Experiment set3H42 for Pseudomonas stutzeri RCH2

Compare to:

LB with Sodium perchlorate monohydrate 25 mM

200 most important genes:

  gene name fitness t score description  
Psest_1492 -5.0 -6.0 DNA-binding ferritin-like protein (oxidative damage protectant) compare
Psest_0062 -4.0 -10.2 tryptophan synthase, alpha subunit compare
Psest_2104 -3.4 -4.6 IscR-regulated protein YhgI compare
Psest_0280 -3.3 -16.4 homoserine O-acetyltransferase compare
Psest_4274 -3.3 -4.4 hypothetical protein compare
Psest_0279 -3.2 -7.8 methionine biosynthesis protein MetW compare
Psest_1640 -3.0 -15.5 (p)ppGpp synthetase, RelA/SpoT family compare
Psest_0063 -3.0 -8.1 tryptophan synthase, beta subunit compare
Psest_0958 -2.8 -11.0 Oligoketide cyclase/lipid transport protein compare
Psest_0309 -2.7 -2.6 RND family efflux transporter, MFP subunit compare
Psest_2329 -2.6 -16.3 Transcriptional regulator compare
Psest_4219 -2.6 -1.7 DNA polymerase I compare
Psest_0182 -2.4 -8.1 glycine cleavage system H protein compare
Psest_3129 -2.4 -2.7 tyrosine recombinase XerD compare
Psest_1947 -2.2 -4.4 dihydroorotate dehydrogenase, subfamily 2 compare
Psest_3818 -2.1 -7.3 endoribonuclease L-PSP, putative compare
Psest_2578 -2.0 -12.3 O-succinylhomoserine sulfhydrylase compare
Psest_3092 -2.0 -2.6 ribonuclease III, bacterial compare
Psest_2229 -2.0 -3.9 Uncharacterized protein conserved in bacteria compare
Psest_3790 -2.0 -7.4 Cytochrome c5 compare
Psest_0998 -1.9 -4.3 poly(A) polymerase compare
Psest_3862 -1.9 -13.0 phosphoenolpyruvate-protein phosphotransferase compare
Psest_2532 -1.9 -5.2 Uncharacterized protein conserved in bacteria compare
Psest_3645 -1.9 -11.0 Predicted redox protein, regulator of disulfide bond formation compare
Psest_0867 -1.9 -2.1 hypothetical protein compare
Psest_3938 -1.8 -1.7 Uncharacterized protein conserved in bacteria compare
Psest_2530 -1.8 -6.9 cytochrome c oxidase, cbb3-type, subunit III compare
Psest_3317 -1.8 -5.9 Phosphotransferase System HPr (HPr) Family compare
Psest_2872 -1.8 -2.7 protein RecA compare
Psest_0097 -1.7 -1.5 phosphonates metabolism transcriptional regulator PhnF compare
Psest_3767 -1.7 -4.3 tyrosine recombinase XerC compare
Psest_2527 -1.7 -8.6 cytochrome c oxidase, cbb3-type, subunit I compare
Psest_2446 -1.7 -1.9 acetyl-CoA acetyltransferases compare
Psest_0028 -1.7 -3.4 Coproporphyrinogen III oxidase compare
Psest_3732 -1.7 -8.4 polyphosphate kinase 1 compare
Psest_2531 -1.6 -11.6 cytochrome c oxidase accessory protein FixG compare
Psest_1031 -1.5 -7.3 Uncharacterized protein conserved in bacteria compare
Psest_1496 -1.5 -1.0 Holliday junction DNA helicase, RuvA subunit compare
Psest_2714 -1.5 -2.4 7-cyano-7-deazaguanine reductase compare
Psest_0498 -1.5 -2.1 ribosome small subunit-dependent GTPase A compare
Psest_1656 -1.5 -3.0 NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit compare
Psest_4098 -1.4 -2.9 Superfamily I DNA and RNA helicases compare
Psest_3647 -1.4 -6.2 Indole-3-glycerol phosphate synthase compare
Psest_1661 -1.4 -2.9 Membrane-associated lipoprotein involved in thiamine biosynthesis compare
Psest_3810 -1.4 -3.4 orotate phosphoribosyltransferase compare
Psest_3123 -1.4 -3.5 dihydroorotase, homodimeric type compare
Psest_1292 -1.3 -7.4 monothiol glutaredoxin, Grx4 family compare
Psest_1143 -1.3 -5.5 Small-conductance mechanosensitive channel compare
Psest_3550 -1.3 -2.0 3,4-dihydroxy-2-butanone 4-phosphate synthase compare
