Experiment set3H41 for Dechlorosoma suillum PS

Compare to:

Anaerobic growth in rich media with perchlorate electron acceptor, 100 uM Stressor (H2S)

200 most important genes:

  gene name fitness t score description  
Dsui_0469 -1.2 -1.2 lipopolysaccharide heptosyltransferase III, putative compare
Dsui_1970 -1.2 -1.4 metalloendopeptidase-like membrane protein compare
Dsui_1445 -1.2 -1.1 succinyl-CoA synthetase, beta subunit compare
Dsui_0267 -1.1 -1.7 multidrug resistance efflux pump compare
Dsui_2717 -1.1 -0.7 RNA polymerase-binding protein DksA compare
Dsui_2927 -1.1 -1.7 cell wall-associated hydrolase, invasion-associated protein compare
Dsui_1576 -1.1 -0.7 dihydrolipoamide dehydrogenase compare
Dsui_3080 -1.0 -0.3 molecular chaperone GrpE (heat shock protein) compare
Dsui_3478 -0.9 -1.5 hypothetical protein compare
Dsui_2540 -0.9 -1.9 ribosomal protein S12 methylthiotransferase RimO compare
Dsui_1400 -0.8 -1.9 ABC-type transport system involved in resistance to organic solvents, periplasmic component compare
Dsui_1955 -0.8 -1.0 3'-5' exonuclease compare
Dsui_1401 -0.8 -2.0 surface lipoprotein compare
Dsui_3531 -0.8 -1.7 Protein of unknown function (DUF3619) compare
Dsui_2277 -0.7 -2.0 Rhs element Vgr protein compare
Dsui_2196 -0.7 -1.3 ATP-dependent Clp protease, proteolytic subunit ClpP compare
Dsui_2826 -0.7 -0.8 hypothetical protein compare
Dsui_1356 -0.7 -1.4 hypothetical protein compare
Dsui_0650 -0.7 -2.8 hypothetical protein compare
Dsui_1620 -0.7 -1.7 PAP2 (acid phosphatase) superfamily protein compare
Dsui_2180 -0.6 -1.6 hypothetical protein compare
Dsui_0745 -0.6 -1.9 membrane-associated lipoprotein involved in thiamine biosynthesis compare
Dsui_3240 -0.6 -1.4 cobalamin biosynthesis protein cobD/CbiB compare
Dsui_0477 -0.6 -1.5 tol-pal system protein YbgF compare
Dsui_2702 -0.6 -2.5 cell division protein compare
Dsui_2805 -0.6 -2.1 EamA-like transporter family compare
Dsui_0434 -0.6 -0.9 ribonuclease, Rne/Rng family compare
Dsui_0742 -0.6 -3.9 phosphoenolpyruvate-protein phosphotransferase compare
Dsui_3130 -0.6 -0.8 tRNA-Leu compare
Dsui_2556 -0.6 -1.9 hypothetical protein compare
Dsui_0675 -0.5 -2.1 putative dithiol-disulfide isomerase involved in polyketide biosynthesis compare
Dsui_1821 -0.5 -2.9 esterase/lipase compare
Dsui_0260 -0.5 -2.0 sulfate ABC transporter, permease protein CysT compare
Dsui_2704 -0.5 -1.4 yecA family protein compare
Dsui_2870 -0.5 -1.6 putative permease compare
Dsui_0641 -0.5 -1.7 putative rRNA methylase compare
Dsui_0725 -0.5 -1.3 putative hydrolase of the alpha/beta superfamily compare
Dsui_1978 -0.5 -0.3 putative lipoprotein compare
Dsui_0600 -0.5 -0.7 TIGR00251 family protein compare
Dsui_1235 -0.5 -2.2 hypothetical protein compare
Dsui_1661 -0.5 -2.5 hypothetical protein compare
Dsui_2153 -0.5 -3.4 molybdopterin converting factor, subunit 1 compare
Dsui_2496 -0.5 -0.9 Membrane transport protein MerF compare
Dsui_0901 -0.5 -1.0 hypothetical protein compare
Dsui_2143 -0.5 -1.8 hypothetical protein compare
Dsui_2640 -0.5 -1.3 Cytochrome c compare
Dsui_2607 -0.5 -0.5 hypothetical protein compare
Dsui_0269 -0.5 -0.7 ABC-type multidrug transport system, permease component compare
