Experiment set3H16 for Dechlorosoma suillum PS

Compare to:

Anaerobic growth in rich media with perchlorate electron acceptor

200 most important genes:

  gene name fitness t score description  
Dsui_0990 -4.2 -1.4 putative P-loop-containing kinase compare
Dsui_0935 -2.2 -1.3 cytochrome c5 compare
Dsui_2694 -1.9 -1.4 ribosomal protein S2 compare
Dsui_2443 -1.9 -0.8 putative metal-binding protein, possibly nucleic-acid binding protein compare
Dsui_0007 -1.7 -0.9 cold shock protein compare
Dsui_0267 -1.5 -2.0 multidrug resistance efflux pump compare
Dsui_2295 -1.4 -1.1 transcriptional regulator compare
Dsui_0500 -1.4 -2.3 (p)ppGpp synthetase, RelA/SpoT family compare
Dsui_2189 -1.3 -2.1 acyl-CoA synthetase (NDP forming) compare
Dsui_0859 -1.3 -1.6 hypothetical protein compare
Dsui_2127 -1.2 -1.1 flavodoxin reductase family protein compare
Dsui_3133 -1.1 -1.7 hypothetical protein compare
Dsui_2259 -1.1 -1.8 hypothetical protein compare
Dsui_0871 -1.1 -1.8 hypothetical protein compare
Dsui_2326 -1.1 -0.7 hypothetical protein compare
Dsui_3484 -1.0 -0.8 putative permease compare
Dsui_0460 -0.9 -1.1 ADP-heptose:LPS heptosyltransferase compare
Dsui_1576 -0.9 -0.5 dihydrolipoamide dehydrogenase compare
Dsui_1891 -0.9 -3.3 enolase superfamily enzyme related to L-alanine-DL-glutamate epimerase compare
Dsui_0738 -0.9 -1.7 secondary thiamine-phosphate synthase enzyme compare
Dsui_1537 -0.9 -2.8 DNA repair protein radc compare
Dsui_2530 -0.9 -4.0 pseudouridine synthase, RluA family compare
Dsui_2640 -0.8 -1.8 Cytochrome c compare
Dsui_1970 -0.8 -1.1 metalloendopeptidase-like membrane protein compare
Dsui_1615 -0.8 -3.1 hypothetical protein compare
Dsui_2560 -0.8 -1.1 zonula occludens toxin compare
Dsui_1577 -0.7 -0.4 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form compare
Dsui_2599 -0.7 -0.7 hypothetical protein compare
Dsui_0255 -0.7 -1.0 hypothetical protein compare
Dsui_2610 -0.7 -1.0 single-stranded DNA-binding protein compare
Dsui_2143 -0.7 -1.3 hypothetical protein compare
Dsui_2466 -0.7 -0.8 ATP dependent DNA ligase-like protein compare
Dsui_0316 -0.7 -2.8 hypothetical protein compare
Dsui_2554 -0.7 -1.5 hypothetical protein compare
Dsui_1581 -0.7 -0.8 response regulator compare
Dsui_2166 -0.6 -2.0 Fe2+-dicitrate sensor, membrane component compare
Dsui_0457 -0.6 -1.2 Protein of unknown function (DUF2782) compare
Dsui_1674 -0.6 -2.5 EAL domain-containing protein compare
Dsui_0621 -0.6 -1.6 RNA polymerase sigma factor, sigma-70 family compare
Dsui_2717 -0.6 -0.6 RNA polymerase-binding protein DksA compare
Dsui_0945 -0.6 -1.7 Iron-sulfur cluster assembly accessory protein compare
Dsui_1852 -0.6 -2.6 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_1445 -0.6 -0.8 succinyl-CoA synthetase, beta subunit compare
Dsui_2891 -0.6 -1.3 hemerythrin-like metal-binding domain-containing protein compare
Dsui_0399 -0.6 -1.3 symmetrical bis(5'-nucleosyl)-tetraphosphatase compare
Dsui_0268 -0.6 -1.2 ABC-type multidrug transport system, ATPase component compare
Dsui_2781 -0.6 -1.7 PAS domain S-box compare
Dsui_1096 -0.6 -2.3 glutamate synthase family protein compare
Dsui_0631 -0.6 -2.0 cytochrome c551/c552 compare
Dsui_3096 -0.6 -3.2 NADH dehydrogenase, FAD-containing subunit compare