Psest_1910 -1.3 -2.1 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase compare
Psest_1417 -1.3 -1.6 hypothetical protein compare
Psest_0310 -1.2 -2.8 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family compare
Psest_0259 -1.2 -2.1 cell division ATP-binding protein FtsE compare
Psest_0218 -1.2 -2.8 Acyl-CoA hydrolase compare
Psest_0417 -1.2 -3.4 Acyl-CoA dehydrogenases compare
Psest_3449 -1.2 -1.6 DJ-1 family protein compare
Psest_0144 -1.2 -6.2 Fe-S cluster protector protein compare
Psest_2000 -1.2 -4.8 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) compare
Psest_1659 -1.2 -2.7 NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit compare
Psest_3458 -1.1 -1.4 hypothetical protein compare
Psest_0164 -1.1 -1.2 Glutaredoxin, GrxC family compare
Psest_4256 -1.1 -1.7 ABC-type transport system involved in resistance to organic solvents, ATPase component compare
Psest_0738 -1.1 -3.9 copper-(or silver)-translocating P-type ATPase compare
Psest_3937 -1.1 -1.0 ATP-dependent protease HslVU, ATPase subunit compare
Psest_2651 -1.1 -3.4 DNA topoisomerase I, bacterial compare
Psest_0771 -1.1 -7.4 Acyl-CoA hydrolase compare
Psest_3031 -1.1 -1.3 hypothetical protein compare
Psest_1452 -1.0 -6.3 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase compare
Psest_1505 -1.0 -2.2 Organic radical activating enzymes compare
Psest_0175 -1.0 -4.7 Xaa-Pro aminopeptidase compare
Psest_2590 -1.0 -1.8 3-isopropylmalate dehydratase, small subunit compare
Psest_3351 -1.0 -5.0 peptide chain release factor 3 compare
Psest_0449 -1.0 -6.1 Glutamine synthetase adenylyltransferase compare
Psest_2232 -1.0 -7.0 UTP-glucose-1-phosphate uridylyltransferase compare
Psest_1657 -1.0 -1.6 NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit compare
Psest_0508 -1.0 -4.4 gamma-glutamyl phosphate reductase compare
Psest_1510 -1.0 -3.6 Putative Zn-dependent protease, contains TPR repeats compare
Psest_2088 -1.0 -1.5 Uncharacterized protein conserved in bacteria compare
Psest_2447 -1.0 -1.1 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) compare
Psest_3936 -1.0 -1.9 ATP-dependent protease HslVU, peptidase subunit compare
Psest_0542 -1.0 -4.5 AMP nucleosidase compare
Psest_0740 -0.9 -1.7 Transcriptional regulator compare
Psest_1111 -0.9 -2.8 Flp pilus assembly protein TadD, contains TPR repeats compare
Psest_2809 -0.9 -2.8 protein-L-isoaspartate(D-aspartate) O-methyltransferase compare
Psest_3883 -0.9 -3.9 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain compare
Psest_0697 -0.9 -3.5 ribosomal protein L9 compare
Psest_1295 -0.9 -5.0 Aspartate/tyrosine/aromatic aminotransferase compare
Psest_2670 -0.9 -2.2 Uncharacterized conserved protein compare
Psest_2018 -0.9 -3.4 Uncharacterized conserved protein compare
Psest_1804 -0.9 -2.6 Superfamily II DNA and RNA helicases compare
Psest_2240 -0.9 -1.5 hypothetical protein compare
Psest_4315 -0.9 -1.5 ABC-type metal ion transport system, permease component compare
Psest_2855 -0.9 -0.9 Outer membrane protein and related peptidoglycan-associated (lipo)proteins compare
Psest_4078 -0.9 -1.7 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D compare
Psest_1639 -0.9 -2.9 23S rRNA (uracil-5-)-methyltransferase RumA compare
Psest_2845 -0.9 -6.0 [Protein-PII] uridylyltransferase compare
Psest_1012 -0.9 -3.4 Signal transduction histidine kinase compare
Psest_2454 -0.9 -1.9 Rhodanese-related sulfurtransferase compare
Psest_3697 -0.8 -0.9 Outer membrane lipoprotein carrier protein LolA. compare