Dsui_3251 -0.5 -2.1 ATPase involved in chromosome partitioning compare
Dsui_0006 -0.5 -3.4 sulfur oxidation protein SoxZ compare
Dsui_2150 -0.5 -2.3 hypothetical protein compare
Dsui_0743 -0.5 -1.9 phosphotransferase system HPr (HPr) family protein compare
Dsui_3026 -0.5 -1.0 hydrogenase maturation protease compare
Dsui_0593 -0.5 -1.5 putative transcriptional regulator compare
Dsui_2443 -0.5 -0.4 putative metal-binding protein, possibly nucleic-acid binding protein compare
Dsui_3168 -0.5 -2.0 hypothetical protein compare
Dsui_2631 -0.5 -0.8 hypothetical protein compare
Dsui_1170 -0.5 -0.6 heme exporter protein CcmD compare
Dsui_1446 -0.5 -0.5 succinyl-CoA synthetase, alpha subunit compare
Dsui_1759 -0.5 -1.4 flagellar hook-basal body complex protein FliE compare
Dsui_0577 -0.5 -1.6 Nitrogen fixation protein NifW compare
Dsui_2676 -0.5 -1.6 putative membrane protein compare
Dsui_0116 -0.4 -1.5 alkylhydroperoxidase AhpD family core domain protein compare
Dsui_2582 -0.4 -1.9 hypothetical protein compare
Dsui_0395 -0.4 -1.0 outer membrane lipoprotein compare
Dsui_3319 -0.4 -2.2 uroporphyrin-III C-methyltransferase compare
Dsui_2080 -0.4 -1.4 response regulator compare
Dsui_1688 -0.4 -1.5 hypothetical protein compare
Dsui_1096 -0.4 -1.8 glutamate synthase family protein compare
Dsui_2551 -0.4 -1.7 Helix-destabilising protein compare
Dsui_0252 -0.4 -1.2 TIGR00252 family protein compare
Dsui_2883 -0.4 -1.9 biotin biosynthesis protein BioC compare
Dsui_2424 -0.4 -1.1 hypothetical protein compare
Dsui_2902 -0.4 -0.6 hypothetical protein compare
Dsui_1649 -0.4 -1.0 universal stress protein UspA-like protein compare
Dsui_1098 -0.4 -1.8 hypothetical protein compare
Dsui_2911 -0.4 -1.1 cation/cationic drug transporter compare
Dsui_2275 -0.4 -1.3 putative transcriptional regulator compare
Dsui_1529 -0.4 -2.0 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_1049 -0.4 -1.5 hypothetical protein compare
Dsui_2947 -0.4 -1.9 putative metal-dependent hydrolase compare
Dsui_2539 -0.4 -1.5 polyhydroxyalkanoate synthesis repressor PhaR compare
Dsui_1947 -0.4 -0.2 nucleotide sugar dehydrogenase compare
Dsui_2687 -0.4 -1.4 RIP metalloprotease RseP compare
Dsui_2740 -0.4 -1.4 putative integral membrane protein compare
Dsui_2259 -0.4 -0.8 hypothetical protein compare
Dsui_1495 -0.4 -1.1 molecular chaperone (small heat shock protein) compare
Dsui_0044 -0.4 -1.6 exodeoxyribonuclease III compare
Dsui_1515 -0.4 -1.0 poly(A) polymerase compare
Dsui_1969 -0.4 -1.8 protein-L-isoaspartate and D-aspartate O-methyltransferase compare
Dsui_2497 -0.4 -1.5 mercuric reductase compare
Dsui_0196 -0.4 -2.1 hypothetical protein compare
Dsui_3291 -0.4 -1.2 hypothetical protein compare
Dsui_0543 -0.4 -1.2 malic enzyme compare
Dsui_1409 -0.4 -1.6 cation diffusion facilitator family transporter compare
Dsui_2571 -0.4 -1.8 hypothetical protein compare
Dsui_2877 -0.4 -1.5 ABC-type antimicrobial peptide transport system, ATPase component compare
Dsui_0476 -0.4 -1.1 organic radical activating enzyme compare
Dsui_2817 -0.4 -1.4 DMT(drug/metabolite transporter) superfamily permease compare
Dsui_2632 -0.4 -1.1 hypothetical protein compare
Dsui_1008 -0.4 -2.6 Uncharacterized protein conserved in bacteria (DUF2242) compare
