Experiment set3IT005 for Sinorhizobium meliloti 1021

Compare to:

L-Serine nitrogen source

200 most important genes:

  gene name fitness t score description  
SMc02767 -7.8 -7.6 N-(5'-phosphoribosyl)anthranilate isomerase compare
SMc01843 -7.0 -9.6 5,10-methylenetetrahydrofolate reductase compare
SMc01801 -6.9 -3.5 N-acetylglutamylphosphate reductase (EC 1.2.1.38) (from data) compare
SMc00711 -6.7 -4.3 cyclohexadienyl dehydrogenase compare
SMc04405 -6.4 -9.7 3-isopropylmalate dehydrogenase compare
SMc02245 -6.2 -6.6 dihydroorotate dehydrogenase 2 compare
SMc01431 -6.2 -11.2 acetolactate synthase 3 catalytic subunit compare
SMc00993 -6.0 -9.2 phosphoribosylamine--glycine ligase compare
SMc02899 -6.0 -12.2 prephenate dehydratase compare
SMc03229 -5.9 -2.9 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
SMc00918 -5.8 -10.5 ATP phosphoribosyltransferase regulatory subunit compare
SMc00917 -5.8 -5.8 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
SMc02766 -5.7 -19.7 tryptophan synthase subunit beta compare
SMc02572 -5.5 -4.3 imidazole glycerol phosphate synthase subunit HisH compare
SMc02717 -5.5 -16.8 2-isopropylmalate synthase compare
SMc00235 -5.5 -9.3 anthranilate phosphoribosyltransferase compare
SMc02765 -5.5 -12.6 tryptophan synthase subunit alpha compare
SMc00412 -5.4 -6.9 orotidine 5'-phosphate decarboxylase compare
SMc03777 -5.3 -8.0 gamma-glutamyl phosphate reductase compare
SMc04002 -5.3 -5.3 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
SMc02725 -5.3 -14.0 anthranilate synthase compare
SMc01360 -5.2 -3.6 aspartate carbamoyltransferase catalytic subunit compare
SMc04045 -5.2 -9.1 dihydroxy-acid dehydratase compare
SMc04028 -5.2 -21.7 glutamate synthase compare
SMc01361 -5.1 -8.5 dihydroorotase compare
SMc03797 -5.1 -9.7 homoserine O-succinyltransferase compare
SMc03112 -5.1 -17.8 B12-dependent methionine synthase compare
SMc02570 -5.0 -7.3 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
SMc03895 -5.0 -18.9 pyruvate carboxylase compare
SMc00615 -5.0 -10.8 phosphoribosylaminoimidazole synthetase compare
SMc03763 -4.9 -3.4 cytosine-specific methyltransferase compare
SMc03823 -4.8 -14.3 isopropylmalate isomerase large subunit compare
SMc00236 -4.8 -4.6 Indole-3-glycerol phosphate synthase compare
SMc02165 -4.8 -10.7 orotate phosphoribosyltransferase compare
SMc00293 -4.7 -12.3 homoserine dehydrogenase compare
SMc00488 -4.7 -16.1 phosphoribosylformylglycinamidine synthase II compare
SMc00495 -4.6 -3.6 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
SMc03826 -4.6 -4.0 argininosuccinate synthase compare
SMc00614 -4.6 -7.1 phosphoribosylglycinamide formyltransferase compare
SMc01726 -4.5 -4.3 acetylglutamate kinase compare
SMc02137 -4.5 -4.8 ornithine carbamoyltransferase compare
SMc04088 -4.4 -10.1 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
SMc01569 -4.4 -1.8 carbamoyl phosphate synthase small subunit compare
SMc03070 -4.4 -8.6 glucose-6-phosphate 1-dehydrogenase compare
SMc04026 -4.3 -7.8 glutamate synthase compare
