Experiment set3H24 for Dechlorosoma suillum PS

Compare to:

Anaerobic growth in rich media with perchlorate electron acceptor, 1000 uM Stressor (H2S) spiked in when cells reach OD 0.5

200 most important genes:

  gene name fitness t score description  
Dsui_0469 -2.8 -1.7 lipopolysaccharide heptosyltransferase III, putative compare
Dsui_2443 -1.8 -1.0 putative metal-binding protein, possibly nucleic-acid binding protein compare
Dsui_1094 -1.2 -1.5 shikimate kinase compare
Dsui_2586 -1.1 -2.1 type IV secretory pathway, VirB9 component compare
Dsui_2590 -1.1 -2.4 Pilin accessory protein (PilO) compare
Dsui_2563 -1.0 -1.9 hypothetical protein compare
Dsui_0425 -1.0 -2.6 putative Fe-S oxidoreductase compare
Dsui_0460 -1.0 -1.5 ADP-heptose:LPS heptosyltransferase compare
Dsui_3081 -1.0 -0.6 chaperone protein DnaK compare
Dsui_0007 -1.0 -0.7 cold shock protein compare
Dsui_1097 -0.9 -1.5 NADH/NADPH-dependent glutamate synthase small subunit compare
Dsui_1398 -0.9 -1.3 ABC-type transport system involved in resistance to organic solvents, ATPase component compare
Dsui_1576 -0.9 -0.5 dihydrolipoamide dehydrogenase compare
Dsui_2607 -0.9 -0.9 hypothetical protein compare
Dsui_2668 -0.9 -2.5 putative phosphatase compare
Dsui_1170 -0.9 -1.0 heme exporter protein CcmD compare
Dsui_1402 -0.9 -0.6 ABC-type transport system involved in resistance to organic solvents, auxiliary component compare
Dsui_2599 -0.9 -1.1 hypothetical protein compare
Dsui_3080 -0.9 -0.3 molecular chaperone GrpE (heat shock protein) compare
Dsui_2694 -0.8 -0.9 ribosomal protein S2 compare
Dsui_1266 -0.8 -1.9 transcriptional regulator NrdR compare
Dsui_1577 -0.8 -0.4 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form compare
Dsui_3495 -0.8 -1.0 FKBP-type peptidyl-prolyl cis-trans isomerase compare
Dsui_0600 -0.8 -1.2 TIGR00251 family protein compare
Dsui_0032 -0.7 -2.1 NAD-dependent protein deacetylase, SIR2 family compare
Dsui_1675 -0.7 -2.1 hypothetical protein compare
Dsui_0255 -0.7 -1.2 hypothetical protein compare
Dsui_1000 -0.7 -2.9 hypothetical protein compare
Dsui_2098 -0.7 -1.0 hypothetical protein compare
Dsui_0395 -0.7 -1.9 outer membrane lipoprotein compare
Dsui_0202 -0.7 -1.0 hypothetical protein compare
Dsui_3220 -0.7 -0.9 PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase compare
Dsui_2141 -0.7 -3.0 flagellar motor protein compare
Dsui_2166 -0.7 -1.9 Fe2+-dicitrate sensor, membrane component compare
Dsui_0338 -0.7 -1.5 translation initiation factor IF-1 compare
Dsui_1992 -0.6 -0.9 ribosomal protein L9 compare
Dsui_1682 -0.6 -1.4 biopolymer transport protein compare
Dsui_1482 -0.6 -1.3 hypothetical protein compare
Dsui_2158 -0.6 -1.6 response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain compare
Dsui_2964 -0.6 -1.5 precorrin-2 C20-methyltransferase compare
Dsui_1058 -0.6 -2.1 hypothetical protein compare
Dsui_2378 -0.6 -1.2 hypothetical protein compare
Dsui_2543 -0.6 -1.0 hypothetical protein compare
Dsui_1403 -0.6 -0.4 putative NTP binding protein (contains STAS domain) compare
Dsui_3508 -0.6 -1.4 exodeoxyribonuclease VII, small subunit compare
Dsui_2559 -0.6 -1.3 Protein of unknown function (DUF2523) compare
Dsui_2902 -0.6 -0.7 hypothetical protein compare
Dsui_0885 -0.6 -1.3 hypothetical protein compare
