Experiment set39S450 for Burkholderia phytofirmans PsJN

200 most detrimental genes:

gene	name	fitness	t score	description
BPHYT_RS11705		+3.8	2.7	hypothetical protein
BPHYT_RS19565		+3.1	21.3	gamma-glutamyl:cysteine ligase
BPHYT_RS14140		+3.0	6.4	phosphate transporter permease subunit PstC
BPHYT_RS19570		+3.0	25.2	sodium/hydrogen exchanger
BPHYT_RS33820		+2.7	25.9	histidine kinase
BPHYT_RS04945		+2.6	23.1	membrane protein
BPHYT_RS14400		+2.5	7.8	anti-sigma factor
BPHYT_RS04950		+2.5	21.9	hypothetical protein
BPHYT_RS18655		+2.4	6.2	3-oxoacyl-ACP synthase
BPHYT_RS06530		+2.3	2.6	membrane protein
BPHYT_RS02905		+2.3	21.2	RNA polymerase subunit sigma-54
BPHYT_RS25935		+2.2	1.5	type III secretion protein
BPHYT_RS12550		+2.2	1.7	GTP-binding protein HflX
BPHYT_RS05590		+2.2	17.7	trehalose-6-phosphate synthase
BPHYT_RS05575		+2.2	14.8	Fis family transcriptional regulator
BPHYT_RS09500		+2.1	9.9	glucose-6-phosphate isomerase
BPHYT_RS14395		+2.1	9.6	sugar dehydratase
BPHYT_RS14855		+2.1	1.0	ADP-L-glycero-D-manno-heptose-6-epimerase
BPHYT_RS16710		+2.0	0.9	LysR family transcriptional regulator
BPHYT_RS02595		+2.0	2.9	sulfurtransferase
BPHYT_RS05560		+2.0	13.4	Fis family transcriptional regulator
BPHYT_RS09330		+2.0	16.0	phytoene synthase
BPHYT_RS26025		+2.0	1.4	hypothetical protein
BPHYT_RS12845		+1.9	15.4	ATPase
BPHYT_RS33920		+1.9	13.0	type II citrate synthase
BPHYT_RS29320		+1.9	1.4	histidine kinase
BPHYT_RS05155		+1.9	8.0	acetyltransferase GCN5
BPHYT_RS25335		+1.9	1.4	hypothetical protein
BPHYT_RS09815		+1.8	3.4	malate synthase
BPHYT_RS04940		+1.8	3.7	hypothetical protein
BPHYT_RS06075		+1.8	10.7	hypothetical protein
BPHYT_RS13645		+1.8	15.4	threonine--tRNA ligase
BPHYT_RS06985		+1.7	11.3	fumarate hydratase
BPHYT_RS27890		+1.7	0.9	hypothetical protein
BPHYT_RS25095		+1.7	3.2	AraC family transcriptional regulator
BPHYT_RS05615		+1.7	1.5	hypothetical protein
BPHYT_RS10065		+1.7	1.8	cytochrome C oxidase subunit I
BPHYT_RS09660		+1.7	8.8	trehalose-6-phosphate synthase
BPHYT_RS22835		+1.6	2.1	flagellar motor protein MotA
BPHYT_RS01455		+1.6	2.0	peptide deformylase
BPHYT_RS15620		+1.6	4.0	peptidyl-prolyl cis-trans isomerase
BPHYT_RS06375		+1.6	3.8	ribonuclease
BPHYT_RS23910		+1.6	3.8	phosphoribosyl-dephospho-CoA transferase
BPHYT_RS03455		+1.6	4.4	paraquat-inducible protein A
BPHYT_RS05610		+1.5	10.2	DNA-cytosine methyltransferase
BPHYT_RS05025		+1.5	2.0	sugar ABC transporter substrate-binding protein
BPHYT_RS16175		+1.5	1.3	hemolysin D
BPHYT_RS12725		+1.5	12.2	regulator
BPHYT_RS25500		+1.5	1.6	hypothetical protein
