hydratase/isomerase (NCBI) compare
Rru_A0398 -1.3 -3.3 Thiol-disulfide isomerase and thioredoxins-like (NCBI) compare
Rru_A1312 -1.3 -7.7 AMP-dependent synthetase and ligase (NCBI) compare
Rru_A2982 -1.3 -3.2 O-methyltransferase, family 2 (NCBI) compare
Rru_B0050 -1.3 -2.2 dTDP-glucose 4,6-dehydratase (NCBI) compare
Rru_A0052 -1.3 -8.1 Biotin carboxylase (NCBI) compare
Rru_A2018 -1.3 -0.9 hypothetical protein (NCBI) compare
Rru_A3533 -1.3 -4.1 hypothetical protein (NCBI) compare
Rru_A1611 -1.3 -1.3 Cobalamin synthesis protein/P47K (NCBI) compare
Rru_A1571 -1.3 -3.9 metallo-beta-lactamase (NCBI) compare
Rru_A1900 -1.2 -1.6 Transcriptional Regulator, AsnC family (NCBI) compare
Rru_A2936 -1.2 -6.3 Dihydroorotase multifunctional complex type (NCBI) compare
Rru_A3694 -1.2 -2.4 hypothetical protein (NCBI) compare
Rru_A1642 -1.2 -4.5 putative sulfonate/nitrate transport system substrate-binding protein (NCBI) compare
Rru_A0021 -1.2 -1.1 Transcriptional Regulator, MarR family (NCBI) compare
Rru_A2990 -1.2 -4.4 precorrin-2 C20-methyltransferase (NCBI) compare
Rru_A1275 -1.2 -2.5 hypothetical protein (NCBI) compare
Rru_A2603 -1.2 -5.6 Two Component Transcriptional Regulator, LuxR family (NCBI) compare
Rru_A2002 -1.2 -3.3 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (NCBI) compare
Rru_A0637 -1.2 -1.9 hypothetical protein (NCBI) compare
Rru_A1950 -1.2 -1.1 Transcriptional regulator, ModE family (NCBI) compare
Rru_A1998 -1.2 -5.5 ribulose-bisphosphate carboxylase-like protein; rubisco-like protein (NCBI) compare
Rru_A3338 -1.2 -1.2 Protein of unknown function DUF37 (NCBI) compare
Rru_A0207 -1.2 -2.2 Cobalt chelatase, CobT subunit (NCBI) compare
Rru_A1698 -1.2 -4.9 Cation efflux protein (NCBI) compare
Rru_A3359 -1.2 -5.4 Cobyrinic acid a,c-diamide synthase CbiA (NCBI) compare
Rru_A1608 -1.2 -5.4 MscS Mechanosensitive ion channel (NCBI) compare
Rru_A2400 -1.2 -5.9 Ribulose-bisphosphate carboxylase, form II (NCBI) compare
Rru_A2510 -1.2 -1.2 hypothetical protein (NCBI) compare
Rru_A2656 -1.2 -0.7 ATP12 ATPase (NCBI) compare
Rru_A0424 -1.2 -1.0 hypothetical protein (NCBI) compare
Rru_A2575 -1.2 -4.0 hypothetical protein (NCBI) compare
Rru_A0274 -1.2 -2.7 Acetyl-CoA C-acetyltransferase (NCBI) compare
Rru_A2616 -1.1 -7.1 Histone deacetylase superfamily (NCBI) compare
Rru_A2037 -1.1 -2.9 hypothetical protein (NCBI) compare
Rru_A2264 -1.1 -1.4 ferredoxin (NCBI) compare
Rru_A0164 -1.1 -5.3 Sulfate transporter/antisigma-factor antagonist (NCBI) compare
Rru_A0607 -1.1 -2.2 Adenine phosphoribosyl transferase (NCBI) compare


Specific Phenotypes

For 1 genes in this experiment

For carbon source Hexanoic acid in Rhodospirillum rubrum S1H

For carbon source Hexanoic acid across organisms