Experiment set39S451 for Burkholderia phytofirmans PsJN

200 most detrimental genes:

gene	name	fitness	t score	description
BPHYT_RS11705		+3.6	2.9	hypothetical protein
BPHYT_RS14140		+3.1	7.9	phosphate transporter permease subunit PstC
BPHYT_RS19570		+3.0	25.9	sodium/hydrogen exchanger
BPHYT_RS19565		+2.9	19.9	gamma-glutamyl:cysteine ligase
BPHYT_RS20665		+2.8	2.5	LysR family transcriptional regulator
BPHYT_RS33820		+2.7	25.0	histidine kinase
BPHYT_RS06530		+2.6	2.8	membrane protein
BPHYT_RS14400		+2.6	7.8	anti-sigma factor
BPHYT_RS04945		+2.5	22.9	membrane protein
BPHYT_RS04950		+2.5	21.8	hypothetical protein
BPHYT_RS12985		+2.2	2.6	amino acid acetyltransferase
BPHYT_RS17240		+2.2	1.4	cell division protein FtsW
BPHYT_RS02595		+2.2	4.5	sulfurtransferase
BPHYT_RS18655		+2.2	7.5	3-oxoacyl-ACP synthase
BPHYT_RS02905		+2.2	18.7	RNA polymerase subunit sigma-54
BPHYT_RS27370		+2.1	3.9	CoA transferase
BPHYT_RS05560		+2.0	8.8	Fis family transcriptional regulator
BPHYT_RS05575		+2.0	15.9	Fis family transcriptional regulator
BPHYT_RS25935		+2.0	1.4	type III secretion protein
BPHYT_RS04940		+2.0	2.9	hypothetical protein
BPHYT_RS04285		+1.9	1.2	rhamnosyltransferase
BPHYT_RS05590		+1.9	16.6	trehalose-6-phosphate synthase
BPHYT_RS26975		+1.9	1.9	L-lactate dehydrogenase, LldE subunit (from data)
BPHYT_RS12845		+1.9	15.5	ATPase
BPHYT_RS33920		+1.8	12.3	type II citrate synthase
BPHYT_RS07255		+1.8	4.2	4-oxalocrotonate decarboxylase
BPHYT_RS06075		+1.8	12.8	hypothetical protein
BPHYT_RS13645		+1.8	15.6	threonine--tRNA ligase
BPHYT_RS09330		+1.8	15.7	phytoene synthase
BPHYT_RS27890		+1.8	1.0	hypothetical protein
BPHYT_RS12840		+1.7	3.8	pyruvate dehydrogenase
BPHYT_RS25770		+1.7	1.4	hypothetical protein
BPHYT_RS14135		+1.7	3.3	phosphate transporter permease subunit PtsA
BPHYT_RS09500		+1.7	5.8	glucose-6-phosphate isomerase
BPHYT_RS14855		+1.7	0.8	ADP-L-glycero-D-manno-heptose-6-epimerase
BPHYT_RS14395		+1.7	5.8	sugar dehydratase
BPHYT_RS17095		+1.7	6.1	proline--tRNA ligase
BPHYT_RS07570		+1.7	2.0	hypothetical protein
BPHYT_RS06985		+1.7	10.9	fumarate hydratase
BPHYT_RS23910		+1.6	7.4	phosphoribosyl-dephospho-CoA transferase
BPHYT_RS06975		+1.6	1.9	glutamate racemase
BPHYT_RS05155		+1.6	6.2	acetyltransferase GCN5
BPHYT_RS04370		+1.6	0.5	glycosyl transferase
BPHYT_RS05615		+1.6	1.4	hypothetical protein
BPHYT_RS09660		+1.6	9.2	trehalose-6-phosphate synthase
BPHYT_RS12590		+1.6	2.3	dual-specificity RNA methyltransferase RlmN
BPHYT_RS09815		+1.6	2.0	malate synthase
BPHYT_RS31615		+1.5	1.8	thiamine pyrophosphate protein