BPHYT_RS11815		+1.5	2.0	alcohol dehydrogenase
BPHYT_RS34185		+1.5	3.9	cold-shock protein
BPHYT_RS28670		+1.5	1.8	MFS transporter
BPHYT_RS14145		+1.5	8.3	phosphate ABC transporter substrate-binding protein
BPHYT_RS23875		+1.5	1.8	sugar ABC transporter ATP-binding protein
BPHYT_RS25955		+1.4	1.8	transcriptional regulator
BPHYT_RS20790		+1.4	1.4	TetR family transcriptional regulator
BPHYT_RS12465		+1.4	3.1	inositol monophosphatase
BPHYT_RS08415		+1.4	1.6	hypothetical protein
BPHYT_RS12150		+1.4	9.7	PII uridylyl-transferase
BPHYT_RS07325		+1.4	0.7	GntR family transcriptional regulator
BPHYT_RS12840		+1.4	3.6	pyruvate dehydrogenase
BPHYT_RS03620		+1.4	8.1	poly(A) polymerase
BPHYT_RS08945		+1.4	12.2	hypothetical protein
BPHYT_RS18910		+1.4	1.7	FlgN
BPHYT_RS06175		+1.4	2.5	LPS biosynthesis
BPHYT_RS17095		+1.4	3.9	proline--tRNA ligase
BPHYT_RS06975		+1.3	1.5	glutamate racemase
BPHYT_RS01170		+1.3	3.0	hypothetical protein
BPHYT_RS14485		+1.2	5.3	ribonuclease E
BPHYT_RS07960		+1.2	1.2	hypothetical protein
BPHYT_RS26775		+1.2	1.7	chemotaxis protein CheB
BPHYT_RS17490		+1.2	1.1	haloacid dehalogenase
BPHYT_RS12900		+1.2	1.5	transposase
BPHYT_RS14135		+1.2	5.4	phosphate transporter permease subunit PtsA
BPHYT_RS07840		+1.2	1.1	muconate cycloisomerase
BPHYT_RS31615		+1.2	1.3	thiamine pyrophosphate protein
BPHYT_RS00150		+1.2	1.9	DEAD/DEAH box helicase
BPHYT_RS16390		+1.2	4.2	MarR family transcriptional regulator
BPHYT_RS26685		+1.2	1.0	precorrin-8X methylmutase
BPHYT_RS12990		+1.2	2.9	iron transporter
BPHYT_RS03725		+1.2	0.8	serine hydroxymethyltransferase
BPHYT_RS03015		+1.2	1.4	aldolase
BPHYT_RS12535		+1.2	0.9	membrane protein
BPHYT_RS03505		+1.2	2.0	FAD-binding protein
BPHYT_RS16675		+1.2	1.3	dihydroorotase
BPHYT_RS08850		+1.2	0.5	transcriptional regulator
BPHYT_RS10095		+1.2	1.1	integrase
BPHYT_RS06470		+1.2	1.5	membrane protein
BPHYT_RS28065		+1.2	1.7	hypothetical protein
BPHYT_RS03235		+1.2	2.4	enoyl-CoA hydratase
BPHYT_RS16340		+1.2	3.5	succinyl-CoA synthetase subunit alpha
BPHYT_RS17860		+1.1	1.8	transposase
BPHYT_RS09640		+1.1	4.4	DNAase
BPHYT_RS17035		+1.1	1.1	sugar kinase
BPHYT_RS02525		+1.1	6.8	membrane protein
BPHYT_RS30750		+1.1	1.3	GntR family transcriptional regulator
BPHYT_RS02640		+1.1	8.3	cytochrome C oxidase
BPHYT_RS16335		+1.1	2.9	membrane protein
BPHYT_RS30865		+1.1	2.3	sugar ABC transporter ATP-binding protein
BPHYT_RS05705		+1.1	1.2	hypothetical protein
BPHYT_RS18340		+1.1	1.0	n-acetyl-gamma-glutamyl-phosphate reductase
BPHYT_RS01620		+1.1	4.8	sensor histidine kinase
BPHYT_RS02865		+1.1	0.7	hypothetical protein
