Experiment set39S447 for Burkholderia phytofirmans PsJN

Compare to:

36hr PHYTO9 MOI 0.1

200 most important genes:

  gene name fitness t score description  
BPHYT_RS10305 -4.5 -1.6 hypothetical protein compare
BPHYT_RS08385 -4.2 -1.5 secretion protein compare
BPHYT_RS03255 -3.8 -2.7 glutathione S-transferase compare
BPHYT_RS10650 -3.6 -1.2 membrane protein compare
BPHYT_RS26465 -3.5 -1.2 metallophosphoesterase compare
BPHYT_RS26185 -3.4 -1.2 thioesterase compare
BPHYT_RS26750 -3.2 -1.6 aldolase compare
BPHYT_RS12510 -3.2 -1.8 RNA-binding protein compare
BPHYT_RS07540 -3.2 -1.1 hypothetical protein compare
BPHYT_RS10135 -3.1 -1.1 hypothetical protein compare
BPHYT_RS11825 -3.1 -1.1 cytosine deaminase compare
BPHYT_RS29920 -3.0 -1.0 hypothetical protein compare
BPHYT_RS00690 -3.0 -1.0 transcriptional regulator compare
BPHYT_RS25340 -2.9 -1.6 sulfatase compare
BPHYT_RS09860 -2.8 -1.0 pilus assembly protein PilP compare
BPHYT_RS19610 -2.7 -1.3 general secretion pathway protein GspC compare
BPHYT_RS12925 -2.7 -0.9 exodeoxyribonuclease III compare
BPHYT_RS01625 -2.7 -1.8 chemotaxis protein CheY compare
BPHYT_RS22815 -2.6 -1.9 TonB-denpendent receptor compare
BPHYT_RS18590 -2.6 -0.9 hypothetical protein compare
BPHYT_RS26380 -2.5 -1.5 cobalamin biosynthesis protein CobT compare
BPHYT_RS22940 -2.5 -1.4 pilus assembly protein TadE compare
BPHYT_RS14060 -2.5 -1.4 peptidase M23 compare
BPHYT_RS24315 -2.4 -1.4 phosphoribosyltransferase compare
BPHYT_RS11635 -2.4 -0.8 RNA polymerase subunit sigma-24 compare
BPHYT_RS02765 -2.4 -1.4 cytochrome BD oxidase subunit I compare
BPHYT_RS13080 -2.4 -1.6 hypothetical protein compare
BPHYT_RS04365 -2.4 -7.3 membrane protein compare
BPHYT_RS26375 -2.4 -1.4 ATPase AAA compare
BPHYT_RS07595 -2.3 -1.6 membrane protein compare
BPHYT_RS23990 -2.3 -1.1 N-hydroxyarylamine O-acetyltransferase compare
BPHYT_RS04350 -2.3 -8.8 membrane protein compare
BPHYT_RS25335 -2.3 -0.8 hypothetical protein compare
BPHYT_RS01455 -2.2 -1.0 peptide deformylase compare
BPHYT_RS04865 -2.1 -1.9 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase compare
BPHYT_RS26025 -2.1 -0.7 hypothetical protein compare
BPHYT_RS03280 -2.1 -1.0 mannose-1-phosphate guanylyltransferase compare
BPHYT_RS10005 -2.1 -1.0 hypothetical protein compare
BPHYT_RS10540 -2.1 -1.0 secretion protein compare
BPHYT_RS29655 -2.1 -2.0 polysaccharide deacetylase compare
BPHYT_RS30055 -2.1 -1.7 hypothetical protein compare
BPHYT_RS16180 -2.0 -0.7 TetR family transcriptional regulator compare
BPHYT_RS22885 -2.0 -2.8 hypothetical protein compare
BPHYT_RS27060 -2.0 -1.5 photosystem reaction center subunit H compare
BPHYT_RS11075 -2.0 -2.7 membrane protein compare
BPHYT_RS06710 -1.9 -0.9 hypothetical protein compare
BPHYT_RS10095 -1.9 -1.5 integrase compare
BPHYT_RS11970 -1.9 -1.1 cupin compare
BPHYT_RS11745 -1.9 -0.9 (2Fe-2S)-binding protein compare
BPHYT_RS20235 -1.9 -4.3 iron ABC transporter compare
BPHYT_RS04330 -1.8 -7.9 hypothetical protein compare
BPHYT_RS09000 -1.8 -0.9 competence protein ComE compare
BPHYT_RS28840 -1.8 -2.3 oxidoreductase compare
BPHYT_RS25400 -1.8 -2.0 butyryl-CoA dehydrogenase compare
BPHYT_RS25500 -1.7 -1.3 hypothetical protein compare
