Experiment set39S453 for Burkholderia phytofirmans PsJN

Compare to:

36hr PHYTO11 MOI 0.1

200 most important genes:

  gene name fitness t score description  
BPHYT_RS01485 -4.3 -1.3 histidine kinase compare
BPHYT_RS09895 -4.2 -1.3 LysR family transcriptional regulator compare
BPHYT_RS28905 -4.1 -1.2 alpha-dehydro-beta-deoxy-D-glucarate aldolase compare
BPHYT_RS34085 -3.9 -2.0 polyamine ABC transporter permease compare
BPHYT_RS08000 -3.5 -1.9 antibiotic biosynthesis monooxygenase compare
BPHYT_RS25845 -3.4 -1.0 RND transporter MFP subunit compare
BPHYT_RS25980 -3.3 -1.0 urea carboxylase compare
BPHYT_RS08020 -3.3 -2.4 hypothetical protein compare
BPHYT_RS08410 -3.2 -1.0 dehydrogenase compare
BPHYT_RS10215 -3.2 -0.9 sulfate transporter compare
BPHYT_RS08150 -3.1 -0.9 membrane protein compare
BPHYT_RS08665 -3.1 -0.9 hypothetical protein compare
BPHYT_RS12510 -3.0 -1.5 RNA-binding protein compare
BPHYT_RS11825 -3.0 -0.9 cytosine deaminase compare
BPHYT_RS29920 -2.9 -0.9 hypothetical protein compare
BPHYT_RS26510 -2.9 -1.5 transcriptional regulator compare
BPHYT_RS26080 -2.9 -0.9 ABC transporter ATPase compare
BPHYT_RS29520 -2.9 -0.9 hypothetical protein compare
BPHYT_RS33155 -2.9 -1.7 hypothetical protein compare
BPHYT_RS33690 -2.9 -1.7 molybdate ABC transporter permease compare
BPHYT_RS36385 -2.9 -0.9 TetR family transcriptional regulator compare
BPHYT_RS04365 -2.9 -9.7 membrane protein compare
BPHYT_RS32395 -2.8 -0.8 hypothetical protein compare
BPHYT_RS09860 -2.8 -0.8 pilus assembly protein PilP compare
BPHYT_RS04350 -2.8 -9.8 membrane protein compare
BPHYT_RS27495 -2.7 -0.8 hypothetical protein compare
BPHYT_RS12925 -2.6 -0.8 exodeoxyribonuclease III compare
BPHYT_RS27430 -2.6 -1.1 LysR family transcriptional regulator compare
BPHYT_RS05650 -2.6 -1.3 hypothetical protein compare
BPHYT_RS18660 -2.5 -1.7 hypothetical protein compare
BPHYT_RS16065 -2.5 -0.7 LacI family transcriptional regulator compare
BPHYT_RS27175 -2.5 -1.1 DNA-binding protein compare
BPHYT_RS07220 -2.4 -2.0 GCN5 family acetyltransferase compare
BPHYT_RS24315 -2.4 -1.2 phosphoribosyltransferase compare
BPHYT_RS23990 -2.4 -1.0 N-hydroxyarylamine O-acetyltransferase compare
BPHYT_RS02765 -2.2 -1.2 cytochrome BD oxidase subunit I compare
BPHYT_RS27410 -2.2 -1.3 amidohydrolase compare
BPHYT_RS07595 -2.2 -1.3 membrane protein compare
BPHYT_RS30010 -2.2 -0.9 cell division protein compare
BPHYT_RS08165 -2.2 -1.3 pilus assembly protein TadE compare
BPHYT_RS08235 -2.2 -0.6 nucleoprotein, Hfg, host factor I compare
BPHYT_RS10005 -2.1 -0.8 hypothetical protein compare
BPHYT_RS30610 -2.0 -1.8 major facilitator transporter compare
BPHYT_RS22910 -2.0 -0.6 hypothetical protein compare
BPHYT_RS21460 -1.9 -1.2 UDP-N-acetylglucosamine 2-epimerase compare
BPHYT_RS11150 -1.9 -1.4 LysR family transcriptional regulator compare
BPHYT_RS17265 -1.9 -1.0 cell division protein compare
BPHYT_RS09655 -1.9 -4.0 mechanosensitive ion channel protein MscS compare
BPHYT_RS25605 -1.9 -2.6 symporter compare