BPHYT_RS34025		+1.1	1.4	hypothetical protein
BPHYT_RS29720		+1.1	1.5	molybdopterin-guanine dinucleotide biosynthesis protein MobA
BPHYT_RS04290		+1.1	0.6	glycosyl transferase family 2
BPHYT_RS28910		+1.1	1.9	diguanylate phosphodiesterase
BPHYT_RS26030		+1.1	1.6	cysteine hydrolase
BPHYT_RS16060		+1.1	3.5	ribonucleotide-diphosphate reductase subunit alpha
BPHYT_RS17100		+1.1	4.2	RNA pyrophosphohydrolase
BPHYT_RS01965		+1.1	1.5	tRNA-Ala
BPHYT_RS23155		+1.1	1.5	Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) (from data)
BPHYT_RS21700		+1.1	1.3	phosphotransacetylase
BPHYT_RS20220		+1.1	1.5	antibiotic synthesis protein MbtH
BPHYT_RS28410		+1.1	1.8	ubiquinol oxidase subunit II, cyanide insensitive
BPHYT_RS00920		+1.1	2.2	transposase
BPHYT_RS36540		+1.1	3.0	hypothetical protein
BPHYT_RS09345		+1.1	3.1	TetR family transcriptional regulator
BPHYT_RS10230		+1.1	1.8	hypothetical protein
BPHYT_RS28470		+1.1	1.1	hypothetical protein
BPHYT_RS26780		+1.1	8.2	chemotaxis protein CheR
BPHYT_RS16345		+1.0	3.2	succinyl-CoA ligase [ADP-forming] subunit beta
BPHYT_RS17545		+1.0	4.4	cold-shock protein
BPHYT_RS02880		+1.0	1.5	ATP-dependent protease
BPHYT_RS03625		+1.0	5.0	Histidinol-phosphatase (EC:3.1.3.15) (from data)
BPHYT_RS12635		+1.0	2.0	translation factor Sua5
BPHYT_RS18635		+1.0	1.4	LamB/YcsF family protein
BPHYT_RS02765		+1.0	1.0	cytochrome BD oxidase subunit I
BPHYT_RS06390		+1.0	1.6	ribosome-associated protein IOJAP
BPHYT_RS04285		+1.0	0.5	rhamnosyltransferase
BPHYT_RS10635		+1.0	1.9	transcriptional regulator
BPHYT_RS07690		+1.0	1.6	AraC family transcriptional regulator
BPHYT_RS13815		+1.0	1.5	hypothetical protein
BPHYT_RS16880		+1.0	1.0	malic enzyme
BPHYT_RS11235		+1.0	0.9	hypothetical protein
BPHYT_RS10205		+1.0	2.9	D-lactate dehydrogenase
BPHYT_RS10015		+1.0	2.3	NAD(P)H dehydrogenase (quinone)
BPHYT_RS25490		+1.0	3.3	hypothetical protein
BPHYT_RS11535		+1.0	2.1	membrane protein
BPHYT_RS03480		+1.0	3.1	ferritin
BPHYT_RS26930		+1.0	3.0	mechanosensitive ion channel protein
BPHYT_RS16065		+1.0	0.7	LacI family transcriptional regulator
BPHYT_RS31635		+1.0	2.2	choline dehydrogenase
BPHYT_RS14340		+1.0	5.9	Fis family transcriptional regulator
BPHYT_RS06195		+1.0	1.2	membrane protein
BPHYT_RS33390		+1.0	1.6	phosphate ABC transporter substrate-binding protein
BPHYT_RS34485		+1.0	1.7	diguanylate phosphodiesterase
BPHYT_RS05585		+1.0	3.7	hypothetical protein
BPHYT_RS10320		+1.0	3.3	hypothetical protein
BPHYT_RS25140		+1.0	1.7	hypothetical protein
BPHYT_RS02480		+1.0	1.2	alkaline phosphatase
