Experiment set3H40 for Pseudomonas stutzeri RCH2

Compare to:

LB with Sodium Chlorate 75 mM

200 most important genes:

  gene name fitness t score description  
Psest_2304 -4.6 -1.3 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family compare
Psest_2590 -4.0 -1.2 3-isopropylmalate dehydratase, small subunit compare
Psest_1958 -3.9 -4.4 Glutaredoxin-like domain (DUF836). compare
Psest_1008 -3.9 -1.1 hypothetical protein compare
Psest_2786 -3.7 -1.1 Domain of unknown function (DUF3597). compare
Psest_1065 -3.4 -1.7 hypothetical protein compare
Psest_2532 -3.4 -2.3 Uncharacterized protein conserved in bacteria compare
Psest_4043 -3.3 -3.0 Site-specific recombinases, DNA invertase Pin homologs compare
Psest_2000 -3.2 -3.1 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) compare
Psest_2712 -3.2 -2.2 Surface lipoprotein compare
Psest_2975 -3.2 -3.0 tRNA_Arg_CCT compare
Psest_2531 -3.1 -7.0 cytochrome c oxidase accessory protein FixG compare
Psest_0062 -3.1 -3.7 tryptophan synthase, alpha subunit compare
Psest_1491 -3.1 -3.6 Cold shock proteins compare
Psest_0440 -3.0 -3.3 hypothetical protein compare
Psest_2718 -3.0 -1.5 hypothetical protein compare
Psest_0060 -2.9 -1.4 Predicted Fe-S protein compare
Psest_2324 -2.9 -11.8 hypothetical protein compare
Psest_3647 -2.8 -4.7 Indole-3-glycerol phosphate synthase compare
Psest_1871 -2.8 -7.5 Predicted esterase of the alpha-beta hydrolase superfamily compare
Psest_1492 -2.8 -1.9 DNA-binding ferritin-like protein (oxidative damage protectant) compare
Psest_3367 -2.8 -1.1 translation initation factor SUI1, putative, prokaryotic compare
Psest_2847 -2.8 -3.7 Multisubunit Na+/H+ antiporter, MnhF subunit compare
Psest_0952 -2.7 -2.6 Uncharacterized conserved protein compare
Psest_3648 -2.7 -5.2 anthranilate phosphoribosyltransferase compare
Psest_2566 -2.7 -0.8 Uncharacterized protein conserved in bacteria compare
Psest_1354 -2.7 -1.1 Uncharacterized protein conserved in bacteria compare
Psest_2911 -2.7 -1.3 Protein of unknown function (DUF2945). compare
Psest_2517 -2.6 -2.3 hypothetical protein compare
Psest_0655 -2.6 -1.1 Chemotaxis signal transduction protein compare
Psest_1322 -2.6 -1.2 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases compare
Psest_4298 -2.6 -0.7 Response regulator containing a CheY-like receiver domain and a GGDEF domain compare
Psest_1238 -2.5 -5.3 Predicted membrane protein/domain compare
Psest_1724 -2.5 -2.6 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) compare
Psest_2526 -2.5 -5.6 cytochrome c oxidase, cbb3-type, subunit III compare
Psest_3307 -2.5 -3.8 ABC-type transport system involved in resistance to organic solvents, ATPase component compare
Psest_2018 -2.5 -1.7 Uncharacterized conserved protein compare
Psest_4335 -2.5 -2.4 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems compare
Psest_3306 -2.5 -2.4 conserved hypothetical integral membrane protein compare
Psest_0181 -2.4 -5.9 glycine cleavage system T protein compare
Psest_0346 -2.4 -1.7 small component of pyruvate/D-alanine transporter (TIGR03647) (from data) compare
Psest_0958 -2.4 -4.9 Oligoketide cyclase/lipid transport protein compare
Psest_1480 -2.4 -2.5 arsenate reductase (glutaredoxin) compare
Psest_2527 -2.4 -3.7 cytochrome c oxidase, cbb3-type, subunit I compare
Psest_0708 -2.4 -1.4 outer membrane assembly lipoprotein YfiO compare
Psest_2483 -2.4 -3.5 Predicted redox protein, regulator of disulfide bond formation compare