BPHYT_RS08850		+1.5	0.8	transcriptional regulator
BPHYT_RS08565		+1.5	0.9	dihydroorotate dehydrogenase
BPHYT_RS12725		+1.5	12.2	regulator
BPHYT_RS26390		+1.5	1.5	antibiotic resistance protein
BPHYT_RS04430		+1.5	2.3	amino acid ABC transporter ATPase
BPHYT_RS06175		+1.5	4.6	LPS biosynthesis
BPHYT_RS15320		+1.4	3.5	hypothetical protein
BPHYT_RS34920		+1.4	1.2	IclR family transcriptional regulator
BPHYT_RS04290		+1.4	0.9	glycosyl transferase family 2
BPHYT_RS05610		+1.4	8.2	DNA-cytosine methyltransferase
BPHYT_RS12150		+1.4	9.6	PII uridylyl-transferase
BPHYT_RS11815		+1.4	2.2	alcohol dehydrogenase
BPHYT_RS26025		+1.4	0.9	hypothetical protein
BPHYT_RS05025		+1.4	1.4	sugar ABC transporter substrate-binding protein
BPHYT_RS34185		+1.4	4.3	cold-shock protein
BPHYT_RS14145		+1.4	6.6	phosphate ABC transporter substrate-binding protein
BPHYT_RS10850		+1.4	1.8	LysR family transcriptional regulator
BPHYT_RS14485		+1.3	3.4	ribonuclease E
BPHYT_RS34320		+1.3	1.9	DNA-binding protein
BPHYT_RS18600		+1.3	2.4	glutathione S-transferase
BPHYT_RS16335		+1.3	3.5	membrane protein
BPHYT_RS04990		+1.3	3.1	hypothetical protein
BPHYT_RS16840		+1.3	2.7	transketolase
BPHYT_RS23880		+1.2	2.0	sugar ABC transporter permease
BPHYT_RS03620		+1.2	6.5	poly(A) polymerase
BPHYT_RS20115		+1.2	1.6	transcriptional regulator
BPHYT_RS17490		+1.2	1.1	haloacid dehalogenase
BPHYT_RS35550		+1.2	1.8	nitrile hydratase
BPHYT_RS09160		+1.2	5.6	polyhydroxyalkanoate synthesis repressor PhaR
BPHYT_RS18255		+1.2	2.5	phenylacetate-CoA oxygenase subunit PaaB
BPHYT_RS23615		+1.2	2.0	XRE family transcriptional regulator
BPHYT_RS20440		+1.2	1.2	IclR family transcriptional regulator
BPHYT_RS21475		+1.2	1.0	hypothetical protein
BPHYT_RS05585		+1.2	4.8	hypothetical protein
BPHYT_RS36275		+1.2	1.1	hypothetical protein
BPHYT_RS28670		+1.2	1.4	MFS transporter
BPHYT_RS07840		+1.1	1.2	muconate cycloisomerase
BPHYT_RS20715		+1.1	1.7	peptidase
BPHYT_RS10040		+1.1	1.4	hypothetical protein
BPHYT_RS26490		+1.1	0.9	hypothetical protein
BPHYT_RS34495		+1.1	2.7	phenol degradation protein meta
BPHYT_RS20970		+1.1	1.4	hypothetical protein
BPHYT_RS16020		+1.1	1.6	AsnC family transcriptional regulator
BPHYT_RS25470		+1.1	1.0	alkylhydroperoxidase
BPHYT_RS08130		+1.1	1.4	transposase
BPHYT_RS30365		+1.1	1.5	beta-lactamase
BPHYT_RS23890		+1.1	2.1	MFS transporter
BPHYT_RS26770		+1.1	1.9	histidine kinase
BPHYT_RS01630		+1.1	1.0	ATP-dependent protease ATPase subunit HslU
BPHYT_RS34485		+1.1	1.8	diguanylate phosphodiesterase
BPHYT_RS09645		+1.1	2.1	ankyrin