SMc00493 -4.3 -6.9 phosphoribosylformylglycinamidine synthase I compare
SMc02166 -4.3 -10.8 dihydroorotase compare
SMc02569 -4.2 -4.2 imidazole glycerol phosphate synthase subunit HisF compare
SMc04001 -4.1 -1.2 phosphoribosylaminoimidazole carboxylase catalytic subunit protein compare
SMc01880 -4.1 -2.8 pantoate--beta-alanine ligase compare
SMc02138 -4.1 -6.1 acetylornithine transaminase compare
SMc01004 -4.1 -10.9 phosphoribosyl-AMP cyclohydrolase compare
SMc01215 -4.1 -2.8 carbamoyl phosphate synthase large subunit compare
SMc00554 -4.0 -9.0 amidophosphoribosyltransferase compare
SMc01881 -4.0 -3.5 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
SMc02246 -3.9 -1.1 hypothetical protein compare
SMc02307 -3.9 -9.7 histidinol dehydrogenase compare
SMc03795 -3.8 -1.6 isopropylmalate isomerase small subunit compare
SMc00963 -3.8 -4.8 hypothetical protein compare
SMc02217 -3.8 -8.0 O-succinylhomoserine sulfhydrylase compare
SMc03776 -3.8 -2.9 gamma-glutamyl kinase compare
SM_b21174 -3.7 -4.0 phosphate uptake ABC transporter permease compare
SMc01770 -3.6 -1.2 serine hydroxymethyltransferase compare
SMc02755 -3.6 -6.2 S-adenosyl-L-homocysteine hydrolase compare
SMc00815 -3.4 -2.7 inosine 5'-monophosphate dehydrogenase compare
SMc00017 -3.4 -1.4 homoserine kinase compare
SM_b21176 -3.4 -5.1 phosphate uptake ABC transporter substrate-binding protein precursor compare
SMc03978 -3.4 -4.0 transketolase compare
SMc02683 -3.4 -2.9 hypothetical protein compare
SM_b21177 -3.4 -8.0 phosphate uptake ABC transporter ATP-binding protein compare
SMc00494 -3.4 -1.9 phosphoribosylformylglycinamidine synthase subunit PurS compare
SMc04346 -3.2 -5.3 ketol-acid reductoisomerase compare
SMc02574 -3.1 -4.4 imidazoleglycerol-phosphate dehydratase compare
SMc01124 -3.1 -7.6 PII uridylyl-transferase compare
SMc00053 -3.1 -1.3 monovalent cation/H+ antiporter subunit C compare
SMa0789 -3.1 -4.7 GntR family transcriptional regulator compare
SMa1635 -3.0 -1.9 hypothetical protein compare
SMc01042 -2.9 -5.6 nitrogen regulation protein compare
SM_b21175 -2.9 -3.3 phosphate uptake ABC transporter permease compare
SMc00294 -2.6 -6.5 aminotransferase compare
SMc00131 -2.5 -10.8 transcriptional regulator compare
SMa1365 -2.5 -1.6 ATP-binding protein compare
SMc01043 -2.4 -6.9 nitrogen assimilation regulatory protein compare
SMc00088 -2.4 -2.3 hypothetical protein compare
SMc01842 -2.4 -2.4 methyltransferase transcription regulator protein compare
SMc02707 -2.4 -4.1 hypothetical protein compare
SMc02858 -2.3 -1.3 chaperone protein DnaJ compare
SMc00073 -2.3 -3.1 hypothetical protein compare
SM_b21524 -2.3 -3.2 septum formation inhibitor compare
SMc00496 -2.3 -1.5 hypothetical protein compare
SMc02425 -2.3 -5.2 transcriptional regulator compare
SMc02141 -2.2 -4.8 phosphate transporter PhoU compare
SMc02102 -2.2 -5.2 hypothetical protein compare
SMc01139 -2.2 -4.4 RNA polymerase factor sigma-54 compare
SMc01430 -2.2 -4.3 acetolactate synthase 3 regulatory subunit compare
