Experiment set39S454 for Burkholderia phytofirmans PsJN

Compare to:

36hr Phyto Lib only

200 most important genes:

  gene name fitness t score description  
BPHYT_RS32290 -4.8 -2.7 hypothetical protein compare
BPHYT_RS01485 -4.3 -1.4 histidine kinase compare
BPHYT_RS29745 -4.2 -2.3 phosphonopyruvate decarboxylase compare
BPHYT_RS23315 -3.9 -1.3 hypothetical protein compare
BPHYT_RS11155 -3.7 -1.2 hypothetical protein compare
BPHYT_RS15890 -3.7 -1.2 3-hydroxy-2-methylbutyryl-CoA dehydrogenase compare
BPHYT_RS09545 -3.6 -2.0 peptide methionine sulfoxide reductase compare
BPHYT_RS10650 -3.5 -1.1 membrane protein compare
BPHYT_RS10240 -3.4 -1.1 translation initiation inhibitor compare
BPHYT_RS11795 -3.2 -1.0 membrane protein compare
BPHYT_RS26185 -3.2 -1.0 thioesterase compare
BPHYT_RS10135 -3.0 -1.0 hypothetical protein compare
BPHYT_RS21330 -3.0 -1.4 hypothetical protein compare
BPHYT_RS36385 -2.9 -0.9 TetR family transcriptional regulator compare
BPHYT_RS07595 -2.9 -1.3 membrane protein compare
BPHYT_RS32860 -2.9 -0.9 hypothetical protein compare
BPHYT_RS12510 -2.9 -1.5 RNA-binding protein compare
BPHYT_RS34490 -2.9 -0.9 hypothetical protein compare
BPHYT_RS11075 -2.9 -2.6 membrane protein compare
BPHYT_RS00690 -2.8 -0.9 transcriptional regulator compare
BPHYT_RS25370 -2.7 -1.2 acyl-CoA dehydrogenase compare
BPHYT_RS26510 -2.7 -1.4 transcriptional regulator compare
BPHYT_RS10750 -2.7 -0.8 LysR family transcriptional regulator compare
BPHYT_RS07090 -2.6 -1.5 hypothetical protein compare
BPHYT_RS22885 -2.6 -2.6 hypothetical protein compare
BPHYT_RS25870 -2.6 -0.8 type III secretion system ATPase compare
BPHYT_RS31050 -2.6 -0.8 epimerase compare
BPHYT_RS12925 -2.5 -0.8 exodeoxyribonuclease III compare
BPHYT_RS03730 -2.5 -2.2 transcriptional repressor NrdR compare
BPHYT_RS30450 -2.5 -0.8 ABC transporter permease compare
BPHYT_RS07660 -2.5 -1.6 sulfonate ABC transporter substrate-binding protein compare
BPHYT_RS23650 -2.4 -0.8 hypothetical protein compare
BPHYT_RS23600 -2.4 -2.0 hypothetical protein compare
BPHYT_RS20235 -2.4 -4.6 iron ABC transporter compare
BPHYT_RS01625 -2.4 -1.6 chemotaxis protein CheY compare
BPHYT_RS16065 -2.4 -0.8 LacI family transcriptional regulator compare
BPHYT_RS03655 -2.2 -1.0 membrane protein compare
BPHYT_RS14060 -2.1 -1.2 peptidase M23 compare
BPHYT_RS33765 -2.1 -0.7 membrane protein compare
BPHYT_RS23100 -2.1 -1.6 sugar ABC transporter substrate-binding protein compare
BPHYT_RS02765 -2.1 -1.2 cytochrome BD oxidase subunit I compare
BPHYT_RS25335 -2.1 -0.7 hypothetical protein compare
BPHYT_RS08235 -2.0 -0.6 nucleoprotein, Hfg, host factor I compare
BPHYT_RS17765 -2.0 -2.8 toluene ABC transporter ATP-binding protein compare
BPHYT_RS30010 -2.0 -0.9 cell division protein compare
BPHYT_RS26305 -2.0 -1.8 exonuclease compare
BPHYT_RS23275 -1.9 -1.9 3-methylcrotonyl-CoA carboxylase subunit alpha compare
BPHYT_RS20000 -1.9 -1.7 serine/threonine protein kinase compare