Dsui_1615 -0.4 -1.3 hypothetical protein compare
Dsui_2172 -0.4 -1.1 transcriptional regulator compare
Dsui_0500 -0.4 -0.9 (p)ppGpp synthetase, RelA/SpoT family compare
Dsui_1304 -0.4 -0.7 cytochrome c553 compare
Dsui_0022 -0.4 -1.8 hypothetical protein compare
Dsui_0507 -0.4 -1.3 uncharacterized protein involved in formation of periplasmic nitrate reductase compare
Dsui_1875 -0.4 -1.5 hypothetical protein compare
Dsui_2027 -0.4 -1.9 efflux transporter, outer membrane factor lipoprotein, NodT family compare
Dsui_2802 -0.3 -1.4 flavoprotein, HI0933 family/uncharacterized flavoprotein, PP_4765 family compare
Dsui_2620 -0.3 -1.8 hypothetical protein compare
Dsui_3389 -0.3 -1.4 enoyl-CoA hydratase/carnithine racemase compare
Dsui_2599 -0.3 -0.6 hypothetical protein compare
Dsui_0871 -0.3 -0.8 hypothetical protein compare
Dsui_1393 -0.3 -1.0 type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB compare
Dsui_0457 -0.3 -0.7 Protein of unknown function (DUF2782) compare
Dsui_2768 -0.3 -1.6 uncharacterized protein involved in outer membrane biogenesis compare
Dsui_2341 -0.3 -1.2 ABC-type multidrug transport system, ATPase component compare
Dsui_1771 -0.3 -1.5 hypothetical protein compare
Dsui_3008 -0.3 -1.8 hydrogenase expression/formation protein compare
Dsui_3114 -0.3 -1.2 heme/copper-type cytochrome/quinol oxidase, subunit 3 compare
Dsui_1832 -0.3 -1.8 nitrate ABC transporter, permease protein compare
Dsui_0270 -0.3 -1.4 transcriptional regulator compare
Dsui_0248 -0.3 -2.0 Protein of unknown function (DUF3025) compare
Dsui_0631 -0.3 -1.2 cytochrome c551/c552 compare
Dsui_0575 -0.3 -1.7 electron transfer flavoprotein, alpha subunit compare
Dsui_2720 -0.3 -1.5 tRNA pseudouridine 55 synthase compare
Dsui_2758 -0.3 -1.6 putative SAM-dependent methyltransferase compare
Dsui_0572 -0.3 -1.5 hypothetical protein compare
Dsui_2707 -0.3 -1.1 putative permease compare
Dsui_0123 -0.3 -1.7 hypothetical protein compare
Dsui_2748 -0.3 -0.8 hypothetical protein compare
Dsui_1540 -0.3 -1.7 NAD(FAD)-dependent dehydrogenase compare
Dsui_1591 -0.3 -1.1 Xaa-Pro aminopeptidase compare
Dsui_1211 -0.3 -1.2 hypothetical protein compare
Dsui_2323 -0.3 -1.5 protein of unknown function (DUF1857) compare
Dsui_2377 -0.3 -0.9 FeS assembly protein IscX compare
Dsui_1377 -0.3 -2.1 phasin family protein compare
Dsui_0289 -0.3 -1.0 putative membrane protein compare
Dsui_1690 -0.3 -1.8 cAMP-binding protein compare
Dsui_1433 -0.3 -1.0 chemotaxis protein compare
Dsui_1656 -0.3 -2.1 hypothetical protein compare
Dsui_2560 -0.3 -0.6 zonula occludens toxin compare
Dsui_2576 -0.3 -1.0 hypothetical protein compare
Dsui_1707 -0.3 -2.2 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_0571 -0.3 -1.2 ferredoxin compare
Dsui_1600 -0.3 -1.4 putative enzyme of heme biosynthesis compare
Dsui_0548 -0.3 -1.3 putative transporter component compare
Dsui_1645 -0.3 -1.5 hemerythrin HHE cation binding domain-containing protein compare
Dsui_3536 -0.3 -1.1 leucyl aminopeptidase compare
Dsui_0885 -0.3 -1.1 hypothetical protein compare
Dsui_2878 -0.3 -1.7 ABC-type antimicrobial peptide transport system, permease component compare
Dsui_1811 -0.3 -1.3 recombination protein RecR compare