SMc03924 -2.1 -10.0 glycogen synthase compare
SMc02724 -2.1 -2.9 hypothetical protein compare
SMc02909 -2.1 -2.4 transglycosylase transmembrane protein compare
SMc03068 -2.1 -7.5 phosphogluconate dehydratase compare
SMc01147 -2.0 -4.0 coproporphyrinogen III oxidase compare
SMc00492 -2.0 -0.8 hypothetical protein compare
SMc01256 -1.9 -9.9 L-serine dehydratase conserved
SMc01041 -1.9 -1.7 NIFR3-like protein compare
SMc01578 -1.9 -8.9 aspartate aminotransferase compare
SMc02229 -1.8 -9.7 acyl-CoA dehydrogenase compare
SMc02407 -1.8 -5.9 hypothetical protein compare
SMc01568 -1.8 -1.9 hypothetical protein compare
SMc02140 -1.7 -2.1 phosphate regulon transcriptional regulatory protein compare
SMc00302 -1.7 -2.7 hypothetical protein compare
SMc00450 -1.7 -1.8 protoheme IX farnesyltransferase compare
SMc01850 -1.7 -2.8 hypothetical protein compare
SM_b20948 -1.7 -1.7 glucosyltransferase compare
SMc00067 -1.6 -6.0 outer-membranne lipoprotein compare
SM_b20086 -1.6 -1.5 hypothetical protein compare
SMc04233 -1.5 -3.4 hypothetical protein compare
SMc01438 -1.5 -5.8 protease precursor signal peptide protein compare
SMc01364 -1.5 -1.0 DNA topoisomerase I compare
SMc00296 -1.5 -6.1 POLY3-hydroxybutyrate polymerase compare
SMc01183 -1.5 -1.3 LexA repressor compare
SMc01440 -1.5 -3.4 hydrolase serine protease transmembrane protein compare
SMc00619 -1.4 -2.1 hypothetical protein compare
SMc03100 -1.4 -0.7 hypothetical protein compare
SM_b20902 -1.4 -7.0 sugar uptake ABC transporter substrate-binding protein precursor compare
SMc02521 -1.4 -2.7 glycerol-3-phosphate regulon repressor transcription regulator protein compare
SMc04005 -1.4 -6.0 pyruvate kinase compare
SMc02385 -1.4 -2.7 hypothetical protein compare
SMc02510 -1.4 -0.9 ferric uptake regulation protein compare
SMc00914 -1.4 -4.3 oxidoreductase compare
SMc00876 -1.4 -4.4 ATP-binding MRP protein compare
SMc02835 -1.3 -4.2 glucokinase compare
SMc02983 -1.3 -3.6 ornithine, DAP, or arginine decarboxylase compare
SM_b20903 -1.3 -6.1 sugar uptake ABC transporter permease compare
SMc02147 -1.3 -3.4 phosphate regulon sensor histidine kinase transmembrane protein compare
SMc01930 -1.3 -2.0 hypothetical protein compare
SMc03184 -1.3 -1.2 PH adaptation potassium efflux system G transmembrane protein compare
SM_b20904 -1.3 -2.6 sugar uptake ABC transporter ATP-binding protein compare
SMc01441 -1.3 -3.7 membrane bound protease compare
SMc02228 -1.2 -5.1 acetyl-CoA acetyltransferase compare
SMc02685 -1.2 -2.6 hypothetical protein compare
SMc04121 -1.2 -1.3 uracil phosphoribosyltransferase compare
SMc00565 -1.2 -1.4 50S ribosomal protein L9 compare
SMc02144 -1.2 -2.3 phosphate ABC transporter permease compare
SMc02058 -1.2 -2.1 YAJC protein compare
SMc02149 -1.2 -1.5 hypothetical protein compare
SMc04296 -1.1 -0.9 cell division protein FtsZ compare
SMc01207 -1.1 -1.4 S-adenosylmethionine--tRNA ribosyltransferase-isomerase compare
SMc01026 -1.1 -2.6 hypothetical protein compare
SM_b21191 -1.1 -4.2 surface saccharide ABC transporter ATP-binding/membrane spanning protein compare