Dsui_2717 -0.6 -0.5 RNA polymerase-binding protein DksA compare
Dsui_2704 -0.6 -1.9 yecA family protein compare
Dsui_0301 -0.6 -0.9 histidine kinase compare
Dsui_2965 -0.6 -1.0 cobalamin biosynthesis protein CbiG compare
Dsui_0617 -0.6 -1.9 hypothetical protein compare
Dsui_0042 -0.6 -1.5 Protein of unknown function (DUF2892) compare
Dsui_0316 -0.6 -2.0 hypothetical protein compare
Dsui_2030 -0.6 -2.6 branched-chain amino acid aminotransferase, group I compare
Dsui_1932 -0.6 -1.4 transcriptional regulator compare
Dsui_0036 -0.6 -2.7 TonB family protein compare
Dsui_2339 -0.5 -2.5 putative domain HDIG-containing protein compare
Dsui_0946 -0.5 -1.2 putative nitrogen fixation protein FixT compare
Dsui_0923 -0.5 -3.3 putative iron-regulated membrane protein compare
Dsui_2424 -0.5 -1.3 hypothetical protein compare
Dsui_1165 -0.5 -2.1 Ni,Fe-hydrogenase I large subunit compare
Dsui_3531 -0.5 -1.2 Protein of unknown function (DUF3619) compare
Dsui_2095 -0.5 -1.3 methylase involved in ubiquinone/menaquinone biosynthesis compare
Dsui_1879 -0.5 -1.8 luciferase family oxidoreductase, group 1 compare
Dsui_3423 -0.5 -2.2 hydroxypyruvate isomerase compare
Dsui_0945 -0.5 -1.5 Iron-sulfur cluster assembly accessory protein compare
Dsui_2819 -0.5 -1.8 putative hydrolase or acyltransferase of alpha/beta superfamily compare
Dsui_2199 -0.5 -0.6 bacterial nucleoid DNA-binding protein compare
Dsui_0499 -0.5 -0.9 DNA-directed RNA polymerase, omega subunit compare
Dsui_1096 -0.5 -2.0 glutamate synthase family protein compare
Dsui_0576 -0.5 -2.2 electron transfer flavoprotein, beta subunit compare
Dsui_2072 -0.5 -2.0 Pirin-related protein compare
Dsui_3124 -0.5 -1.7 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains compare
Dsui_1515 -0.5 -1.4 poly(A) polymerase compare
Dsui_0176 -0.5 -2.1 ribosome modulation factor compare
Dsui_3484 -0.5 -0.4 putative permease compare
Dsui_0020 -0.5 -2.6 HAD-superfamily subfamily IIA hydrolase, TIGR01458 compare
Dsui_1620 -0.5 -1.4 PAP2 (acid phosphatase) superfamily protein compare
Dsui_3295 -0.5 -1.6 isocitrate dehydrogenase, NADP-dependent, monomeric type compare
Dsui_0992 -0.5 -1.3 putative membrane protein compare
Dsui_0184 -0.5 -0.8 putative transcriptional regulator compare
Dsui_1251 -0.5 -1.1 acylphosphatase compare
Dsui_0175 -0.5 -1.2 hypothetical protein compare
Dsui_2820 -0.5 -2.2 putative hydrolase or acyltransferase of alpha/beta superfamily compare
Dsui_1621 -0.5 -1.1 diacylglycerol kinase compare
Dsui_3133 -0.5 -0.9 hypothetical protein compare
Dsui_1119 -0.5 -1.5 glutathione peroxidase compare
Dsui_1859 -0.5 -1.9 hypothetical protein compare
Dsui_2961 -0.5 -1.9 precorrin isomerase compare
Dsui_2252 -0.5 -2.5 transcriptional regulator with HTH domain and aminotransferase domain compare
Dsui_0523 -0.5 -1.4 putative membrane protein compare
Dsui_2869 -0.5 -1.5 transcriptional regulator compare
Dsui_2183 -0.5 -1.5 aldose 1-epimerase-like enzyme compare
Dsui_3357 -0.5 -2.0 hypothetical protein compare
Dsui_2867 -0.5 -1.5 surface antigen family protein compare
Dsui_2187 -0.4 -1.3 acyl-CoA synthetase/AMP-acid ligase compare
Dsui_0742 -0.4 -3.1 phosphoenolpyruvate-protein phosphotransferase compare
Dsui_2924 -0.4 -1.0 hypothetical protein compare
Dsui_2296 -0.4 -1.7 chemotaxis protein compare
Dsui_0308 -0.4 -2.4 Major Facilitator Superfamily transporter compare