Dsui_2820 -0.3 -1.5 putative hydrolase or acyltransferase of alpha/beta superfamily compare
Dsui_2085 -0.3 -1.6 NADPH-dependent FMN reductase compare
Dsui_2639 -0.3 -0.7 putative metal-binding protein compare
Dsui_1276 -0.3 -0.9 hypothetical protein compare
Dsui_0314 -0.3 -2.1 cell division protein compare
Dsui_2024 -0.3 -1.5 esterase/lipase compare
Dsui_2937 -0.3 -2.1 NAD/NADP transhydrogenase beta subunit compare
Dsui_2697 -0.3 -1.2 peptide deformylase compare
Dsui_2429 -0.3 -1.3 putative permease compare
Dsui_2773 -0.3 -1.2 putative enzyme involved in biosynthesis of extracellular polysaccharides compare
Dsui_0278 -0.3 -1.4 K+-transporting ATPase, B subunit compare
Dsui_1225 -0.3 -2.3 sporulation related protein compare
Dsui_2072 -0.3 -1.1 Pirin-related protein compare
Dsui_2243 -0.3 -0.7 hypothetical protein compare
Dsui_1325 -0.3 -0.8 ADP-ribose pyrophosphatase compare
Dsui_3463 -0.3 -1.4 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component compare
Dsui_0487 -0.3 -1.9 hemerythrin HHE cation binding domain-containing protein compare
Dsui_1662 -0.3 -1.2 Oxidoreductase NAD-binding domain/Flavodoxin compare
Dsui_2756 -0.3 -0.5 hypothetical protein compare
Dsui_2601 -0.3 -0.8 hypothetical protein compare
Dsui_2712 -0.3 -1.4 protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific compare
Dsui_1897 -0.3 -0.9 hypothetical protein compare
Dsui_2367 -0.3 -1.3 RNA methyltransferase, TrmH family, group 1 compare
Dsui_1160 -0.3 -1.0 hydrogenase assembly chaperone HypC/HupF compare
Dsui_1159 -0.3 -1.7 hydrogenase expression/formation protein HypD compare
Dsui_0025 -0.3 -1.7 hypothetical protein compare
Dsui_0417 -0.3 -1.3 gamma-glutamyltransferase compare
Dsui_1229 -0.3 -1.1 Zn-dependent oxidoreductase, NADPH:quinone reductase compare
Dsui_1846 -0.3 -1.3 outer membrane phospholipase A compare
Dsui_0971 -0.3 -1.7 poly(R)-hydroxyalkanoic acid synthase, class I compare
Dsui_2386 -0.3 -1.5 pyruvate-formate lyase-activating enzyme compare
Dsui_1180 -0.3 -1.5 response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain protein compare
Dsui_1109 -0.3 -1.3 ABC-type branched-chain amino acid transport systems, ATPase component compare
Dsui_2713 -0.3 -1.2 membrane protease subunit, stomatin/prohibitin compare
Dsui_3117 -0.3 -1.4 hypothetical protein compare
Dsui_1869 -0.3 -1.7 hypothetical protein compare
Dsui_2586 -0.3 -0.7 type IV secretory pathway, VirB9 component compare
Dsui_1104 -0.3 -1.5 putative thioesterase compare
Dsui_0935 -0.3 -0.3 cytochrome c5 compare
Dsui_3469 -0.3 -1.1 response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain compare
Dsui_2042 -0.3 -1.0 cystathionine beta-lyase/cystathionine gamma-synthase compare
Dsui_2921 -0.3 -1.3 isochorismate synthase family protein compare
Dsui_0738 -0.3 -0.8 secondary thiamine-phosphate synthase enzyme compare
Dsui_0220 -0.3 -1.9 2-phosphoglycolate phosphatase compare
Dsui_0606 -0.3 -1.6 putative N6-adenine-specific DNA methylase compare
Dsui_2329 -0.3 -1.5 putative dehydrogenase compare
Dsui_2769 -0.3 -1.8 large extracellular alpha-helical protein compare


Specific Phenotypes

None in this experiment

For Dechlorosoma suillum PS in anaerobic experiments

For anaerobic Sodium perchlorate monohydrate across organisms