SMc00856 -1.1 -0.9 hypothetical protein compare
SMc01206 -1.1 -1.4 queuine tRNA-ribosyltransferase compare
SMa2168 -1.1 -1.1 tRNA-Met compare
SMc01845 -1.1 -1.4 transglycosylase transmembrane protein compare
SMc02123 -1.1 -2.5 required for sulfate utilization, putative electron transport protein for sulfite reductase (from data) compare
SMc03993 -1.1 -2.4 hypothetical protein compare
SMc01368 -1.1 -2.6 transport transmembrane protein compare
SMc01508 -1.1 -1.6 hypothetical protein compare
SMc03140 -1.1 -2.9 transcriptional regulator compare
SMa1770 -1.1 -0.9 hypothetical protein compare
SMc02115 -1.1 -1.0 hypothetical protein compare
SMc00334 -1.1 -1.0 cytidylate kinase compare
SMc00025 -1.0 -3.8 pyruvate phosphate dikinase compare
SMa0211 -1.0 -0.7 hypothetical protein compare
SMc01341 -1.0 -3.0 hypothetical protein compare
SMc03128 -1.0 -2.1 ABC transporter permease compare
SMc00143 -1.0 -1.1 molybdopterin-guanine dinucleotide biosynthesis protein MobA compare
SM_b20823 -1.0 -4.5 cell surface saccharide synthesis protein compare
SM_b20511 -1.0 -2.7 short-chain dehydrogenase compare
SMc00712 -1.0 -1.0 hypothetical protein compare
SM_b20618 -1.0 -2.0 thiamine-phosphate pyrophosphorylase compare
SMc04327 -1.0 -0.8 hypothetical protein compare
SMc01929 -1.0 -2.4 hypothetical protein compare
SMc02753 -1.0 -1.2 PTS system transporter subunit IIA compare
SMc02142 -1.0 -4.1 phosphate transporter ATP-binding protein compare
SMc03014 -1.0 -3.1 flagellar MS-ring protein compare
SMc03242 -1.0 -2.0 GTP-binding protein compare
SMc02901 -1.0 -0.6 hypothetical protein compare
SMc02225 -1.0 -2.3 hypothetical protein compare
SMc02124 -1.0 -5.6 nitrite reductase compare
SMa1368 -0.9 -2.7 hypothetical protein compare
SM_b20307 -0.9 -0.8 dihydroxyacetone kinase compare
SMc00467 -0.9 -3.1 hypothetical protein compare
SM_b21035 -0.9 -3.5 hypothetical protein compare
SMc01119 -0.9 -1.3 hypothetical protein compare
SMc01259 -0.9 -2.2 hypothetical protein compare
SM_b20452 -0.9 -1.9 hypothetical protein compare
SMc03092 -0.9 -2.0 transcriptional regulator compare
SM_b21036 -0.9 -1.8 hypothetical protein compare
SM_b20129 -0.9 -2.0 transcriptional regulator compare
SMc00013 -0.9 -1.6 cytochrome C oxidase subunit III transmembrane protein compare
SM_b20540 -0.9 -0.9 hypothetical protein compare
SMc02050 -0.9 -1.5 trigger factor compare
SM_b20105 -0.9 -1.0 transcriptional regulator compare
SMc00941 -0.9 -1.1 hypothetical protein compare
SM_b20711 -0.9 -1.0 hypothetical protein compare
SMa1644 -0.9 -2.5 ABC transporter permease compare
SMc01007 -0.9 -0.8 hypothetical protein compare
SMc00419 -0.9 -2.8 glutathione synthetase compare
SMc02886 -0.9 -1.8 signal peptide protein compare
SMc00859 -0.9 -1.4 hypothetical protein compare
SMc04213 -0.9 -1.2 diacylglycerol kinase compare


Specific Phenotypes

For 1 genes in this experiment

For nitrogen source L-Serine in Sinorhizobium meliloti 1021

For nitrogen source L-Serine across organisms