Psest_3766 -2.4 -1.6 Uncharacterized protein conserved in bacteria compare
Psest_1161 -2.4 -1.6 E3 Ubiquitin ligase. compare
Psest_3761 -2.4 -1.6 Transcription elongation factor compare
Psest_3247 -2.4 -1.6 Uncharacterized membrane protein compare
Psest_4274 -2.3 -1.6 hypothetical protein compare
Psest_2584 -2.3 -4.7 Phosphoribosylanthranilate isomerase compare
Psest_1293 -2.3 -1.3 VanZ like family. compare
Psest_1295 -2.3 -4.4 Aspartate/tyrosine/aromatic aminotransferase compare
Psest_2525 -2.3 -2.7 cytochrome c oxidase, cbb3-type, subunit II compare
Psest_2333 -2.3 -0.9 Protein of unknown function (DUF3359). compare
Psest_2282 -2.2 -2.9 Dihydroorotate dehydrogenase compare
Psest_1860 -2.2 -2.0 Uncharacterized conserved protein compare
Psest_1505 -2.2 -1.4 Organic radical activating enzymes compare
Psest_1516 -2.2 -2.6 Uncharacterized lipoprotein compare
Psest_1509 -2.2 -6.9 quinolinate synthetase complex, A subunit compare
Psest_2229 -2.2 -2.0 Uncharacterized protein conserved in bacteria compare
Psest_2017 -2.2 -4.2 Predicted acyltransferase compare
Psest_2906 -2.1 -2.5 tRNA_Thr_CGT compare
Psest_2530 -2.1 -2.0 cytochrome c oxidase, cbb3-type, subunit III compare
Psest_2325 -2.1 -5.0 alpha-L-glutamate ligase-related protein compare
Psest_3421 -2.0 -3.5 hypothetical protein compare
Psest_0355 -2.0 -1.4 Glycine cleavage system regulatory protein compare
Psest_2648 -2.0 -1.9 hypothetical protein compare
Psest_3305 -2.0 -3.6 ABC-type transport system involved in resistance to organic solvents, periplasmic component compare
Psest_3303 -2.0 -3.3 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) compare
Psest_2293 -1.9 -1.1 hypothetical protein compare
Psest_2253 -1.9 -2.2 small redox-active disulfide protein 2 compare
Psest_4078 -1.9 -1.3 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D compare
Psest_0013 -1.9 -7.6 Lauroyl/myristoyl acyltransferase compare
Psest_0722 -1.9 -4.1 Predicted ATPase compare
Psest_4082 -1.9 -2.6 hypothetical protein compare
Psest_0063 -1.9 -2.3 tryptophan synthase, beta subunit compare
Psest_3413 -1.9 -3.0 hypothetical protein compare
Psest_2907 -1.9 -0.7 Protein of unknown function (DUF3618). compare
Psest_0697 -1.9 -3.1 ribosomal protein L9 compare
Psest_1473 -1.9 -6.1 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent compare
Psest_2061 -1.9 -3.6 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain compare
Psest_1444 -1.8 -2.5 Curli production assembly/transport component CsgF. compare
Psest_3838 -1.8 -1.3 Uncharacterized protein, possibly involved in utilization of glycolate and propanediol compare
Psest_2980 -1.8 -8.7 oxaloacetate decarboxylase alpha subunit compare
Psest_1643 -1.8 -0.7 hypothetical protein compare
Psest_0503 -1.8 -1.0 Acyl dehydratase compare
Psest_1510 -1.8 -2.7 Putative Zn-dependent protease, contains TPR repeats compare
Psest_0309 -1.8 -0.9 RND family efflux transporter, MFP subunit compare
Psest_2850 -1.8 -1.0 Multisubunit Na+/H+ antiporter, MnhC subunit compare
Psest_2864 -1.8 -3.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain compare
Psest_0789 -1.8 -3.2 hypothetical protein compare
Psest_1567 -1.8 -2.7 Transcriptional regulator compare
Psest_3435 -1.8 -5.4 hypothetical protein compare
Psest_1997 -1.7 -1.7 6-phosphogluconolactonase compare
Psest_3123 -1.7 -2.6 dihydroorotase, homodimeric type compare
Psest_2486 -1.7 -3.1 Uncharacterized protein, possibly involved in aromatic compounds catabolism compare