Psest_3159 -0.8 -4.3 phosphoribosylformylglycinamidine synthase, single chain form compare
Psest_1516 -0.8 -2.1 Uncharacterized lipoprotein compare
Psest_0691 -0.8 -6.2 ribonuclease R compare
Psest_3007 -0.8 -2.7 Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase compare
Psest_1704 -0.8 -1.6 Dehydrogenases (flavoproteins) compare
Psest_0066 -0.8 -1.0 Protein of unknown function (DUF3060). compare
Psest_1805 -0.8 -2.3 integration host factor, beta subunit compare
Psest_1625 -0.8 -2.6 hypothetical protein compare
Psest_4052 -0.8 -2.5 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component compare
Psest_2001 -0.8 -2.4 2-phosphoglycolate phosphatase, prokaryotic compare
Psest_1235 -0.8 -4.2 Leucyl aminopeptidase compare
Psest_2067 -0.8 -1.1 ABC-type oligopeptide transport system, periplasmic component compare
Psest_2584 -0.8 -3.1 Phosphoribosylanthranilate isomerase compare
Psest_0313 -0.8 -2.7 5,10-methylenetetrahydrofolate reductase, prokaryotic form compare
Psest_1655 -0.7 -2.9 NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit compare
Psest_2946 -0.7 -2.9 septum site-determining protein MinD compare
Psest_1249 -0.7 -4.5 serine O-acetyltransferase compare
Psest_3824 -0.7 -1.6 Predicted membrane protein compare
Psest_4191 -0.7 -1.4 Transcriptional regulator compare
Psest_4151 -0.7 -1.7 Flagellar hook capping protein compare
Psest_3100 -0.7 -5.4 RNA polymerase sigma factor RpoE compare
Psest_2011 -0.7 -4.6 Predicted permease compare
Psest_1653 -0.7 -5.6 transcription-repair coupling factor (mfd) compare
Psest_1267 -0.7 -5.0 serine O-acetyltransferase compare
Psest_0489 -0.7 -1.9 phosphoserine phosphatase SerB compare
Psest_0243 -0.7 -0.5 hypothetical protein compare
Psest_0673 -0.7 -2.9 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase compare
Psest_3910 -0.7 -1.0 Uncharacterized protein conserved in bacteria compare
Psest_2810 -0.7 -2.7 5'/3'-nucleotidase SurE compare
Psest_1308 -0.7 -3.1 ABC-type branched-chain amino acid transport systems, ATPase component compare
Psest_0359 -0.7 -1.5 Transcriptional regulators compare
Psest_4303 -0.7 -0.8 HEAT repeat. compare
Psest_0650 -0.7 -1.8 RNA polymerase sigma factor, sigma-70 family compare
Psest_2945 -0.7 -1.3 septum site-determining protein MinC compare
Psest_1013 -0.7 -2.2 phosphoribosylamine--glycine ligase compare
Psest_1195 -0.7 -1.6 xanthine permease compare
Psest_3692 -0.7 -1.3 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases compare
Psest_4273 -0.7 -4.7 Lysophospholipase compare
Psest_3384 -0.7 -4.1 glutamate 5-kinase compare
Psest_1227 -0.7 -1.5 Predicted SAM-dependent methyltransferase compare
Psest_1974 -0.7 -1.9 integration host factor, alpha subunit compare
Psest_0722 -0.7 -4.2 Predicted ATPase compare
Psest_2907 -0.7 -1.0 Protein of unknown function (DUF3618). compare
Psest_0718 -0.7 -2.5 nicotinate-nucleotide pyrophosphorylase compare
Psest_0950 -0.7 -2.6 hypothetical protein compare
Psest_0312 -0.7 -2.6 Superfamily II DNA and RNA helicases compare
Psest_0227 -0.7 -0.8 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific compare
Psest_0970 -0.7 -1.8 hypothetical protein compare
Psest_1631 -0.7 -1.0 Uncharacterized conserved small protein compare
Psest_3777 -0.6 -1.6 diguanylate cyclase (GGDEF) domain compare
Psest_2622 -0.6 -1.3 TadE-like protein. compare
Psest_4095 -0.6 -1.8 Uncharacterized protein conserved in bacteria compare