BPHYT_RS26025 -1.9 -0.6 hypothetical protein compare
BPHYT_RS22910 -1.8 -0.6 hypothetical protein compare
BPHYT_RS34305 -1.8 -2.1 succinate-semialdehyde dehydrogenase compare
BPHYT_RS16180 -1.8 -0.6 TetR family transcriptional regulator compare
BPHYT_RS27060 -1.8 -1.3 photosystem reaction center subunit H compare
BPHYT_RS25470 -1.8 -0.8 alkylhydroperoxidase compare
BPHYT_RS28485 -1.7 -0.5 GntR family transcriptional regulator compare
BPHYT_RS21860 -1.7 -1.0 hypothetical protein compare
BPHYT_RS29870 -1.7 -1.0 2-dehydropantoate 2-reductase compare
BPHYT_RS16555 -1.7 -2.1 cation transporter compare
BPHYT_RS11970 -1.7 -0.9 cupin compare
BPHYT_RS12615 -1.7 -0.5 dihydrodipicolinate synthase compare
BPHYT_RS17745 -1.7 -4.7 toluene tolerance family protein compare
BPHYT_RS02300 -1.7 -0.9 acid shock protein compare
BPHYT_RS30485 -1.7 -0.9 ABC transporter ATP-binding protein compare
BPHYT_RS03410 -1.7 -1.3 queuine tRNA-ribosyltransferase compare
BPHYT_RS18760 -1.6 -1.5 flagellar biosynthesis protein FliT compare
BPHYT_RS36360 -1.6 -1.7 hypothetical protein compare
BPHYT_RS08385 -1.6 -0.9 secretion protein compare
BPHYT_RS21940 -1.6 -2.0 hemolysin D compare
BPHYT_RS19545 -1.6 -1.9 nuclear protein SET compare
BPHYT_RS09000 -1.6 -0.7 competence protein ComE compare
BPHYT_RS04500 -1.6 -1.8 urease accessory protein UreF compare
BPHYT_RS04860 -1.6 -2.5 ABC transporter ATP-binding protein compare
BPHYT_RS06120 -1.6 -3.0 heat-shock protein compare
BPHYT_RS19610 -1.6 -1.0 general secretion pathway protein GspC compare
BPHYT_RS09465 -1.6 -1.1 transcriptional regulator compare
BPHYT_RS13390 -1.5 -0.7 IclR family transcriptional regulator compare
BPHYT_RS35835 -1.5 -1.6 hypothetical protein compare
BPHYT_RS25780 -1.5 -0.5 DeoR faimly transcriptional regulator compare
BPHYT_RS14665 -1.5 -1.6 hypothetical protein compare
BPHYT_RS17760 -1.5 -6.1 ABC transporter permease compare
BPHYT_RS00855 -1.5 -1.3 hypothetical protein compare
BPHYT_RS31345 -1.5 -1.4 malonate transporter compare
BPHYT_RS09755 -1.5 -1.0 glycosyl transferase family 1 compare
BPHYT_RS02860 -1.5 -0.5 membrane protein compare
BPHYT_RS19785 -1.5 -1.2 chemotaxis protein CheY compare
BPHYT_RS01975 -1.5 -0.9 hypothetical protein compare
BPHYT_RS12820 -1.5 -3.5 D-alanyl-D-alanine carboxypeptidase compare
BPHYT_RS23570 -1.5 -1.8 chemotaxis protein CheY compare
BPHYT_RS25980 -1.5 -0.7 urea carboxylase compare
BPHYT_RS22930 -1.5 -0.6 type II secretion system protein compare
BPHYT_RS20060 -1.5 -0.8 hypothetical protein compare
BPHYT_RS28680 -1.4 -1.6 porin compare
BPHYT_RS22525 -1.4 -1.9 dioxygenase compare
BPHYT_RS20185 -1.4 -1.1 sugar transferase compare
BPHYT_RS10670 -1.4 -1.1 catechol 1,2-dioxygenase compare
BPHYT_RS17240 -1.4 -0.4 cell division protein FtsW compare
BPHYT_RS08340 -1.4 -1.3 chemotaxis protein CheY compare
BPHYT_RS19260 -1.4 -1.0 hypothetical protein compare
BPHYT_RS30745 -1.4 -1.4 hypothetical protein compare
BPHYT_RS26415 -1.4 -1.3 glutathione S-transferase compare
