Experiment set3IT001 for Sinorhizobium meliloti 1021

Compare to:

L-Arginine nitrogen source

200 most important genes:

  gene name fitness t score description  
SMc02572 -8.0 -3.6 imidazole glycerol phosphate synthase subunit HisH compare
SMc00917 -6.3 -3.9 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
SMc01494 -6.2 -9.4 phosphoserine phosphatase compare
SMc02717 -6.0 -5.8 2-isopropylmalate synthase compare
SM_b20509 -5.9 -2.6 transcriptional regulator compare
SMc00918 -5.9 -7.0 ATP phosphoribosyltransferase regulatory subunit compare
SMc00640 -5.8 -5.7 phosphoserine aminotransferase compare
SMc00235 -5.8 -6.7 anthranilate phosphoribosyltransferase compare
SMc00615 -5.8 -11.1 phosphoribosylaminoimidazole synthetase compare
SMc04026 -5.6 -7.7 glutamate synthase compare
SMc00412 -5.6 -3.9 orotidine 5'-phosphate decarboxylase compare
SMa1635 -5.6 -1.5 hypothetical protein compare
SMc00494 -5.5 -1.4 phosphoribosylformylglycinamidine synthase subunit PurS compare
SMc03797 -5.4 -9.0 homoserine O-succinyltransferase compare
SM_b21175 -5.4 -3.6 phosphate uptake ABC transporter permease compare
SMc02899 -5.4 -10.9 prephenate dehydratase compare
SMc03112 -5.4 -10.3 B12-dependent methionine synthase compare
SMc01361 -5.3 -3.7 dihydroorotase compare
SMc02753 -5.3 -1.4 PTS system transporter subunit IIA compare
SMc00334 -5.3 -2.3 cytidylate kinase compare
SMc00493 -5.2 -3.6 phosphoribosylformylglycinamidine synthase I compare
SMc00993 -5.1 -7.8 phosphoribosylamine--glycine ligase compare
SMc02245 -4.9 -4.3 dihydroorotate dehydrogenase 2 compare
SMc04052 -4.9 -1.3 transcriptional regulator compare
SMc01004 -4.9 -8.1 phosphoribosyl-AMP cyclohydrolase compare
SMc00488 -4.9 -14.0 phosphoribosylformylglycinamidine synthase II compare
SM_b21177 -4.8 -5.7 phosphate uptake ABC transporter ATP-binding protein compare
SMc01431 -4.8 -10.2 acetolactate synthase 3 catalytic subunit compare
SMc00711 -4.8 -3.8 cyclohexadienyl dehydrogenase compare
SM_b21633 -4.7 -1.2 enoyl-CoA hydratase compare
SMc00236 -4.6 -3.4 Indole-3-glycerol phosphate synthase compare
SMc04045 -4.6 -6.5 dihydroxy-acid dehydratase compare
SMc04213 -4.6 -2.0 diacylglycerol kinase compare
SM_b21173 -4.6 -2.0 hypothetical protein compare
SMc02107 -4.5 -1.2 hypothetical protein compare
SMc03070 -4.5 -6.1 glucose-6-phosphate 1-dehydrogenase compare
SM_b20307 -4.4 -1.1 dihydroxyacetone kinase compare
SMc04028 -4.4 -16.9 glutamate synthase compare
SMc02102 -4.4 -3.0 hypothetical protein compare
SMc01360 -4.4 -2.7 aspartate carbamoyltransferase catalytic subunit compare
SMc00088 -4.3 -1.6 hypothetical protein compare
SMc02569 -4.3 -3.0 imidazole glycerol phosphate synthase subunit HisF compare
SMc01438 -4.3 -5.6 protease precursor signal peptide protein compare
SMc03839 -4.3 -1.9 hypothetical protein compare
SMc04002 -4.3 -5.3 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
SMc00641 -4.3 -6.5 D-3-phosphoglycerate dehydrogenase compare