BPHYT_RS09515 -1.7 -1.7 phosphoribosylformylglycinamidine synthase compare
BPHYT_RS08545 -1.7 -1.0 oxidoreductase compare
BPHYT_RS25780 -1.7 -0.6 DeoR faimly transcriptional regulator compare
BPHYT_RS28470 -1.7 -0.8 hypothetical protein compare
BPHYT_RS20970 -1.7 -1.0 hypothetical protein compare
BPHYT_RS20155 -1.7 -0.8 hypothetical protein compare
BPHYT_RS10120 -1.7 -1.9 membrane protein compare
BPHYT_RS08410 -1.6 -0.8 dehydrogenase compare
BPHYT_RS07660 -1.6 -1.5 sulfonate ABC transporter substrate-binding protein compare
BPHYT_RS17760 -1.6 -5.4 ABC transporter permease compare
BPHYT_RS35750 -1.6 -1.3 hypothetical protein compare
BPHYT_RS27920 -1.6 -0.8 tricarballylate utilization protein B compare
BPHYT_RS03170 -1.6 -0.9 membrane protein compare
BPHYT_RS25605 -1.6 -2.6 symporter compare
BPHYT_RS02130 -1.6 -1.9 hydroxymethylglutaryl-CoA lyase compare
BPHYT_RS34780 -1.6 -1.9 phytoene synthase compare
BPHYT_RS02815 -1.5 -2.6 methyltransferase compare
BPHYT_RS14245 -1.5 -0.7 membrane protein compare
BPHYT_RS02365 -1.5 -1.2 hypothetical protein compare
BPHYT_RS29175 -1.5 -1.9 ABC transporter ATP-binding protein compare
BPHYT_RS21330 -1.5 -1.1 hypothetical protein compare
BPHYT_RS09905 -1.5 -0.7 hypothetical protein compare
BPHYT_RS06990 -1.5 -0.7 membrane protein compare
BPHYT_RS30800 -1.5 -1.0 MFS transporter compare
BPHYT_RS14550 -1.5 -0.7 tRNA-Asn compare
BPHYT_RS11155 -1.5 -0.9 hypothetical protein compare
BPHYT_RS32860 -1.5 -0.7 hypothetical protein compare
BPHYT_RS22765 -1.5 -1.9 beta-galactosidase compare
BPHYT_RS11095 -1.5 -2.2 glycosyl transferase compare
BPHYT_RS31590 -1.5 -1.1 hypothetical protein compare
BPHYT_RS10950 -1.4 -2.4 transcriptional regulator compare
BPHYT_RS17265 -1.4 -1.0 cell division protein compare
BPHYT_RS25270 -1.4 -1.6 multidrug MFS transporter compare
BPHYT_RS30415 -1.4 -1.1 AraC family transcriptional regulator compare
BPHYT_RS22360 -1.4 -1.1 response regulator receiver compare
BPHYT_RS32815 -1.4 -2.0 sugar ABC transporter compare
BPHYT_RS35635 -1.4 -3.0 nucleoside 2-deoxyribosyltransferase compare
BPHYT_RS34655 -1.4 -1.0 2-amino-3-ketobutyrate CoA ligase compare
BPHYT_RS25165 -1.4 -1.1 HTH-type transcriptional regulator BetI compare
BPHYT_RS20150 -1.4 -1.9 glycosyl transferase family 1 compare
BPHYT_RS13565 -1.4 -2.2 bacterioferritin compare
BPHYT_RS25770 -1.4 -0.6 hypothetical protein compare
BPHYT_RS09655 -1.4 -3.7 mechanosensitive ion channel protein MscS compare
BPHYT_RS17745 -1.4 -5.7 toluene tolerance family protein compare
BPHYT_RS03110 -1.4 -1.9 MarR family transcriptional regulator compare
BPHYT_RS31415 -1.3 -1.0 amino acid ABC transporter permease compare
BPHYT_RS06975 -1.3 -0.9 glutamate racemase compare
BPHYT_RS22720 -1.3 -2.8 LysR family transcriptional regulator compare
BPHYT_RS26880 -1.3 -1.2 ketosteroid isomerase compare
BPHYT_RS28955 -1.3 -1.0 hypothetical protein compare
BPHYT_RS27125 -1.3 -0.9 hypothetical protein compare
BPHYT_RS28630 -1.3 -1.7 IclR family transcriptional regulator compare
BPHYT_RS27065 -1.3 -1.0 hypothetical protein compare
BPHYT_RS10395 -1.3 -1.3 sulfonate ABC transporter compare
BPHYT_RS27430 -1.3 -0.8 LysR family transcriptional regulator compare
BPHYT_RS17765 -1.3 -3.6 toluene ABC transporter ATP-binding protein compare