Dsui_0267 -0.4 -0.7 multidrug resistance efflux pump compare
Dsui_2966 -0.4 -1.4 cobalamin biosynthesis protein CbiG compare
Dsui_2720 -0.4 -1.5 tRNA pseudouridine 55 synthase compare
Dsui_2593 -0.4 -1.4 PilS N terminal protein compare
Dsui_2393 -0.4 -1.7 uncharacterized domain HDIG-containing protein compare
Dsui_1830 -0.4 -1.1 Yip1 domain protein compare
Dsui_2881 -0.4 -2.5 8-amino-7-oxononanoate synthase compare
Dsui_3429 -0.4 -2.2 RND family efflux transporter, MFP subunit compare
Dsui_1970 -0.4 -0.7 metalloendopeptidase-like membrane protein compare
Dsui_2676 -0.4 -1.2 putative membrane protein compare
Dsui_1676 -0.4 -1.9 biopolymer transport protein compare
Dsui_1113 -0.4 -1.2 ABC-type branched-chain amino acid transport systems, ATPase component compare
Dsui_1003 -0.4 -2.5 phosphoribosylglycinamide formyltransferase 2 compare
Dsui_0956 -0.4 -1.6 nitrogenase molybdenum-iron protein alpha chain compare
Dsui_1540 -0.4 -2.4 NAD(FAD)-dependent dehydrogenase compare
Dsui_2172 -0.4 -0.7 transcriptional regulator compare
Dsui_1670 -0.4 -1.8 cytochrome c peroxidase compare
Dsui_2641 -0.4 -1.7 putative multicopper oxidase compare
Dsui_1275 -0.4 -0.8 protein-export chaperone SecB compare
Dsui_0985 -0.4 -1.5 putative Fe-S protein compare
Dsui_1649 -0.4 -1.2 universal stress protein UspA-like protein compare
Dsui_1897 -0.4 -0.8 hypothetical protein compare
Dsui_2295 -0.4 -0.5 transcriptional regulator compare
Dsui_2933 -0.4 -1.7 heavy metal efflux pump, cobalt-zinc-cadmium compare
Dsui_1997 -0.4 -1.8 Peroxiredoxin compare
Dsui_3001 -0.4 -1.1 putative domain HDIG-containing protein compare
Dsui_1229 -0.4 -1.3 Zn-dependent oxidoreductase, NADPH:quinone reductase compare
Dsui_0963 -0.4 -1.6 collagenase-like protease compare
Dsui_1664 -0.4 -2.0 putative periplasmic protein compare
Dsui_0927 -0.4 -1.4 cytochrome c551/c552 compare
Dsui_0412 -0.4 -1.2 ABC-type dipeptide/oligopeptide/nickel transport system, permease component compare
Dsui_2912 -0.4 -1.5 putative xylanase/chitin deacetylase compare
Dsui_2188 -0.4 -1.3 Protein of unknown function (DUF3460) compare
Dsui_3014 -0.4 -1.0 outer membrane protein/peptidoglycan-associated (lipo)protein compare
Dsui_3329 -0.4 -1.8 hypothetical protein compare
Dsui_1541 -0.4 -2.2 cytochrome c553 compare
Dsui_1445 -0.4 -0.5 succinyl-CoA synthetase, beta subunit compare
Dsui_3247 -0.4 -0.7 Protein of unknown function (DUF2788) compare
Dsui_0734 -0.4 -1.1 acetyltransferase compare
Dsui_2276 -0.4 -1.2 Protein of unknown function (DUF2975) compare
Dsui_2485 -0.4 -1.9 response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain compare
Dsui_1978 -0.4 -0.2 putative lipoprotein compare
Dsui_2967 -0.4 -1.8 precorrin-3B C17-methyltransferase compare
Dsui_2330 -0.4 -1.8 3-hydroxyacyl-CoA dehydrogenase compare
Dsui_2259 -0.4 -1.2 hypothetical protein compare
Dsui_1440 -0.4 -1.4 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_0292 -0.4 -1.7 putative signal transduction protein containing EAL and modified HD-GYP domains compare
Dsui_3308 -0.4 -1.7 cytochrome c553 compare
Dsui_1352 -0.4 -1.3 acyl dehydratase compare
Dsui_1395 -0.4 -1.9 MSHA-type pilus biogenesis protein MshL compare
Dsui_2137 -0.4 -1.1 queuosine biosynthesis protein QueD compare
Dsui_2949 -0.4 -1.3 Fe2+-dicitrate sensor, membrane component compare