SMc00495 -4.3 -3.6 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
SMa0789 -4.3 -3.8 GntR family transcriptional regulator compare
SMc02858 -4.3 -1.1 chaperone protein DnaJ compare
SMc02833 -4.2 -2.2 penicillin-insensitive murein endopeptidase compare
SMc04088 -4.2 -9.2 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
SMc02853 -4.2 -5.2 hypothetical protein compare
SMc00293 -4.2 -8.0 homoserine dehydrogenase compare
SMc02165 -4.1 -7.5 orotate phosphoribosyltransferase compare
SMc02570 -4.1 -5.4 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
SMc00619 -4.1 -2.1 hypothetical protein compare
SMc04405 -4.1 -4.4 3-isopropylmalate dehydrogenase compare
SMc03823 -4.1 -6.0 isopropylmalate isomerase large subunit compare
SMc01881 -4.0 -2.7 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
SMc02510 -4.0 -1.0 ferric uptake regulation protein compare
SMa1118 -3.9 -1.7 HspC2 heat shock protein compare
SMa1017 -3.9 -1.4 hypothetical protein compare
SMa0647 -3.8 -1.7 hypothetical protein compare
SMc03250 -3.8 -2.0 hypothetical protein compare
SMc03008 -3.8 -1.0 chemotaxis protein compare
SMc00791 -3.8 -1.4 hypothetical protein compare
SMc02582 -3.8 -2.6 hypothetical protein compare
SMc03850 -3.8 -1.4 heme exporter D (cytochrome C-type biogenesis protein) transmembrane compare
SM_b20948 -3.8 -1.3 glucosyltransferase compare
SMc02693 -3.8 -1.4 peptidyl-tRNA hydrolase compare
SMc03763 -3.7 -2.6 cytosine-specific methyltransferase compare
SMc02767 -3.7 -6.2 N-(5'-phosphoribosyl)anthranilate isomerase compare
SM_b20105 -3.7 -1.3 transcriptional regulator compare
SMc00726 -3.7 -1.0 thiol:disulfide interchange redox-active center transmembrane protein compare
SMc01569 -3.7 -1.3 carbamoyl phosphate synthase small subunit compare
SMa1924 -3.7 -0.9 hypothetical protein compare
SMc01842 -3.7 -2.0 methyltransferase transcription regulator protein compare
SMc02787 -3.6 -3.0 hypothetical protein compare
SMc01495 -3.6 -3.0 transcriptional regulator compare
SMc02166 -3.6 -8.3 dihydroorotase compare
SMc01929 -3.6 -3.5 hypothetical protein compare
SMc00554 -3.5 -7.5 amidophosphoribosyltransferase compare
SMc01843 -3.5 -5.1 5,10-methylenetetrahydrofolate reductase compare
SMc03978 -3.5 -2.4 transketolase compare
SMa1053 -3.4 -1.3 hypothetical protein compare
SMc04001 -3.4 -0.9 phosphoribosylaminoimidazole carboxylase catalytic subunit protein compare
SM_b21174 -3.4 -3.6 phosphate uptake ABC transporter permease compare
SMc02217 -3.4 -4.7 O-succinylhomoserine sulfhydrylase compare
SMc00294 -3.4 -6.3 aminotransferase compare
SMc02451 -3.4 -1.2 hypothetical protein compare
SMc00565 -3.4 -1.2 50S ribosomal protein L9 compare
SMc02725 -3.4 -5.4 anthranilate synthase compare
SMc02861 -3.4 -1.7 phosphate transporter compare
SMc01472 -3.4 -1.2 50S ribosomal protein L11 methyltransferase compare
SMc03053 -3.3 -1.2 flagellar biosynthesis protein FliQ compare
SMc01215 -3.2 -2.2 carbamoyl phosphate synthase large subunit compare