BPHYT_RS02300 -1.8 -0.9 acid shock protein compare
BPHYT_RS18610 -1.8 -3.4 lytic transglycosylase compare
BPHYT_RS28485 -1.8 -0.5 GntR family transcriptional regulator compare
BPHYT_RS25805 -1.8 -2.7 deoxyribose kinase (EC 2.7.1.15) (from data) compare
BPHYT_RS07660 -1.8 -1.4 sulfonate ABC transporter substrate-binding protein compare
BPHYT_RS09930 -1.8 -1.2 LysR family transcriptional regulator compare
BPHYT_RS34810 -1.8 -1.7 RND transporter compare
BPHYT_RS19545 -1.7 -2.0 nuclear protein SET compare
BPHYT_RS28575 -1.7 -0.7 transcriptional regulator compare
BPHYT_RS04595 -1.7 -1.2 cytoplasmic protein compare
BPHYT_RS28790 -1.7 -1.2 membrane protein compare
BPHYT_RS25780 -1.7 -0.5 DeoR faimly transcriptional regulator compare
BPHYT_RS02285 -1.7 -4.0 cell division protein compare
BPHYT_RS21530 -1.7 -1.3 RNA polymerase subunit sigma-24 compare
BPHYT_RS28675 -1.7 -2.9 hypothetical protein compare
BPHYT_RS31255 -1.7 -0.9 cytochrome B561 compare
BPHYT_RS35885 -1.7 -1.7 hypothetical protein compare
BPHYT_RS14865 -1.6 -1.1 UDP-glucose 6-dehydrogenase compare
BPHYT_RS14505 -1.6 -1.2 membrane protein compare
BPHYT_RS35955 -1.6 -1.0 hypothetical protein compare
BPHYT_RS05290 -1.6 -0.7 hypothetical protein compare
BPHYT_RS05420 -1.6 -2.1 glutathione S-transferase compare
BPHYT_RS00770 -1.6 -1.1 conjugal transfer protein TraC compare
BPHYT_RS29450 -1.6 -0.9 phosphonate metabolism protein compare
BPHYT_RS22815 -1.5 -1.2 TonB-denpendent receptor compare
BPHYT_RS15015 -1.5 -0.6 ArsR family transcriptional regulator compare
BPHYT_RS10720 -1.5 -1.1 hypothetical protein compare
BPHYT_RS21625 -1.5 -0.6 LysR family transcriptional regulator compare
BPHYT_RS14550 -1.5 -0.6 tRNA-Asn compare
BPHYT_RS07480 -1.5 -0.8 FAD-dependent oxidoreductase compare
BPHYT_RS16555 -1.5 -1.8 cation transporter compare
BPHYT_RS35400 -1.4 -1.8 ABC transporter compare
BPHYT_RS29655 -1.4 -1.2 polysaccharide deacetylase compare
BPHYT_RS07835 -1.4 -1.1 muconolactone delta-isomerase compare
BPHYT_RS14245 -1.4 -0.6 membrane protein compare
BPHYT_RS07325 -1.4 -0.4 GntR family transcriptional regulator compare
BPHYT_RS33170 -1.4 -1.7 acetyltransferase compare
BPHYT_RS14060 -1.4 -1.0 peptidase M23 compare
BPHYT_RS35250 -1.4 -1.4 alcohol dehydrogenase compare
BPHYT_RS29870 -1.4 -0.8 2-dehydropantoate 2-reductase compare
BPHYT_RS21350 -1.4 -1.2 ADP-glucose pyrophosphorylase compare
BPHYT_RS32360 -1.4 -0.8 spermidine/putrescine ABC transporter ATPase compare
BPHYT_RS28305 -1.4 -0.7 protein tyrosine phosphatase compare
BPHYT_RS09100 -1.4 -5.6 stationary phase survival protein SurE compare
BPHYT_RS23880 -1.4 -1.0 sugar ABC transporter permease compare
BPHYT_RS29235 -1.4 -1.4 cell shape determination protein CcmA compare
BPHYT_RS12500 -1.4 -1.9 hypothetical protein compare
BPHYT_RS32210 -1.4 -0.8 hypothetical protein compare
BPHYT_RS11310 -1.4 -1.0 LysR family transcriptional regulator compare
BPHYT_RS25770 -1.4 -0.6 hypothetical protein compare
BPHYT_RS00815 -1.4 -0.7 hypothetical protein compare