Psest_0311 -0.6 -2.2 efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family compare
Psest_0174 -0.6 -3.0 Uncharacterized protein conserved in bacteria compare
Psest_1991 -0.6 -4.6 Glutathione S-transferase compare
Psest_0101 -0.6 -2.1 Short-chain alcohol dehydrogenase of unknown specificity compare
Psest_3960 -0.6 -1.0 3'(2'),5'-bisphosphate nucleotidase, bacterial compare
Psest_0853 -0.6 -1.6 6-phosphogluconolactonase compare
Psest_2950 -0.6 -3.5 putative NAD(P)H quinone oxidoreductase, PIG3 family compare
Psest_1306 -0.6 -1.4 hypothetical protein compare
Psest_2448 -0.6 -1.9 AraC-type DNA-binding domain-containing proteins compare
Psest_0959 -0.6 -2.1 Uncharacterized protein conserved in bacteria compare
Psest_0639 -0.6 -2.5 Uncharacterised protein family (UPF0259). compare
Psest_1200 -0.6 -3.1 putative urate catabolism protein compare
Psest_2923 -0.6 -1.3 hypothetical protein compare
Psest_1509 -0.6 -3.6 quinolinate synthetase complex, A subunit compare
Psest_3172 -0.6 -3.1 cation diffusion facilitator family transporter compare
Psest_2260 -0.6 -5.4 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain compare
Psest_1480 -0.6 -2.2 arsenate reductase (glutaredoxin) compare
Psest_3684 -0.6 -3.8 Di- and tricarboxylate transporters compare
Psest_1293 -0.6 -1.4 VanZ like family. compare
Psest_3212 -0.6 -2.7 FKBP-type peptidyl-prolyl cis-trans isomerases 2 compare
Psest_1525 -0.6 -3.0 Uncharacterized protein conserved in bacteria compare
Psest_2988 -0.6 -3.5 aspartate kinase, monofunctional class compare
Psest_4143 -0.6 -3.1 flagellar hook-associated protein 3 compare
Psest_3554 -0.6 -1.0 Uncharacterized protein conserved in bacteria compare
Psest_1855 -0.6 -4.2 cysteine synthase A compare
Psest_1284 -0.6 -2.4 exodeoxyribonuclease VII, large subunit compare
Psest_1322 -0.6 -1.2 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases compare
Psest_4305 -0.6 -1.9 NAD-dependent aldehyde dehydrogenases compare
Psest_1842 -0.6 -3.9 Chemotaxis signal transduction protein compare
Psest_0161 -0.6 -1.0 Membrane-bound metallopeptidase compare
Psest_3339 -0.6 -3.2 Signal transduction histidine kinase compare
Psest_0325 -0.6 -4.7 Putative threonine efflux protein compare
Psest_2748 -0.6 -1.5 Transcriptional regulator compare
Psest_0842 -0.6 -1.4 anaerobic ribonucleoside-triphosphate reductase activating protein compare
Psest_4307 -0.6 -1.6 ABC-type Zn2+ transport system, periplasmic component/surface adhesin compare
Psest_1635 -0.6 -4.7 Signal transduction histidine kinase compare
Psest_1646 -0.6 -3.0 Predicted ICC-like phosphoesterases compare
Psest_3401 -0.6 -3.0 DNA repair protein RadA compare
Psest_1677 -0.6 -1.3 Protein-tyrosine-phosphatase compare
Psest_0687 -0.6 -3.4 ATP phosphoribosyltransferase, regulatory subunit compare
Psest_1849 -0.6 -3.3 Predicted glutamine amidotransferase compare
Psest_2133 -0.6 -4.1 Uncharacterized protein conserved in bacteria compare
Psest_0696 -0.6 -2.9 hypothetical protein compare
Psest_2475 -0.6 -3.3 Acyl-CoA dehydrogenases compare
Psest_2369 -0.6 -2.3 Transcriptional regulator compare
Psest_3914 -0.6 -2.7 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) compare
Psest_3118 -0.5 -3.4 endonuclease III compare
Psest_0014 -0.5 -2.0 PilZ domain. compare
Psest_1468 -0.5 -2.3 hypothetical protein compare


Specific Phenotypes

For 1 genes in this experiment

For stress Sodium perchlorate monohydrate in Pseudomonas stutzeri RCH2

For stress Sodium perchlorate monohydrate across organisms