SMc02246 -3.2 -0.8 hypothetical protein compare
SMc02495 -3.2 -1.1 translaldolase compare
SMc01183 -3.1 -1.1 LexA repressor compare
SMc03795 -3.1 -1.1 isopropylmalate isomerase small subunit compare
SMc02683 -3.1 -1.9 hypothetical protein compare
SM_b21176 -3.0 -3.9 phosphate uptake ABC transporter substrate-binding protein precursor compare
SMc02755 -3.0 -6.4 S-adenosyl-L-homocysteine hydrolase compare
SMc00492 -3.0 -0.8 hypothetical protein compare
SMc00709 -2.9 -2.3 hypothetical protein compare
SMc04346 -2.9 -3.5 ketol-acid reductoisomerase compare
SMc00800 -2.9 -1.1 hypothetical protein compare
SMc02363 -2.9 -2.8 cytochrome C-type biogenesis transmembrane protein compare
SMc00963 -2.9 -3.0 hypothetical protein compare
SMc00017 -2.9 -1.1 homoserine kinase compare
SMc00378 -2.9 -2.7 exodeoxyribonuclease VII large subunit compare
SMc01363 -2.9 -1.0 hypothetical protein compare
SMa1894 -2.8 -2.0 methionine sulfoxide reductase B compare
SMc04296 -2.8 -1.0 cell division protein FtsZ compare
SMa1239 -2.8 -1.4 NapD component of periplasmic nitrate reductase compare
SMc02574 -2.8 -3.2 imidazoleglycerol-phosphate dehydratase compare
SMc04348 -2.7 -2.2 transcriptional regulator compare
SMc04298 -2.5 -2.6 hypothetical protein compare
SMa1639 -2.5 -0.9 hypothetical protein compare
SMc01440 -2.5 -3.7 hydrolase serine protease transmembrane protein compare
SMc00131 -2.5 -6.6 transcriptional regulator compare
SMc01880 -2.5 -2.4 pantoate--beta-alanine ligase compare
SMc00067 -2.5 -5.7 outer-membranne lipoprotein compare
SMc00614 -2.5 -2.9 phosphoribosylglycinamide formyltransferase compare
SMc00914 -2.5 -2.7 oxidoreductase compare
SMc01770 -2.5 -1.1 serine hydroxymethyltransferase compare
SMc01364 -2.5 -0.9 DNA topoisomerase I compare
SM_b21035 -2.4 -2.7 hypothetical protein compare
SMc03229 -2.3 -1.2 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
SMc04090 -2.3 -2.5 sun protein compare
SMc00941 -2.3 -1.2 hypothetical protein compare
SMc02307 -2.3 -5.4 histidinol dehydrogenase compare
SMc02425 -2.3 -3.1 transcriptional regulator compare
SMc03967 -2.3 -1.6 Holliday junction resolvase compare
SMc00012 -2.2 -1.3 cytochrome C oxidase assembly protein compare
SM_b20270 -2.2 -1.6 proline racemase compare
SMc02765 -2.2 -8.1 tryptophan synthase subunit alpha compare
SMc01502 -2.2 -3.7 hydrolase phosphatase compare
SMa1413 -2.1 -1.9 hypothetical protein compare
SMc02766 -2.1 -7.7 tryptophan synthase subunit beta compare
SMa1658 -2.1 -1.0 hypothetical protein compare
SMc01579 -2.1 -0.8 hypothetical protein compare
SMa2034 -2.1 -1.3 hypothetical protein compare
SMc02698 -2.1 -2.9 adenine phosphoribosyltransferase compare
SMc02029 -2.1 -2.2 peptide ABC transporter permease compare
SMc00826 -2.1 -2.5 16S ribosomal RNA methyltransferase RsmE compare
SMc03836 -2.0 -1.0 acyl-CoA thioesterase i protein compare
SMc02862 -2.0 -2.3 Pit accessory protein compare
SM_b20703 -2.0 -2.5 hypothetical protein compare