BPHYT_RS03945 -1.4 -1.6 hypothetical protein compare
BPHYT_RS24670 -1.4 -1.3 ABC transporter permease compare
BPHYT_RS27155 -1.4 -0.8 peroxiredoxin compare
BPHYT_RS27230 -1.3 -0.7 hypothetical protein compare
BPHYT_RS12265 -1.3 -0.5 alanine acetyltransferase compare
BPHYT_RS16025 -1.3 -2.5 Kynurenine formamidase, bacterial (EC 3.5.1.9) (from data) compare
BPHYT_RS13245 -1.3 -2.7 hypothetical protein compare
BPHYT_RS21170 -1.3 -1.1 LysR family transcriptional regulator compare
BPHYT_RS29840 -1.3 -0.8 polysaccharide biosynthesis protein compare
BPHYT_RS34675 -1.3 -2.1 DNA-binding protein compare
BPHYT_RS20095 -1.3 -0.7 transcriptional regulator compare
BPHYT_RS21415 -1.3 -2.0 3-oxoadipate CoA-transferase subunit A compare
BPHYT_RS25370 -1.3 -0.8 acyl-CoA dehydrogenase compare
BPHYT_RS31700 -1.3 -2.0 porin compare
BPHYT_RS22940 -1.3 -0.9 pilus assembly protein TadE compare
BPHYT_RS05920 -1.3 -2.1 rod shape-determining protein RodA compare
BPHYT_RS11840 -1.3 -1.6 LysR family transcriptional regulator compare
BPHYT_RS17520 -1.3 -2.8 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase compare
BPHYT_RS01625 -1.3 -1.5 chemotaxis protein CheY compare
BPHYT_RS09155 -1.2 -2.4 3-ketoacyl-ACP reductase compare
BPHYT_RS04340 -1.2 -1.2 hypothetical protein compare
BPHYT_RS26305 -1.2 -1.1 exonuclease compare
BPHYT_RS19335 -1.2 -0.8 hypothetical protein compare
BPHYT_RS05005 -1.2 -1.5 hypothetical protein compare
BPHYT_RS02365 -1.2 -0.9 hypothetical protein compare
BPHYT_RS28370 -1.2 -0.9 peroxidase compare
BPHYT_RS11530 -1.2 -1.5 5-hydroxyisourate hydrolase compare
BPHYT_RS22135 -1.2 -0.9 3-ketoacyl-ACP reductase compare
BPHYT_RS35310 -1.2 -1.0 GCN5 family N-acetyltransferase compare
BPHYT_RS33805 -1.2 -0.6 hypothetical protein compare
BPHYT_RS20590 -1.2 -1.3 methionine sulfoxide reductase A compare
BPHYT_RS24285 -1.2 -1.1 TetR family transcriptional regulator compare
BPHYT_RS15285 -1.2 -1.3 transcription elongation factor GreB compare
BPHYT_RS05515 -1.2 -1.5 hypothetical protein compare
BPHYT_RS17830 -1.2 -2.4 histidine kinase compare
BPHYT_RS16195 -1.2 -2.3 carbon monoxide dehydrogenase subunit G compare
BPHYT_RS08905 -1.2 -1.2 peroxiredoxin compare
BPHYT_RS27435 -1.2 -3.6 amylo-alpha-1,6-glucosidase compare
BPHYT_RS04865 -1.2 -1.7 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase compare
BPHYT_RS29820 -1.2 -1.5 hypothetical protein compare
BPHYT_RS23075 -1.2 -1.6 GntR family transcriptional regulator compare
BPHYT_RS17805 -1.2 -1.6 hypothetical protein compare
BPHYT_RS06975 -1.2 -0.7 glutamate racemase compare
BPHYT_RS21595 -1.2 -1.9 TetR family transcriptional regulator compare
BPHYT_RS25140 -1.2 -0.9 hypothetical protein compare
BPHYT_RS36130 -1.2 -0.8 hypothetical protein compare
BPHYT_RS22455 -1.2 -0.5 phosphonate ABC transporter substrate-binding protein compare
BPHYT_RS35235 -1.2 -1.2 amino acid transporter compare
BPHYT_RS09545 -1.2 -0.9 peptide methionine sulfoxide reductase compare
BPHYT_RS03655 -1.1 -0.5 membrane protein compare
BPHYT_RS15190 -1.1 -0.8 acyl carrier protein compare