Dsui_3478 -0.4 -1.4 hypothetical protein compare
Dsui_0835 -0.4 -1.7 conserved hypothetical protein YidD compare
Dsui_1858 -0.4 -1.6 transcriptional regulator compare
Dsui_1046 -0.4 -1.6 hypothetical protein compare
Dsui_0195 -0.4 -1.9 Caudovirus prohead protease compare
Dsui_1600 -0.4 -1.2 putative enzyme of heme biosynthesis compare
Dsui_3504 -0.4 -1.3 rhodanese-related sulfurtransferase compare
Dsui_0248 -0.4 -1.4 Protein of unknown function (DUF3025) compare
Dsui_0125 -0.4 -0.8 NAD-dependent aldehyde dehydrogenase compare
Dsui_0457 -0.4 -0.5 Protein of unknown function (DUF2782) compare
Dsui_1120 -0.4 -1.9 uncharacterized protein SCO1/SenC/PrrC compare
Dsui_0406 -0.4 -0.7 Rhodanese-related sulfurtransferase compare
Dsui_3120 -0.3 -1.6 cAMP-binding protein compare
Dsui_0700 -0.3 -1.1 psiF repeat protein compare
Dsui_0026 -0.3 -2.4 CBS domain-containing protein compare
Dsui_1400 -0.3 -0.7 ABC-type transport system involved in resistance to organic solvents, periplasmic component compare
Dsui_2150 -0.3 -1.0 hypothetical protein compare
Dsui_1443 -0.3 -1.7 phenylacetate-CoA ligase compare
Dsui_1708 -0.3 -2.0 chemotaxis protein histidine kinase-like protein compare
Dsui_3251 -0.3 -1.4 ATPase involved in chromosome partitioning compare
Dsui_0588 -0.3 -1.9 putative GTPase, G3E family compare
Dsui_2972 -0.3 -1.6 leucyl/phenylalanyl-tRNA--protein transferase compare
Dsui_0266 -0.3 -2.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_2748 -0.3 -1.5 hypothetical protein compare
Dsui_0930 -0.3 -2.3 transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains compare
Dsui_1004 -0.3 -0.6 conserved protein of DIM6/NTAB family compare
Dsui_1658 -0.3 -1.4 uncharacterized protein probably involved in high-affinity Fe2+ transport compare
Dsui_0797 -0.3 -1.5 protein of unknown function (DUF1840) compare
Dsui_2079 -0.3 -1.4 histidine kinase compare
Dsui_3380 -0.3 -1.6 ribulose-5-phosphate 4-epimerase-like epimerase or aldolase compare
Dsui_2189 -0.3 -0.7 acyl-CoA synthetase (NDP forming) compare
Dsui_0214 -0.3 -1.2 TIGR02594 family protein compare
Dsui_2702 -0.3 -1.2 cell division protein compare
Dsui_1221 -0.3 -1.2 hypothetical protein compare
Dsui_1185 -0.3 -2.5 hypothetical protein involved in intracellular sulfur reduction compare
Dsui_0994 -0.3 -1.8 peptidase S16, lon domain protein compare
Dsui_2081 -0.3 -1.9 transcriptional regulator with HTH domain and aminotransferase domain compare
Dsui_3533 -0.3 -1.6 putative membrane protein/domain protein compare
Dsui_2747 -0.3 -1.8 uncharacterized integral membrane protein compare
Dsui_0181 -0.3 -0.6 hypothetical protein compare
Dsui_1588 -0.3 -1.9 aminoglycoside phosphotransferase compare
Dsui_2905 -0.3 -1.3 flagellin/flagellar hook associated protein compare
Dsui_1863 -0.3 -1.3 response regulator containing a CheY-like receiver domain and an HD-GYP domain compare
Dsui_2058 -0.3 -1.1 ABC-type branched-chain amino acid transport systems, ATPase component compare
Dsui_2533 -0.3 -0.9 TRAP-type C4-dicarboxylate transport system, small permease component compare
Dsui_1968 -0.3 -1.7 5''/3''-nucleotidase SurE compare


Specific Phenotypes

None in this experiment

For Dechlorosoma suillum PS in anaerobic experiments

For anaerobic Sodium perchlorate monohydrate across organisms