BPHYT_RS14245		+1.0	0.6	membrane protein
BPHYT_RS21475		+1.0	1.1	hypothetical protein
BPHYT_RS29410		+1.0	2.2	HPr kinase
BPHYT_RS28075		+1.0	1.2	cytochrome B561
BPHYT_RS14380		+0.9	3.3	elongation factor 4
BPHYT_RS26510		+0.9	1.3	transcriptional regulator
BPHYT_RS33400		+0.9	1.8	magnesium transporter CorA
BPHYT_RS18600		+0.9	1.5	glutathione S-transferase
BPHYT_RS11455		+0.9	3.4	manganese transporter
BPHYT_RS34495		+0.9	2.4	phenol degradation protein meta
BPHYT_RS09160		+0.9	4.0	polyhydroxyalkanoate synthesis repressor PhaR
BPHYT_RS07300		+0.9	2.2	porin
BPHYT_RS01505		+0.9	1.3	7-cyano-7-deazaguanine reductase
BPHYT_RS26330		+0.9	2.1	hypothetical protein
BPHYT_RS15290		+0.9	2.1	tRNA-Arg
BPHYT_RS01815		+0.9	3.4	sugar ABC transporter permease
BPHYT_RS17975		+0.9	2.3	cytochrome C biogenesis protein
BPHYT_RS11020		+0.9	1.4	transporter
BPHYT_RS14130		+0.9	2.4	phosphate ABC transporter ATP-binding protein
BPHYT_RS11895		+0.9	2.3	peroxiredoxin
BPHYT_RS28280		+0.9	0.8	hypothetical protein
BPHYT_RS03450		+0.9	4.0	paraquat-inducible protein A
BPHYT_RS11495		+0.9	1.5	membrane protein
BPHYT_RS15890		+0.9	0.9	3-hydroxy-2-methylbutyryl-CoA dehydrogenase
BPHYT_RS14740		+0.9	4.6	threonine-phosphate decarboxylase
BPHYT_RS34680		+0.9	4.2	hypothetical protein
BPHYT_RS26695		+0.9	2.6	cobalamin biosynthesis protein CbiG
BPHYT_RS20105		+0.9	1.4	nitrate ABC transporter substrate-binding protein
BPHYT_RS25395		+0.9	1.8	3-oxoacyl-ACP reductase
BPHYT_RS05655		+0.9	2.4	membrane protein
BPHYT_RS31245		+0.9	1.5	peptide ABC transporter ATP-binding protein
BPHYT_RS16180		+0.9	0.5	TetR family transcriptional regulator
BPHYT_RS22455		+0.9	0.6	phosphonate ABC transporter substrate-binding protein
BPHYT_RS19770		+0.9	1.7	ArsR family transcriptional regulator
BPHYT_RS35265		+0.9	3.2	LysR family transcriptional regulator
BPHYT_RS10115		+0.9	1.2	hypothetical protein
BPHYT_RS26040		+0.9	1.8	cysteine hydrolase
BPHYT_RS02435		+0.9	1.5	hypothetical protein
BPHYT_RS16815		+0.9	1.3	ureidoglycolate hydrolase
BPHYT_RS30860		+0.9	0.9	sugar ABC transporter permease
BPHYT_RS30720		+0.8	0.6	hypothetical protein
BPHYT_RS30990		+0.8	1.3	dTDP-4-dehydrorhamnose 3,5-epimerase
BPHYT_RS22135		+0.8	1.2	3-ketoacyl-ACP reductase
BPHYT_RS26400		+0.8	1.9	sodium:solute symporter
BPHYT_RS36150		+0.8	1.8	hypothetical protein
BPHYT_RS07540		+0.8	0.7	hypothetical protein
BPHYT_RS07130		+0.8	1.3	biopolymer transporter ExbD
BPHYT_RS07860		+0.8	0.8	benzoate 1,2-dioxygenase subunit beta
BPHYT_RS01435		+0.8	7.1	LysR family transcriptional regulator

Specific Phenotypes

For 1 genes in this experiment