Experiment set3IT002 for Methanococcus maripaludis S2

Compare to:

H2 McCas, 5g/L bicarb, 40 psi H2CO2

200 most important genes:

  gene name fitness t score description  
MMP_RS03315 -6.1 -2.4 ferrous iron transport protein A compare
MMP_RS01225 -4.9 -8.5 DUF5379 domain-containing protein compare
MMP_RS02280 -4.2 -1.4 DUF211 domain-containing protein compare
MMP_RS07730 -4.1 -3.1 pyruvate synthase subunit beta compare
MMP_RS08635 -4.1 -3.5 UbiA family prenyltransferase compare
MMP_RS04720 -4.0 -5.3 DedA family protein compare
MMP_RS03400 -3.9 -4.5 archease compare
MMP_RS01955 -3.9 -4.0 hypothetical protein compare
MMP_RS07005 -3.8 -1.2 4Fe-4S binding protein compare
MMP_RS08745 -3.6 -8.8 CDP-2 3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMP_RS01380 -3.6 -5.4 PHP domain-containing protein compare
MMP_RS07845 -3.5 -5.4 LL-diaminopimelate aminotransferase compare
MMP_RS01500 -3.5 -4.1 CBS domain-containing protein compare
MMP_RS07735 -3.5 -1.1 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha compare
MMP_RS08820 -3.4 -8.6 hypothetical protein compare
MMP_RS06120 -3.4 -4.1 UPF0147 family protein compare
MMP_RS01175 -3.4 -6.5 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS06355 -3.4 -4.1 molybdenum cofactor biosynthesis protein MoaE compare
MMP_RS08650 -3.4 -4.4 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMP_RS05640 -3.3 -8.2 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMP_RS09020 -3.2 -3.6 hypothetical protein compare
MMP_RS01005 -3.1 -2.5 riboflavin synthase compare
MMP_RS06730 -3.1 -3.1 phosphopantothenate/pantothenate synthetase compare
MMP_RS06110 -3.1 -4.7 ATP-dependent protease LonB compare
MMP_RS00515 -3.0 -1.8 DUF655 domain-containing protein compare
MMP_RS03640 -3.0 -4.9 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS06885 -3.0 -5.0 50S ribosome-binding GTPase compare
MMP_RS03025 -3.0 -7.6 molybdenum cofactor guanylyltransferase compare
MMP_RS07635 -2.9 -10.9 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS05815 -2.9 -8.4 NOL1/NOP2/sun family putative RNA methylase compare
MMP_RS02875 -2.9 -13.6 chorismate pyruvate-lyase family protein compare
MMP_RS06670 -2.9 -5.7 glucose-6-phosphate isomerase compare
MMP_RS00695 -2.9 -1.6 biotin--[acetyl-CoA-carboxylase] ligase compare
MMP_RS08715 -2.9 -3.2 formylmethanofuran dehydrogenase subunit B compare
MMP_RS06400 -2.8 -2.8 4Fe-4S binding protein compare
MMP_RS02010 -2.8 -11.4 PHP domain-containing protein compare
MMP_RS02240 -2.8 -6.4 methanogenesis marker 7 protein compare
MMP_RS01925 -2.8 -10.3 DUF1616 domain-containing protein compare
MMP_RS04780 -2.8 -4.4 ribonuclease P compare
MMP_RS01020 -2.8 -1.8 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS00895 -2.8 -6.7 hypothetical protein compare
MMP_RS01905 -2.8 -13.3 glycosyltransferase compare
MMP_RS06350 -2.8 -7.2 HesA/MoeB/ThiF family protein compare
MMP_RS06270 -2.7 -6.5 TIGR00300 family protein compare
MMP_RS00300 -2.7 -1.4 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS03435 -2.7 -3.6 ketol-acid reductoisomerase compare
MMP_RS02195 -2.7 -5.9 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS03035 -2.7 -6.0 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS01960 -2.7 -0.9 hypothetical protein compare