BPHYT_RS30100		+1.1	1.9	copper oxidase
BPHYT_RS00335		+1.1	3.2	peptidase M19
BPHYT_RS33150		+1.1	1.2	beta-lactamase
BPHYT_RS09850		+1.1	1.9	molybdopterin oxidoreductase
BPHYT_RS03455		+1.1	2.3	paraquat-inducible protein A
BPHYT_RS32495		+1.1	2.3	ABC transporter
BPHYT_RS11040		+1.1	1.9	GntR family transcriptional regulator
BPHYT_RS08995		+1.1	1.0	hypothetical protein
BPHYT_RS31245		+1.1	1.3	peptide ABC transporter ATP-binding protein
BPHYT_RS32725		+1.1	2.0	cobalt transporter
BPHYT_RS02525		+1.0	5.2	membrane protein
BPHYT_RS10885		+1.0	2.4	glycosyl transferase
BPHYT_RS02640		+1.0	7.7	cytochrome C oxidase
BPHYT_RS28505		+1.0	0.9	5-deoxyglucuronate isomerase
BPHYT_RS02865		+1.0	0.6	hypothetical protein
BPHYT_RS08945		+1.0	6.4	hypothetical protein
BPHYT_RS12825		+1.0	1.6	phasin family protein
BPHYT_RS28985		+1.0	2.4	hypothetical protein
BPHYT_RS16060		+1.0	2.8	ribonucleotide-diphosphate reductase subunit alpha
BPHYT_RS35530		+1.0	1.2	arsenate reductase
BPHYT_RS27175		+1.0	1.1	DNA-binding protein
BPHYT_RS30830		+1.0	2.6	MFS transporter
BPHYT_RS03280		+1.0	1.1	mannose-1-phosphate guanylyltransferase
BPHYT_RS20130		+1.0	2.4	diguanylate phosphodiesterase
BPHYT_RS14340		+1.0	6.3	Fis family transcriptional regulator
BPHYT_RS25955		+1.0	1.1	transcriptional regulator
BPHYT_RS17945		+1.0	2.4	cytochrome C biogenesis protein
BPHYT_RS07140		+1.0	0.9	hypothetical protein
BPHYT_RS16390		+0.9	3.1	MarR family transcriptional regulator
BPHYT_RS11080		+0.9	1.6	hypothetical protein
BPHYT_RS25210		+0.9	1.1	drug:proton antiporter
BPHYT_RS29475		+0.9	1.9	carbon-phosphorus lyase complex subunit PhnJ
BPHYT_RS10165		+0.9	0.9	transcriptional regulator
BPHYT_RS01965		+0.9	1.3	tRNA-Ala
BPHYT_RS16570		+0.9	1.2	glutathione S-transferase
BPHYT_RS26930		+0.9	4.5	mechanosensitive ion channel protein
BPHYT_RS08685		+0.9	2.9	hypothetical protein
BPHYT_RS33850		+0.9	0.6	sporulation protein
BPHYT_RS34770		+0.9	1.6	chemotaxis protein
BPHYT_RS09640		+0.9	3.5	DNAase
BPHYT_RS30635		+0.9	3.2	D-aminopeptidase
BPHYT_RS24965		+0.9	1.4	hypothetical protein
BPHYT_RS17860		+0.9	1.8	transposase
BPHYT_RS26780		+0.9	4.8	chemotaxis protein CheR
BPHYT_RS00295		+0.9	2.4	hypothetical protein
BPHYT_RS25490		+0.9	2.2	hypothetical protein
BPHYT_RS35215		+0.9	1.2	dehydrogenase
BPHYT_RS33060		+0.9	0.8	hypothetical protein
BPHYT_RS33170		+0.9	1.2	acetyltransferase
BPHYT_RS31460		+0.9	1.3	hypothetical protein
BPHYT_RS01455		+0.9	0.9	peptide deformylase
BPHYT_RS35310		+0.9	1.0	GCN5 family N-acetyltransferase
BPHYT_RS12900		+0.9	0.7	transposase