Psest_0759 -1.7 -0.8 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT). compare
Psest_1259 -1.7 -4.2 23S rRNA m2A2503 methyltransferase compare
Psest_4287 -1.7 -4.5 Predicted glutamine amidotransferases compare
Psest_3140 -1.7 -5.1 NTP pyrophosphohydrolases including oxidative damage repair enzymes compare
Psest_0218 -1.7 -1.6 Acyl-CoA hydrolase compare
Psest_2976 -1.7 -1.4 hypothetical protein compare
Psest_3995 -1.7 -1.1 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain compare
Psest_3962 -1.7 -0.9 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED compare
Psest_2545 -1.7 -2.1 recombination protein RecR compare
Psest_4044 -1.7 -4.2 type I site-specific deoxyribonuclease, HsdR family compare
Psest_2323 -1.6 -6.5 Uncharacterized protein conserved in archaea compare
Psest_0260 -1.6 -0.9 Cell division protein compare
Psest_3853 -1.6 -1.6 ABC-type branched-chain amino acid transport systems, ATPase component compare
Psest_2001 -1.6 -2.1 2-phosphoglycolate phosphatase, prokaryotic compare
Psest_3650 -1.6 -7.7 anthranilate synthase component I, non-proteobacterial lineages compare
Psest_2273 -1.6 -4.3 coenzyme PQQ biosynthesis protein B compare
Psest_3110 -1.6 -4.5 Enoyl-CoA hydratase/carnithine racemase compare
Psest_3172 -1.6 -3.8 cation diffusion facilitator family transporter compare
Psest_2678 -1.6 -3.7 Predicted protein-disulfide isomerase compare
Psest_0922 -1.6 -2.0 alkylhydroperoxidase AhpD family core domain compare
Psest_3118 -1.6 -5.3 endonuclease III compare
Psest_3510 -1.6 -4.8 Na+-dependent transporters of the SNF family compare
Psest_0508 -1.6 -4.6 gamma-glutamyl phosphate reductase compare
Psest_0161 -1.6 -1.1 Membrane-bound metallopeptidase compare
Psest_1163 -1.6 -1.5 diguanylate cyclase (GGDEF) domain compare
Psest_0168 -1.6 -3.6 Uncharacterized conserved protein compare
Psest_2308 -1.6 -0.9 Predicted Fe-S protein compare
Psest_2945 -1.6 -1.4 septum site-determining protein MinC compare
Psest_2682 -1.6 -2.6 fumarate hydratase, class II compare
Psest_3377 -1.6 -0.6 FKBP-type peptidyl-prolyl cis-trans isomerases 2 compare
Psest_1999 -1.5 -1.0 pseudouridine synthase compare
Psest_2766 -1.5 -0.8 hypothetical protein compare
Psest_2490 -1.5 -4.7 succinyl-CoA synthetase, alpha subunit compare
Psest_0872 -1.5 -0.6 Helix-turn-helix. compare
Psest_0969 -1.5 -1.5 transcription elongation factor GreA compare
Psest_3651 -1.5 -4.8 2-phosphoglycolate phosphatase, prokaryotic compare
Psest_3270 -1.5 -1.5 probable S-adenosylmethionine-dependent methyltransferase, YraL family compare
Psest_0195 -1.5 -3.7 Small integral membrane protein compare
Psest_2880 -1.5 -3.1 Glycosyltransferase compare
Psest_3732 -1.5 -4.3 polyphosphate kinase 1 compare
Psest_3129 -1.5 -0.9 tyrosine recombinase XerD compare
Psest_0719 -1.5 -5.0 Uncharacterized protein conserved in bacteria compare
Psest_0790 -1.5 -2.3 Uncharacterized protein conserved in bacteria compare
Psest_0299 -1.5 -2.7 Chemotaxis signal transduction protein compare
Psest_2011 -1.5 -4.4 Predicted permease compare
Psest_0431 -1.5 -5.6 Lactate dehydrogenase and related dehydrogenases compare
Psest_0516 -1.5 -6.1 D-alanyl-D-alanine carboxypeptidase compare
Psest_1773 -1.5 -3.0 methionine-R-sulfoxide reductase compare
Psest_3391 -1.5 -1.1 Uncharacterized protein conserved in bacteria compare
Psest_3173 -1.5 -2.9 Uncharacterized protein conserved in bacteria compare
Psest_4278 -1.5 -2.2 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component compare
Psest_1315 -1.5 -0.9 hypothetical protein compare
