Experiment set3H13 for Pseudomonas stutzeri RCH2

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Sodium nitrite nitrogen source

Genes with specific phenotypes:

  gene name fitness t score description  
Psest_1926 -3.4 -6.2 Uncharacterized anaerobic dehydrogenase conserved
Psest_1936 -2.5 -7.0 Response regulator with putative antiterminator output domain conserved
Psest_1925 -2.4 -7.7 uroporphyrin-III C-methyltransferase compare
Psest_1928 -2.4 -8.2 Nitrite reductase (NAD(P)H) (EC 1.7.1.4) (from data) conserved
Psest_3835 -2.0 -6.1 Rubredoxin compare
Psest_0634 -1.5 -5.1 hypothetical protein compare
Psest_2669 -1.3 -5.1 Acyl-CoA dehydrogenases compare
Psest_3993 -1.2 -6.5 alpha-L-glutamate ligases, RimK family compare
Psest_0539 +1.0 6.5 Acyl-CoA dehydrogenases compare
Psest_0233 +1.0 6.7 hypothetical protein compare
Psest_1935 +1.0 5.7 hypothetical protein compare
Psest_4092 +1.1 5.4 Ectoine synthase. compare
Psest_3975 +1.1 7.1 Signal transduction histidine kinase compare
Psest_3734 +1.1 5.6 Uncharacterized protein involved in an early stage of isoprenoid biosynthesis compare
Psest_3976 +1.1 8.3 PAS domain S-box compare
Psest_2261 +1.2 6.2 hypothetical protein compare
Psest_3241 +1.2 7.6 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) compare
Psest_0994 +1.3 5.9 L-aspartate-alpha-decarboxylase compare
Psest_0270 +1.3 8.3 carbamate kinase compare
Psest_0351 +1.3 5.2 hypothetical protein compare
Psest_3727 +1.3 5.1 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases compare
Psest_3974 +1.4 5.6 Anti-sigma regulatory factor (Ser/Thr protein kinase) compare
Psest_2551 +1.4 8.8 1-aminocyclopropane-1-carboxylate deaminase compare
Psest_0546 +1.5 5.3 hypothetical protein compare
Psest_1123 +1.5 12.0 adhesin-associated sorting protein (DUF1329) (from data) compare
Psest_2441 +1.6 6.3 hypothetical protein compare
Psest_0006 +1.8 7.0 alkyl hydroperoxide reductase, F subunit compare
Psest_0190 +1.9 7.1 Uncharacterized conserved protein compare
Psest_3235 +1.9 15.3 Protein of unknown function (DUF1329). compare
Psest_0446 +2.1 10.1 hypothetical protein compare


Specific phenotypes for nitrogen source Sodium nitrite across organisms