BPHYT_RS27290		+0.9	3.0	pyridine nucleotide-disulfide oxidoreductase
BPHYT_RS12815		+0.9	4.9	IclR family transcriptional regulator
BPHYT_RS34995		+0.9	2.2	MFS transporter
BPHYT_RS13915		+0.9	2.8	3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase
BPHYT_RS09395		+0.9	3.3	ABC transporter permease
BPHYT_RS01620		+0.9	4.2	sensor histidine kinase
BPHYT_RS25095		+0.9	1.1	AraC family transcriptional regulator
BPHYT_RS12635		+0.9	2.4	translation factor Sua5
BPHYT_RS32815		+0.9	1.9	sugar ABC transporter
BPHYT_RS25830		+0.9	1.6	sugar ABC transporter substrate-binding protein
BPHYT_RS32675		+0.9	1.6	2-methylcitrate dehydratase
BPHYT_RS34680		+0.9	4.2	hypothetical protein
BPHYT_RS17035		+0.9	0.8	sugar kinase
BPHYT_RS14130		+0.9	2.4	phosphate ABC transporter ATP-binding protein
BPHYT_RS23875		+0.9	0.9	sugar ABC transporter ATP-binding protein
BPHYT_RS10320		+0.9	4.3	hypothetical protein
BPHYT_RS18340		+0.9	1.1	n-acetyl-gamma-glutamyl-phosphate reductase
BPHYT_RS14895		+0.9	1.3	3-phosphoshikimate 1-carboxyvinyltransferase
BPHYT_RS13325		+0.9	1.2	TetR family transcriptional regulator
BPHYT_RS00815		+0.9	0.9	hypothetical protein
BPHYT_RS02530		+0.9	5.3	hypothetical protein
BPHYT_RS08405		+0.9	1.4	hypothetical protein
BPHYT_RS03505		+0.9	1.1	FAD-binding protein
BPHYT_RS06390		+0.9	1.6	ribosome-associated protein IOJAP
BPHYT_RS16175		+0.9	0.5	hemolysin D
BPHYT_RS23455		+0.9	0.8	phosphorylase
BPHYT_RS17885		+0.9	2.1	3-dehydroquinate synthase
BPHYT_RS30415		+0.8	1.6	AraC family transcriptional regulator
BPHYT_RS21215		+0.8	2.7	Crp/Fnr family transcriptional regulator
BPHYT_RS08510		+0.8	1.4	acyl-CoA dehydrogenase
BPHYT_RS06105		+0.8	1.1	hypothetical protein
BPHYT_RS34445		+0.8	2.5	GntR family transcriptional regulator
BPHYT_RS03875		+0.8	1.4	dehydrogenase
BPHYT_RS12785		+0.8	1.6	Rrf2 family transcriptional regulator
BPHYT_RS02635		+0.8	5.2	membrane protein
BPHYT_RS34895		+0.8	2.8	endonuclease
BPHYT_RS28605		+0.8	0.9	NADPH-dependent FMN reductase
BPHYT_RS30845		+0.8	1.0	polyketide cyclase
BPHYT_RS05905		+0.8	0.8	hypothetical protein
BPHYT_RS04015		+0.8	1.7	glycosyl transferase
BPHYT_RS06840		+0.8	2.6	hypothetical protein
BPHYT_RS01170		+0.8	1.3	hypothetical protein
BPHYT_RS01435		+0.8	7.0	LysR family transcriptional regulator
BPHYT_RS25885		+0.8	1.3	type III secretion protein
BPHYT_RS35785		+0.8	1.3	glucose-1-dehydrogenase
BPHYT_RS20105		+0.8	2.2	nitrate ABC transporter substrate-binding protein
BPHYT_RS32735		+0.8	2.0	hypothetical protein
BPHYT_RS06990		+0.8	0.6	membrane protein

Specific Phenotypes

For 1 genes in this experiment