SMc00013 -2.0 -1.7 cytochrome C oxidase subunit III transmembrane protein compare
SMc01430 -2.0 -3.2 acetolactate synthase 3 regulatory subunit compare
SMc02859 -2.0 -2.2 hypothetical protein compare
SMc02856 -2.0 -5.2 penicillin-binding protein compare
SM_b20226 -1.9 -1.4 hypothetical protein compare
SMc02543 -1.9 -3.3 hypothetical protein compare
SMc00815 -1.9 -1.1 inosine 5'-monophosphate dehydrogenase compare
SM_b21332 -1.9 -3.1 hypothetical protein compare
SM_b20876 -1.9 -1.9 hypothetical protein compare
SM_b20143 -1.9 -0.8 oligopeptide ABC transporter permease compare
SMc01800 -1.9 -0.9 cytochrome C oxidase assembly transmembrane protein compare
SMc02247 -1.9 -0.7 signal peptide protein compare
SMc03949 -1.9 -3.2 nitrogen regulatory protein compare
SMc01768 -1.9 -1.8 transcriptional regulator compare
SMc02071 -1.8 -2.4 hydrolase glycosidase compare
SMa0955 -1.8 -1.1 GntR family transcriptional regulator compare
SMc00229 -1.8 -3.2 hypothetical protein compare
SM_b20563 -1.8 -1.9 hypothetical protein compare
SMc01144 -1.8 -2.4 ribonuclease PH compare
SMc02303 -1.8 -1.3 partial transposase for insertion sequence element ISRM1 compare
SM_b20955 -1.8 -2.5 endo-beta-1,3-1,4-glycanase compare
SMc03124 -1.8 -3.1 periplasmic binding ABC transporter protein compare
SMc05020 -1.8 -1.0 entericidin A precursor compare
SMc00296 -1.8 -5.3 POLY3-hydroxybutyrate polymerase compare
SM_b21479 -1.7 -1.1 hypothetical protein compare
SMa1878 -1.7 -2.4 transposase compare
SMc02786 -1.7 -6.3 translocase transmembrane protein compare
SMc04242 -1.7 -0.9 zinc uptake regulation protein compare
SMc00351 -1.7 -0.9 hypothetical protein compare
SMa0087 -1.7 -1.3 hypothetical protein compare
SMc04211 -1.7 -2.4 hypothetical protein compare
SMc02897 -1.7 -2.1 cytochrome C transmembrane protein compare
SM_b20746 -1.7 -0.8 hypothetical protein compare
SMc04224 -1.7 -0.8 hypothetical protein compare
SMc01813 -1.7 -2.6 hypothetical protein compare
SMc03068 -1.7 -3.9 phosphogluconate dehydratase compare
SMc01613 -1.7 -2.3 ribose-5-phosphate isomerase B compare
SMc00712 -1.7 -1.3 hypothetical protein compare
SMc01501 -1.7 -1.9 mannitol 2-dehydrogenase compare
SMc01427 -1.7 -0.9 hypothetical protein compare
SMc00045 -1.7 -1.1 cytochrome C signal peptide protein compare
SMc00420 -1.7 -2.9 hypothetical protein compare
SMc02172 -1.7 -5.1 transcriptional regulator compare
SMc01244 -1.6 -1.1 tRNA-Ala compare
SMc03878 -1.6 -2.0 acetoacetyl-CoA reductase compare
SMc04329 -1.6 -2.6 hypothetical protein compare
SMa0326 -1.6 -1.9 short chain alcohol dehydrogenase-related dehydrogenase compare
SMc05015 -1.6 -1.2 recombinase compare
SM_b20387 -1.6 -1.0 transcriptional regulator compare
SM_b20392 -1.6 -3.3 transcriptional regulator NanR compare
SMc01341 -1.6 -1.9 hypothetical protein compare


Specific Phenotypes

For 6 genes in this experiment

For nitrogen source L-Arginine in Sinorhizobium meliloti 1021

For nitrogen source L-Arginine across organisms