BPHYT_RS00740 -1.1 -2.2 hypothetical protein compare
BPHYT_RS20150 -1.1 -1.5 glycosyl transferase family 1 compare
BPHYT_RS17050 -1.1 -1.7 hypothetical protein compare
BPHYT_RS36360 -1.1 -1.4 hypothetical protein compare
BPHYT_RS17765 -1.1 -3.6 toluene ABC transporter ATP-binding protein compare
BPHYT_RS09495 -1.1 -1.4 ABC transporter ATP-binding protein compare
BPHYT_RS18630 -1.1 -1.3 allophanate hydrolase compare
BPHYT_RS26820 -1.1 -0.9 LysR family transcriptional regulator compare
BPHYT_RS34745 -1.1 -0.6 hypothetical protein compare
BPHYT_RS21030 -1.1 -1.6 ABC transporter ATP-binding protein compare
BPHYT_RS31805 -1.1 -3.0 beta-lactamase compare
BPHYT_RS26965 -1.1 -0.9 L-lactate dehydrogenase, LldG subunit (from data) compare
BPHYT_RS27125 -1.1 -0.7 hypothetical protein compare
BPHYT_RS36525 -1.1 -0.8 hypothetical protein compare
BPHYT_RS02815 -1.1 -1.4 methyltransferase compare
BPHYT_RS07855 -1.1 -2.2 benzoate 1,2-dioxygenase subunit alpha compare
BPHYT_RS17920 -1.1 -0.8 protein CyaY compare
BPHYT_RS26385 -1.1 -0.8 glutamine amidotransferase compare
BPHYT_RS21805 -1.1 -1.4 transcriptional regulator compare
BPHYT_RS22260 -1.1 -0.8 hypothetical protein compare
BPHYT_RS30450 -1.1 -0.4 ABC transporter permease compare
BPHYT_RS24245 -1.1 -2.8 MerR family transcriptional regulator compare
BPHYT_RS30870 -1.1 -1.5 chromate transporter compare
BPHYT_RS04335 -1.1 -0.5 membrane protein compare
BPHYT_RS15915 -1.1 -4.5 ornithine carbamoyltransferase compare
BPHYT_RS34030 -1.1 -2.1 pilus assembly protein CpaB compare
BPHYT_RS24410 -1.1 -1.9 type VI secretion protein compare
BPHYT_RS31495 -1.1 -1.5 transposase compare
BPHYT_RS26585 -1.1 -2.4 trehalase compare
BPHYT_RS26375 -1.1 -1.1 ATPase AAA compare
BPHYT_RS02040 -1.1 -1.7 hypothetical protein compare
BPHYT_RS27405 -1.1 -1.7 aldehyde dehydrogenase compare
BPHYT_RS05440 -1.0 -1.6 hypothetical protein compare
BPHYT_RS28705 -1.0 -0.8 IclR family transcriptional regulator compare
BPHYT_RS03280 -1.0 -0.6 mannose-1-phosphate guanylyltransferase compare
BPHYT_RS06255 -1.0 -1.5 spore coat protein U compare
BPHYT_RS05405 -1.0 -1.5 GCN5 family acetyltransferase compare
BPHYT_RS33425 -1.0 -1.8 transcriptional regulator compare
BPHYT_RS02570 -1.0 -2.8 phosphocarrier protein HPr compare
BPHYT_RS34155 -1.0 -0.9 3-hydroxybutyryl-CoA dehydrogenase compare
BPHYT_RS29100 -1.0 -0.6 ketosteroid isomerase compare
BPHYT_RS16055 -1.0 -2.0 sugar ABC transporter permease compare
BPHYT_RS03645 -1.0 -1.2 tRNA dimethylallyltransferase compare
BPHYT_RS27570 -1.0 -1.3 universal stress protein UspA compare
BPHYT_RS17745 -1.0 -3.9 toluene tolerance family protein compare
BPHYT_RS03900 -1.0 -0.8 phospholipid-binding protein compare
BPHYT_RS07850 -1.0 -1.5 catechol 1,2-dioxygenase compare
BPHYT_RS09070 -1.0 -1.9 recombination protein RecR compare
BPHYT_RS13390 -1.0 -0.5 IclR family transcriptional regulator compare


Specific Phenotypes

None in this experiment

For Burkholderia phytofirmans PsJN in phage experiments