Dsui_1149 -0.6 -2.8 Zn-dependent protease with chaperone function compare
Dsui_1887 -0.6 -2.7 PAS domain S-box compare
Dsui_0270 -0.6 -1.8 transcriptional regulator compare
Dsui_0458 -0.5 -1.6 TIGR00730 family protein compare
Dsui_1440 -0.5 -1.8 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_2664 -0.5 -1.6 hypothetical protein compare
Dsui_0747 -0.5 -1.6 glutamate--cysteine ligase compare
Dsui_0573 -0.5 -1.3 ferredoxin-like protein compare
Dsui_2501 -0.5 -1.1 TniQ protein compare
Dsui_2720 -0.5 -1.8 tRNA pseudouridine 55 synthase compare
Dsui_2145 -0.5 -0.8 FtsH-interacting integral membrane protein compare
Dsui_1109 -0.5 -1.6 ABC-type branched-chain amino acid transport systems, ATPase component compare
Dsui_2277 -0.5 -1.7 Rhs element Vgr protein compare
Dsui_0544 -0.5 -1.6 flagellar basal body-associated protein compare
Dsui_2895 -0.5 -1.8 ABC-type uncharacterized transport system, periplasmic component compare
Dsui_2393 -0.5 -2.0 uncharacterized domain HDIG-containing protein compare
Dsui_1969 -0.5 -2.0 protein-L-isoaspartate and D-aspartate O-methyltransferase compare
Dsui_3338 -0.5 -2.3 Zn-finger containing NTP pyrophosphohydrolase compare
Dsui_1358 -0.5 -2.3 metalloendopeptidase-like membrane protein compare
Dsui_3220 -0.5 -0.8 PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase compare
Dsui_0973 -0.5 -2.1 putative transcriptional regulator compare
Dsui_2330 -0.5 -2.2 3-hydroxyacyl-CoA dehydrogenase compare
Dsui_3508 -0.5 -1.1 exodeoxyribonuclease VII, small subunit compare
Dsui_0020 -0.5 -2.0 HAD-superfamily subfamily IIA hydrolase, TIGR01458 compare
Dsui_3099 -0.5 -2.7 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase compare
Dsui_0743 -0.5 -1.4 phosphotransferase system HPr (HPr) family protein compare
Dsui_1900 -0.5 -1.9 hypothetical protein compare
Dsui_3456 -0.5 -1.2 hypothetical protein compare
Dsui_2355 -0.5 -0.8 cytochrome B561 compare
Dsui_1888 -0.5 -2.4 putative domain HDIG-containing protein compare
Dsui_1857 -0.5 -1.7 putative permease, DMT superfamily compare
Dsui_2199 -0.5 -0.5 bacterial nucleoid DNA-binding protein compare
Dsui_2591 -0.5 -1.1 type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB compare
Dsui_2265 -0.5 -1.7 DNA-directed DNA polymerase III PolC compare
Dsui_0259 -0.5 -1.6 sulfate ABC transporter, permease protein CysW compare
Dsui_1848 -0.5 -1.7 arsenical-resistance protein compare
Dsui_1730 -0.5 -0.9 flagellar biosynthesis anti-sigma factor FlgM compare
Dsui_0118 -0.5 -2.0 monothiol glutaredoxin, Grx4 family compare
Dsui_1312 -0.5 -1.6 NTP pyrophosphohydrolase compare
Dsui_1844 -0.5 -1.5 phosphate transport regulator related to PhoU compare
Dsui_2220 -0.5 -1.0 hypothetical protein compare
Dsui_2882 -0.5 -1.7 putative hydrolase or acyltransferase of alpha/beta superfamily compare
Dsui_2398 -0.4 -1.5 hypothetical protein compare
Dsui_2298 -0.4 -0.9 putative thioesterase compare
Dsui_1159 -0.4 -2.3 hydrogenase expression/formation protein HypD compare
Dsui_2946 -0.4 -1.5 DNA/RNA helicase, superfamily II compare
Dsui_0800 -0.4 -1.7 hypothetical protein (DUF2059) compare
Dsui_2933 -0.4 -2.1 heavy metal efflux pump, cobalt-zinc-cadmium compare
Dsui_3273 -0.4 -1.7 carbonic anhydrase compare