MMP_RS00810 -2.7 -12.3 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS04500 -2.7 -18.0 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
MMP_RS01895 -2.7 -12.8 flippase compare
MMP_RS06370 -2.6 -7.1 biotin synthase BioB compare
MMP_RS01915 -2.6 -12.1 DUF354 domain-containing protein compare
MMP_RS07750 -2.6 -7.0 DUF357 domain-containing protein compare
MMP_RS06925 -2.6 -3.6 ribonuclease VapC4 compare
MMP_RS00110 -2.6 -4.7 hypothetical protein compare
MMP_RS00685 -2.6 -6.3 2-phospho-L-lactate guanylyltransferase compare
MMP_RS01900 -2.6 -14.1 hypothetical protein compare
MMP_RS03205 -2.6 -2.7 peptidyl-tRNA hydrolase Pth2 compare
MMP_RS05845 -2.6 -3.3 tRNA-intron lyase compare
MMP_RS05425 -2.6 -6.3 monovalent cation/H+ antiporter complex subunit F compare
MMP_RS03700 -2.5 -10.5 sodium:proton antiporter compare
MMP_RS05555 -2.5 -2.4 DUF4040 domain-containing protein compare
MMP_RS00520 -2.5 -2.6 RNA polymerase Rpb4 family protein compare
MMP_RS06105 -2.5 -13.9 hydrogenase maturation peptidase HycI compare
MMP_RS04710 -2.5 -2.8 hypothetical protein compare
MMP_RS00735 -2.5 -5.6 5 10-methenyltetrahydromethanopterin hydrogenase compare
MMP_RS05515 -2.5 -9.9 cyclic pyranopterin monophosphate synthase MoaC compare
MMP_RS00315 -2.5 -9.1 Nif3-like dinuclear metal center hexameric protein compare
MMP_RS03015 -2.5 -8.9 GTP 3' 8-cyclase MoaA compare
MMP_RS07695 -2.5 -9.9 DUF3236 domain-containing protein compare
MMP_RS04685 -2.5 -4.6 DUF126 domain-containing protein compare
MMP_RS08095 -2.5 -9.0 dethiobiotin synthase compare
MMP_RS02145 -2.5 -8.0 winged helix-turn-helix transcriptional regulator compare
MMP_RS06900 -2.5 -4.8 coenzyme F420-reducing hydrogenase FrhD protein compare
MMP_RS06020 -2.4 -7.3 archaeoflavoprotein AfpA compare
MMP_RS04850 -2.4 -18.0 UPF0254 family protein compare
MMP_RS01910 -2.4 -9.7 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
MMP_RS02800 -2.4 -6.2 nucleotidyltransferase domain-containing protein compare
MMP_RS07605 -2.4 -6.0 diadenylate cyclase compare
MMP_RS08435 -2.4 -3.6 Era-like GTP-binding protein compare
MMP_RS08100 -2.4 -7.9 8-amino-7-oxononanoate synthase compare
MMP_RS08460 -2.4 -4.0 proteasome-activating nucleotidase compare
MMP_RS08440 -2.4 -4.1 cell division protein SepF compare
MMP_RS07580 -2.4 -5.3 DUF356 domain-containing protein compare
MMP_RS01920 -2.3 -12.9 glycosyltransferase family 2 protein compare
MMP_RS06895 -2.3 -3.0 selenocysteine-specific translation elongation factor compare
MMP_RS00305 -2.3 -3.1 phosphoribosyl-ATP diphosphatase compare
MMP_RS07390 -2.3 -3.3 cell division protein FtsZ compare
MMP_RS01325 -2.3 -2.6 dihydroneopterin aldolase family protein compare
MMP_RS04775 -2.3 -5.1 adenosylhomocysteinase compare
MMP_RS01800 -2.3 -5.6 TIGR00303 family protein compare
MMP_RS01755 -2.3 -2.1 DUF2097 domain-containing protein compare
MMP_RS00725 -2.3 -10.1 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMP_RS08210 -2.3 -3.0 phosphatidylglycerophosphatase A compare
MMP_RS08720 -2.3 -1.9 4Fe-4S binding protein compare
MMP_RS07755 -2.3 -2.2 DUF555 domain-containing protein compare
MMP_RS01830 -2.2 -2.7 tRNA-Val compare
MMP_RS03110 -2.2 -7.2 glycosyltransferase family 2 protein compare