Psest_2756 -1.5 -0.6 hypothetical protein compare
Psest_3862 -1.5 -5.8 phosphoenolpyruvate-protein phosphotransferase compare
Psest_2230 -1.5 -3.5 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes compare
Psest_2762 -1.5 -2.2 hypothetical protein compare
Psest_3383 -1.5 -2.6 Uncharacterized protein conserved in bacteria compare
Psest_0146 -1.5 -3.4 Uncharacterized protein involved in outer membrane biogenesis compare
Psest_1518 -1.5 -1.7 tRNA_Ser_CGA compare
Psest_2810 -1.4 -3.1 5'/3'-nucleotidase SurE compare
Psest_3944 -1.4 -0.9 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
Psest_2130 -1.4 -2.0 exodeoxyribonuclease III compare
Psest_4047 -1.4 -6.3 Restriction endonuclease S subunits compare
Psest_3721 -1.4 -4.1 Malic enzyme compare
Psest_2981 -1.4 -1.4 sodium pump decarboxylases, gamma subunit compare
Psest_3720 -1.4 -8.4 penicillin-binding protein, 1A family compare
Psest_4285 -1.4 -4.9 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase compare
Psest_3215 -1.4 -3.0 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
Psest_3111 -1.4 -4.1 hypothetical protein compare
Psest_2896 -1.4 -2.9 hypothetical protein compare
Psest_2278 -1.4 -3.3 coenzyme PQQ biosynthesis protein PqqD compare
Psest_1472 -1.4 -4.2 Protein of unknown function (DUF3108). compare
Psest_4405 -1.4 -1.5 hypothetical protein compare
Psest_2274 -1.4 -3.6 coenzyme PQQ biosynthesis protein A compare
Psest_1945 -1.4 -2.9 hypothetical protein compare
Psest_0542 -1.4 -1.3 AMP nucleosidase compare
Psest_3401 -1.4 -4.2 DNA repair protein RadA compare
Psest_4170 -1.4 -0.8 Flagellar biosynthesis/type III secretory pathway protein compare
Psest_2801 -1.4 -4.0 hypothetical protein compare
Psest_2053 -1.4 -2.9 Uncharacterized low-complexity proteins compare
Psest_1791 -1.4 -2.4 ABC-type transport system, involved in lipoprotein release, permease component compare
Psest_1660 -1.4 -1.3 NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit compare
Psest_0771 -1.4 -5.9 Acyl-CoA hydrolase compare
Psest_4243 -1.4 -0.7 type VI secretion lipoprotein, VC_A0113 family compare
Psest_2238 -1.4 -1.3 hypothetical protein compare
Psest_1271 -1.4 -3.7 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family compare
Psest_0609 -1.4 -1.1 hypothetical protein compare
Psest_1623 -1.4 -2.6 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family compare
Psest_2132 -1.3 -6.2 Outer membrane protein compare
Psest_3090 -1.3 -4.9 DNA repair protein RecO compare
Psest_0004 -1.3 -5.8 recF protein compare
Psest_2122 -1.3 -0.5 Parvulin-like peptidyl-prolyl isomerase compare
Psest_1166 -1.3 -1.6 transcriptional regulator, ArgP family compare
Psest_1132 -1.3 -2.8 mutator mutT protein compare
Psest_2955 -1.3 -3.4 Predicted transcriptional regulator with C-terminal CBS domains compare
Psest_2090 -1.3 -1.9 Protein of unknown function (DUF2970). compare
Psest_2944 -1.3 -2.6 lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase compare
Psest_0073 -1.3 -2.8 ABC-type multidrug transport system, ATPase and permease components compare
Psest_0805 -1.3 -1.5 hypothetical protein compare
Psest_0678 -1.3 -0.8 yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region compare
Psest_0998 -1.3 -1.5 poly(A) polymerase compare
Psest_0744 -1.3 -0.5 Uncharacterized conserved protein compare


Specific Phenotypes

For 26 genes in this experiment

For stress Sodium Chlorate in Pseudomonas stutzeri RCH2

For stress Sodium Chlorate across organisms