Dsui_3374 -0.4 -2.4 cyclic nucleotide-binding protein compare
Dsui_0469 -0.4 -0.5 lipopolysaccharide heptosyltransferase III, putative compare
Dsui_2275 -0.4 -1.1 putative transcriptional regulator compare
Dsui_3229 -0.4 -1.3 transglutaminase-like enzyme, predicted cysteine protease compare
Dsui_1175 -0.4 -1.3 cytochrome c-type biogenesis protein CcmI compare
Dsui_2762 -0.4 -0.9 Protein of unknown function (DUF3617) compare
Dsui_1433 -0.4 -1.0 chemotaxis protein compare
Dsui_2676 -0.4 -1.5 putative membrane protein compare
Dsui_2138 -0.4 -1.3 putative esterase compare
Dsui_2396 -0.4 -2.4 putative domain HDIG-containing protein compare
Dsui_3495 -0.4 -0.6 FKBP-type peptidyl-prolyl cis-trans isomerase compare
Dsui_3414 -0.4 -2.6 FAD/FMN-dependent dehydrogenase compare
Dsui_2240 -0.4 -2.0 PAS domain S-box compare
Dsui_3290 -0.4 -1.2 4-hydroxybenzoate synthetase (chorismate lyase) compare
Dsui_3410 -0.4 -2.0 serine/threonine protein phosphatase compare
Dsui_0311 -0.4 -2.4 ATP-dependent DNA helicase RecG compare
Dsui_3106 -0.4 -1.3 hypothetical protein compare
Dsui_0971 -0.4 -1.8 poly(R)-hydroxyalkanoic acid synthase, class I compare
Dsui_1843 -0.4 -1.6 hypothetical protein compare
Dsui_3271 -0.4 -2.0 ATP-dependent protease Clp, ATPase subunit compare
Dsui_0477 -0.4 -0.4 tol-pal system protein YbgF compare
Dsui_0742 -0.4 -2.8 phosphoenolpyruvate-protein phosphotransferase compare
Dsui_0920 -0.4 -0.5 fructose-2,6-bisphosphatase compare
Dsui_0998 -0.4 -1.5 A/G-specific adenine glycosylase compare
Dsui_0005 -0.4 -2.6 putative secreted protein compare
Dsui_3448 -0.4 -1.6 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_1164 -0.4 -1.9 hydrogenase nickel insertion protein HypA compare
Dsui_2080 -0.4 -1.1 response regulator compare
Dsui_0425 -0.4 -0.7 putative Fe-S oxidoreductase compare
Dsui_2650 -0.4 -2.8 TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component compare
Dsui_0215 -0.4 -0.9 hypothetical protein compare
Dsui_3376 -0.4 -1.8 aspartate/tyrosine/aromatic aminotransferase compare
Dsui_0737 -0.4 -1.0 hypothetical protein compare
Dsui_3375 -0.4 -0.6 hypothetical protein compare
Dsui_2097 -0.4 -1.9 putative phosphohydrolase compare
Dsui_2383 -0.4 -1.5 hypothetical protein compare
Dsui_0282 -0.4 -1.6 hypothetical protein compare
Dsui_0209 -0.4 -1.4 hypothetical protein compare
Dsui_0893 -0.4 -1.1 rare lipoprotein A compare
Dsui_0391 -0.4 -1.0 Protein of unknown function (DUF3426) compare
Dsui_2459 -0.4 -0.5 hypothetical protein compare
Dsui_2867 -0.4 -0.9 surface antigen family protein compare
Dsui_2853 -0.4 -1.6 PPIC-type PPIASE family protein compare
Dsui_0598 -0.4 -1.5 hypothetical protein compare
Dsui_1446 -0.4 -0.4 succinyl-CoA synthetase, alpha subunit compare
Dsui_1664 -0.4 -1.0 putative periplasmic protein compare
Dsui_0465 -0.4 -0.6 ADP-heptose:LPS heptosyltransferase compare
Dsui_2687 -0.4 -1.5 RIP metalloprotease RseP compare
Dsui_1999 -0.4 -1.4 putative translation initiation inhibitor, yjgF family compare
Dsui_1679 -0.4 -1.8 Mg chelatase, cobalamin biosynthesis protein CobN compare
Dsui_0199 -0.4 -0.5 Bacteriophage protein of unknown function (DUF646) compare
Dsui_2766 -0.4 -1.6 putative homoserine kinase type II (protein kinase fold) compare