MMP_RS03445 -2.2 -1.9 methanogenesis marker 17 protein compare
MMP_RS06295 -2.2 -8.6 methanogenesis marker 14 protein compare
MMP_RS06230 -2.1 -4.3 helix-turn-helix domain-containing protein compare
MMP_RS00730 -2.1 -8.2 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMP_RS06475 -2.1 -6.6 FAD-dependent oxidoreductase compare
MMP_RS02345 -2.1 -3.9 GTP-dependent dephospho-CoA kinase family protein compare
MMP_RS08790 -2.1 -3.7 translation initiation factor IF-2 subunit alpha compare
MMP_RS08105 -2.1 -9.5 6-carboxyhexanoate--CoA ligase compare
MMP_RS07600 -2.0 -4.0 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS06285 -2.0 -3.7 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS06395 -2.0 -5.6 ThiF family adenylyltransferase compare
MMP_RS05930 -2.0 -4.0 3-isopropylmalate dehydratase large subunit compare
MMP_RS06310 -2.0 -3.3 NAD(P)/FAD-dependent oxidoreductase compare
MMP_RS04585 -2.0 -11.3 AIR synthase related protein compare
MMP_RS07645 -2.0 -8.3 aldehyde dehydrogenase family protein compare
MMP_RS00915 -2.0 -9.0 DUF116 domain-containing protein compare
MMP_RS06630 -2.0 -2.1 UPF0058 family protein compare
MMP_RS02135 -1.9 -7.7 DUF5612 domain-containing protein compare
MMP_RS07380 -1.9 -3.7 transcription elongation factor Spt5 compare
MMP_RS03580 -1.9 -5.2 signal recognition particle-docking protein FtsY compare
MMP_RS07700 -1.9 -12.8 DUF1188 domain-containing protein compare
MMP_RS08195 -1.9 -10.7 hypothetical protein compare
MMP_RS01795 -1.9 -2.7 methanogenesis marker 6 protein compare
MMP_RS06625 -1.9 -4.1 DNA primase compare
MMP_RS01940 -1.9 -6.2 MoxR family ATPase compare
MMP_RS06980 -1.9 -9.6 tRNA 2-thiocytidine biosynthesis TtcA family protein compare
MMP_RS01725 -1.9 -6.7 class I SAM-dependent methyltransferase family protein compare
MMP_RS01365 -1.8 -2.4 archaeal proteasome endopeptidase complex subunit alpha compare
MMP_RS07355 -1.8 -1.4 transcription factor S compare
MMP_RS02355 -1.8 -4.6 30S ribosomal protein S27ae compare
MMP_RS07195 -1.8 -10.1 M20 family metallo-hydrolase compare
MMP_RS06940 -1.8 -2.7 polyprenyl diphosphate synthase compare
MMP_RS05265 -1.8 -3.0 2-isopropylmalate synthase compare
MMP_RS03095 -1.8 -10.4 diphthine synthase compare
MMP_RS01970 -1.8 -7.6 TIGR04279 domain-containing protein compare
MMP_RS01335 -1.8 -3.4 prefoldin subunit beta compare
MMP_RS05440 -1.7 -9.8 winged helix-turn-helix transcriptional regulator compare
MMP_RS01265 -1.7 -1.8 hypothetical protein compare
MMP_RS02245 -1.7 -4.6 hypothetical protein compare
MMP_RS07875 -1.7 -7.8 hypothetical protein compare
MMP_RS07545 -1.7 -1.4 HTH domain-containing protein compare
MMP_RS02900 -1.7 -1.0 imidazoleglycerol-phosphate dehydratase HisB compare
MMP_RS07090 -1.7 -9.9 tRNA (adenine-N1)-methyltransferase compare
MMP_RS05550 -1.7 -1.0 cation:proton antiporter compare
MMP_RS03475 -1.6 -1.0 hypothetical protein compare
MMP_RS01840 -1.6 -10.2 TIGR00289 family protein compare
MMP_RS07350 -1.6 -1.3 preprotein translocase subunit Sec61beta compare
MMP_RS06340 -1.6 -9.1 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS01975 -1.6 -10.8 hypothetical protein compare
MMP_RS01220 -1.6 -9.2 hypothetical protein compare