BPHYT_RS16250 -1.4 -0.8 N5-carboxyaminoimidazole ribonucleotide mutase compare
BPHYT_RS03945 -1.4 -1.6 hypothetical protein compare
BPHYT_RS26115 -1.4 -1.6 polysaccharide deacetylase compare
BPHYT_RS26660 -1.3 -1.8 precorrin-4 C11-methyltransferase compare
BPHYT_RS05775 -1.3 -1.7 hypothetical protein compare
BPHYT_RS30055 -1.3 -0.9 hypothetical protein compare
BPHYT_RS26900 -1.3 -1.8 isoprenylcysteine carboxyl methyltransferase compare
BPHYT_RS07325 -1.3 -0.4 GntR family transcriptional regulator compare
BPHYT_RS18610 -1.3 -3.0 lytic transglycosylase compare
BPHYT_RS01955 -1.3 -3.2 hypothetical protein compare
BPHYT_RS34235 -1.3 -1.3 putative accessory domain for L-fuconate/L-rhamnonate dehydratase (EC 4.2.1.68; EC 4.2.1.90) (from data) compare
BPHYT_RS06610 -1.3 -0.7 triosephosphate isomerase compare
BPHYT_RS29015 -1.3 -1.0 RND transporter compare
BPHYT_RS21485 -1.3 -0.7 hypothetical protein compare
BPHYT_RS08665 -1.3 -0.6 hypothetical protein compare
BPHYT_RS08150 -1.3 -0.6 membrane protein compare
BPHYT_RS21495 -1.3 -0.8 ABC transporter compare
BPHYT_RS35120 -1.3 -1.5 hypothetical protein compare
BPHYT_RS30800 -1.3 -0.8 MFS transporter compare
BPHYT_RS18910 -1.3 -1.0 FlgN compare
BPHYT_RS17625 -1.3 -8.8 cytochrome B compare
BPHYT_RS25005 -1.3 -1.4 FMN reductase compare
BPHYT_RS17620 -1.3 -7.0 cytochrome C compare
BPHYT_RS31680 -1.3 -2.6 dehydrogenase compare
BPHYT_RS18660 -1.3 -1.2 hypothetical protein compare
BPHYT_RS03170 -1.3 -0.7 membrane protein compare
BPHYT_RS13450 -1.3 -0.9 GntR family transcriptional regulator compare
BPHYT_RS07480 -1.3 -0.7 FAD-dependent oxidoreductase compare
BPHYT_RS05650 -1.3 -1.0 hypothetical protein compare
BPHYT_RS15165 -1.3 -2.5 histidine ammonia-lyase compare
BPHYT_RS18835 -1.3 -0.9 flagellar biosynthesis protein FliR compare
BPHYT_RS24285 -1.3 -1.1 TetR family transcriptional regulator compare
BPHYT_RS36035 -1.3 -0.9 hypothetical protein compare
BPHYT_RS31260 -1.3 -0.8 histidine kinase compare
BPHYT_RS20425 -1.2 -1.3 hypothetical protein compare
BPHYT_RS30140 -1.2 -0.6 3-methylitaconate isomerase compare
BPHYT_RS23920 -1.2 -1.5 malonate decarboxylase subunit beta compare
BPHYT_RS33370 -1.2 -1.0 LysR family transcriptional regulator compare
BPHYT_RS08765 -1.2 -0.7 ABC transporter ATP-binding protein compare
BPHYT_RS26990 -1.2 -1.6 GntR family transcriptional regulator compare
BPHYT_RS09655 -1.2 -3.2 mechanosensitive ion channel protein MscS compare
BPHYT_RS02570 -1.2 -3.5 phosphocarrier protein HPr compare
BPHYT_RS36275 -1.2 -0.7 hypothetical protein compare
BPHYT_RS04215 -1.2 -1.6 hypothetical protein compare
BPHYT_RS28515 -1.2 -2.3 mannonate dehydratase compare
BPHYT_RS34900 -1.2 -1.4 hypothetical protein compare
BPHYT_RS16215 -1.2 -2.3 sensor histidine kinase compare
BPHYT_RS17520 -1.2 -2.6 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase compare
BPHYT_RS17430 -1.2 -3.9 thiol:disulfide interchange protein compare
BPHYT_RS02575 -1.2 -6.2 phosphoenolpyruvate-protein phosphotransferase compare