Dsui_2697 -0.4 -2.0 peptide deformylase compare
Dsui_1443 -0.4 -1.6 phenylacetate-CoA ligase compare
Dsui_3206 -0.4 -1.1 putative metal-binding protein compare
Dsui_1515 -0.4 -1.0 poly(A) polymerase compare
Dsui_2966 -0.4 -0.7 cobalamin biosynthesis protein CbiG compare
Dsui_2698 -0.4 -1.0 purine nucleoside phosphorylase compare
Dsui_3102 -0.4 -1.1 molybdopterin-guanine dinucleotide biosynthesis protein A, proteobacterial compare
Dsui_2705 -0.4 -1.0 permease compare
Dsui_3031 -0.4 -1.9 enoyl-(acyl-carrier-protein) reductase (NADH) compare
Dsui_2161 -0.4 -2.0 ATP-dependent chaperone ClpB compare
Dsui_0571 -0.4 -1.1 ferredoxin compare
Dsui_3411 -0.4 -1.6 hypothetical protein compare
Dsui_2164 -0.4 -0.9 signal transduction histidine kinase compare
Dsui_0963 -0.4 -1.8 collagenase-like protease compare
Dsui_0179 -0.3 -0.7 hypothetical protein compare
Dsui_3162 -0.3 -2.2 TonB-dependent siderophore receptor compare
Dsui_2234 -0.3 -1.2 hypothetical protein compare
Dsui_1884 -0.3 -1.1 histidine kinase compare
Dsui_0432 -0.3 -1.6 hypothetical protein compare
Dsui_1703 -0.3 -2.0 ADP-ribose pyrophosphatase compare
Dsui_3018 -0.3 -2.3 OAH/OAS sulfhydrylase compare
Dsui_0248 -0.3 -1.3 Protein of unknown function (DUF3025) compare
Dsui_1304 -0.3 -0.5 cytochrome c553 compare
Dsui_2586 -0.3 -0.7 type IV secretory pathway, VirB9 component compare
Dsui_1976 -0.3 -2.3 deacetylase, histone deacetylase/acetoin utilization protein compare
Dsui_2955 -0.3 -1.5 cobalamin biosynthesis protein CbiM compare
Dsui_1098 -0.3 -1.1 hypothetical protein compare
Dsui_0744 -0.3 -1.2 phosphotransferase system, mannose/fructose-specific component IIA compare
Dsui_2176 -0.3 -1.1 putative esterase of the alpha-beta hydrolase superfamily compare
Dsui_0745 -0.3 -0.9 membrane-associated lipoprotein involved in thiamine biosynthesis compare
Dsui_0558 -0.3 -1.4 tetratricopeptide repeat protein compare
Dsui_2631 -0.3 -0.7 hypothetical protein compare
Dsui_2243 -0.3 -0.7 hypothetical protein compare
Dsui_3181 -0.3 -0.3 RND family efflux transporter, MFP subunit compare
Dsui_2651 -0.3 -0.5 ankyrin repeat-containing protein compare
Dsui_3536 -0.3 -0.7 leucyl aminopeptidase compare
Dsui_2526 -0.3 -1.3 site-specific recombinase, DNA invertase Pin compare
Dsui_0258 -0.3 -0.7 sulfate ABC transporter, ATP-binding protein compare
Dsui_1643 -0.3 -1.3 uncharacterized protein involved in response to NO compare
Dsui_3518 -0.3 -1.6 putative membrane protein compare
Dsui_1973 -0.3 -2.2 transglutaminase-like enzyme, predicted cysteine protease compare
Dsui_1454 -0.3 -0.9 Rhodanese-like protein,cyclic nucleotide-binding protein compare
Dsui_1227 -0.3 -0.9 DNA/RNA helicase, superfamily I compare
Dsui_1922 -0.3 -1.6 outer membrane receptor for ferrienterochelin and colicins compare
Dsui_0476 -0.3 -1.1 organic radical activating enzyme compare
Dsui_2254 -0.3 -1.5 glycine/serine hydroxymethyltransferase compare
Dsui_1273 -0.3 -0.6 Rhodanese-related sulfurtransferase compare
Dsui_1027 -0.3 -1.0 RNA methyltransferase, RsmD family compare
Dsui_2156 -0.3 -2.1 methyl-accepting chemotaxis protein compare


Specific Phenotypes

None in this experiment

For Dechlorosoma suillum PS in anaerobic experiments