MMP_RS00115 -1.6 -11.1 radical SAM protein compare
MMP_RS07425 -1.6 -5.2 GTP-binding protein compare
MMP_RS03155 -1.5 -5.5 precorrin-6A reductase compare
MMP_RS04870 -1.5 -5.2 TIGR02253 family HAD-type hydrolase compare
MMP_RS07200 -1.5 -5.9 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS01935 -1.5 -8.0 DUF58 domain-containing protein compare
MMP_RS06215 -1.5 -4.1 30S ribosomal protein S6e compare
MMP_RS06865 -1.5 -2.6 HypC/HybG/HupF family hydrogenase formation chaperone compare
MMP_RS01930 -1.5 -9.7 hypothetical protein compare
MMP_RS04890 -1.5 -1.3 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS07555 -1.5 -1.0 monovalent cation/H+ antiporter subunit E compare
MMP_RS00320 -1.5 -2.6 class I SAM-dependent methyltransferase compare
MMP_RS05250 -1.5 -2.6 NFYB/HAP3 family transcription factor subunit compare
MMP_RS01890 -1.5 -4.8 nucleotide sugar dehydrogenase compare
MMP_RS02110 -1.4 -1.9 hypothetical protein compare
MMP_RS07525 -1.4 -7.0 4Fe-4S binding protein compare
MMP_RS03145 -1.4 -4.7 fibrillarin-like rRNA/tRNA 2'-O-methyltransferase compare
MMP_RS01385 -1.4 -0.9 imidazole glycerol phosphate synthase subunit HisH compare
MMP_RS08370 -1.4 -0.9 cation:proton antiporter subunit C compare
MMP_RS03960 -1.4 -1.5 hypothetical protein compare
MMP_RS01885 -1.4 -6.3 Gfo/Idh/MocA family oxidoreductase compare
MMP_RS04605 -1.4 -6.8 cobalt ECF transporter T component CbiQ compare
MMP_RS02190 -1.4 -3.4 sulfopyruvate decarboxylase subunit alpha compare
MMP_RS07075 -1.4 -2.0 phosphomannomutase/phosphoglucomutase compare
MMP_RS05920 -1.4 -0.9 50S ribosomal protein L37e compare
MMP_RS07575 -1.4 -2.2 RNA ligase partner protein compare
MMP_RS07820 -1.4 -5.6 UPF0104 family protein compare
MMP_RS07710 -1.3 -4.8 cell division protein FtsZ compare
MMP_RS08445 -1.3 -4.7 DUF2099 family protein compare
MMP_RS01880 -1.3 -5.6 DegT/DnrJ/EryC1/StrS family aminotransferase compare
MMP_RS03600 -1.3 -2.6 triose-phosphate isomerase compare
MMP_RS08915 -1.3 -2.2 2 5-diamino-6-(ribosylamino)-4(3H)-pyrimidinone 5'-phosphate reductase compare
MMP_RS04615 -1.3 -3.0 PDGLE domain-containing protein compare
MMP_RS03140 -1.3 -9.0 hypothetical protein compare
MMP_RS05545 -1.3 -4.6 pyridoxal phosphate-dependent aminotransferase compare
MMP_RS05345 -1.3 -7.8 hypothetical protein compare
MMP_RS01950 -1.3 -7.5 hypothetical protein compare
MMP_RS08320 -1.2 -5.1 molybdopterin molybdotransferase MoeA compare
MMP_RS00060 -1.2 -1.2 3-dehydroquinate synthase II compare
MMP_RS01945 -1.2 -6.3 DUF4350 domain-containing protein compare
MMP_RS00900 -1.2 -2.4 50S ribosomal protein L39e compare
MMP_RS01610 -1.2 -3.4 hypothetical protein compare
MMP_RS01665 -1.2 -2.4 DUF2111 domain-containing protein compare
MMP_RS07435 -1.2 -2.6 GMP synthase subunit A compare
MMP_RS06770 -1.2 -7.0 DHH family phosphoesterase compare
MMP_RS01875 -1.2 -6.6 N-acetyltransferase compare
MMP_RS08355 -1.2 -4.8 Na(+)/H(+) antiporter subunit B compare
MMP_RS03340 -1.1 -1.0 ABC transporter ATP-binding protein compare
MMP_RS02165 -1.1 -7.2 tRNA-dihydrouridine synthase compare
MMP_RS07445 -1.1 -4.7 helix-turn-helix domain-containing protein compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis S2 in rich t1 experiments