BPHYT_RS29920 -1.2 -0.5 hypothetical protein compare
BPHYT_RS14180 -1.2 -1.0 membrane protein compare
BPHYT_RS09565 -1.2 -1.0 acetyl-CoA acetyltransferase compare
BPHYT_RS02135 -1.2 -1.2 glyoxylate reductase compare
BPHYT_RS24755 -1.2 -1.6 catalase compare
BPHYT_RS29695 -1.2 -0.8 hypothetical protein compare
BPHYT_RS29540 -1.2 -0.6 aldolase compare
BPHYT_RS08360 -1.2 -1.0 LysR family transcriptional regulator compare
BPHYT_RS32210 -1.2 -0.7 hypothetical protein compare
BPHYT_RS35205 -1.2 -0.8 hypothetical protein compare
BPHYT_RS03955 -1.1 -1.6 glycosyl transferase compare
BPHYT_RS14840 -1.1 -3.6 lytic transglycosylase compare
BPHYT_RS08020 -1.1 -1.2 hypothetical protein compare
BPHYT_RS36130 -1.1 -0.8 hypothetical protein compare
BPHYT_RS21350 -1.1 -0.7 ADP-glucose pyrophosphorylase compare
BPHYT_RS18705 -1.1 -0.8 5,10-methylenetetrahydrofolate reductase compare
BPHYT_RS08405 -1.1 -0.9 hypothetical protein compare
BPHYT_RS26670 -1.1 -1.5 Cobalt-precorrin-5B C(1)-methyltransferase compare
BPHYT_RS20905 -1.1 -1.3 hypothetical protein compare
BPHYT_RS02415 -1.1 -2.1 cytochrome C550 compare
BPHYT_RS22265 -1.1 -0.7 hypothetical protein compare
BPHYT_RS28720 -1.1 -1.3 shikimate dehydrogenase compare
BPHYT_RS20085 -1.1 -1.1 mannosyltransferase compare
BPHYT_RS11890 -1.1 -1.5 hypothetical protein compare
BPHYT_RS27850 -1.1 -0.7 hemerythrin compare
BPHYT_RS26525 -1.1 -0.6 amino acid ABC transporter substrate-binding protein compare
BPHYT_RS22260 -1.1 -0.9 hypothetical protein compare
BPHYT_RS10040 -1.1 -0.7 hypothetical protein compare
BPHYT_RS21070 -1.1 -1.5 ferredoxin compare
BPHYT_RS31745 -1.1 -2.5 ABC transporter ATP-binding protein compare
BPHYT_RS24655 -1.1 -0.9 amino acid ABC transporter substrate-binding protein compare
BPHYT_RS01660 -1.1 -2.0 hypothetical protein compare
BPHYT_RS04340 -1.1 -1.0 hypothetical protein compare
BPHYT_RS04955 -1.1 -1.4 methionyl-tRNA synthetase compare
BPHYT_RS26080 -1.1 -0.5 ABC transporter ATPase compare
BPHYT_RS08165 -1.1 -0.9 pilus assembly protein TadE compare
BPHYT_RS11110 -1.1 -2.6 chemotaxis protein CheY compare
BPHYT_RS19905 -1.1 -0.9 membrane protein compare
BPHYT_RS36525 -1.1 -0.9 hypothetical protein compare
BPHYT_RS23675 -1.1 -0.8 lysine transporter LysE compare
BPHYT_RS34800 -1.1 -2.3 thioesterase compare
BPHYT_RS03240 -1.1 -1.6 formate dehydrogenase accessory protein FdhD compare
BPHYT_RS10475 -1.1 -0.9 mammalian cell entry protein compare
BPHYT_RS33045 -1.1 -0.7 response regulator receiver protein compare
BPHYT_RS10765 -1.1 -1.3 amidase compare
BPHYT_RS08135 -1.0 -0.9 hypothetical protein compare
BPHYT_RS32225 -1.0 -1.2 hypothetical protein compare
BPHYT_RS24315 -1.0 -0.7 phosphoribosyltransferase compare
BPHYT_RS29300 -1.0 -1.0 endoribonuclease L-PSP compare
BPHYT_RS09860 -1.0 -0.5 pilus assembly protein PilP compare


Specific Phenotypes

None in this experiment

For Burkholderia phytofirmans PsJN in nophagecontrol experiments