BPHYT_RS12060 -1.3 -1.1 hypothetical protein compare
BPHYT_RS20245 -1.2 -2.7 iron ABC transporter substrate-binding protein compare
BPHYT_RS09465 -1.2 -0.9 transcriptional regulator compare
BPHYT_RS14865 -1.2 -1.0 UDP-glucose 6-dehydrogenase compare
BPHYT_RS28690 -1.2 -1.3 diguanylate phosphodiesterase compare
BPHYT_RS02285 -1.2 -3.2 cell division protein compare
BPHYT_RS16215 -1.2 -2.7 sensor histidine kinase compare
BPHYT_RS23155 -1.2 -0.9 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) (from data) compare
BPHYT_RS30610 -1.2 -1.3 major facilitator transporter compare
BPHYT_RS26975 -1.2 -0.9 L-lactate dehydrogenase, LldE subunit (from data) compare
BPHYT_RS36275 -1.2 -0.7 hypothetical protein compare
BPHYT_RS21335 -1.2 -0.8 CDP-alcohol phosphatidyltransferase compare
BPHYT_RS17630 -1.2 -3.8 ubiquinol-cytochrome C reductase compare
BPHYT_RS05315 -1.2 -2.6 hydrolase compare
BPHYT_RS01485 -1.2 -0.9 histidine kinase compare
BPHYT_RS21975 -1.2 -1.3 2-dehydropantoate 2-reductase compare
BPHYT_RS10895 -1.2 -1.9 transcriptional regulator compare
BPHYT_RS34030 -1.2 -2.5 pilus assembly protein CpaB compare
BPHYT_RS17755 -1.2 -4.3 ABC transporter substrate-binding protein compare
BPHYT_RS36525 -1.2 -1.0 hypothetical protein compare
BPHYT_RS14505 -1.2 -1.2 membrane protein compare
BPHYT_RS30040 -1.2 -0.7 hypothetical protein compare
BPHYT_RS11980 -1.1 -1.9 LysR family transcriptional regulator compare
BPHYT_RS30160 -1.1 -1.6 AraC family transcriptional regulator compare
BPHYT_RS22455 -1.1 -0.5 phosphonate ABC transporter substrate-binding protein compare
BPHYT_RS23415 -1.1 -2.4 GDSL family lipase compare
BPHYT_RS28285 -1.1 -1.1 MFS transporter compare
BPHYT_RS03740 -1.1 -1.3 hypothetical protein compare
BPHYT_RS27570 -1.1 -1.9 universal stress protein UspA compare
BPHYT_RS10400 -1.1 -0.7 taurine ABC transporter permease compare
BPHYT_RS04340 -1.1 -1.3 hypothetical protein compare
BPHYT_RS25080 -1.1 -0.9 glycine/betaine ABC transporter substrate-binding protein compare
BPHYT_RS31255 -1.1 -0.8 cytochrome B561 compare
BPHYT_RS15075 -1.1 -0.6 dihydrokaempferol 4-reductase compare
BPHYT_RS14670 -1.1 -0.7 hypothetical protein compare
BPHYT_RS04955 -1.1 -1.6 methionyl-tRNA synthetase compare
BPHYT_RS10945 -1.1 -0.9 2-deoxy-D-gluconate 3-dehydrogenase compare
BPHYT_RS16555 -1.1 -1.3 cation transporter compare
BPHYT_RS27175 -1.1 -0.7 DNA-binding protein compare
BPHYT_RS22840 -1.1 -1.4 motility protein B compare
BPHYT_RS09960 -1.1 -1.8 short-chain dehydrogenase compare
BPHYT_RS33035 -1.1 -1.8 murein transglycosylase compare
BPHYT_RS11395 -1.1 -1.7 hypothetical protein compare
BPHYT_RS28325 -1.1 -1.4 NADPH-dependent FMN reductase compare
BPHYT_RS26435 -1.1 -0.5 hypothetical protein compare
BPHYT_RS05905 -1.1 -0.6 hypothetical protein compare
BPHYT_RS29870 -1.1 -0.8 2-dehydropantoate 2-reductase compare
BPHYT_RS35835 -1.1 -1.5 hypothetical protein compare
BPHYT_RS04095 -1.1 -0.6 SAM-dependent methyltransferase PhcB compare
BPHYT_RS26005 -1.1 -1.3 MarR family transcriptional regulator compare
BPHYT_RS23460 -1.0 -0.5 AraC family transcriptional regulator compare
BPHYT_RS22530 -1.0 -1.0 N5,N10-methylene tetrahydromethanopterin reductase compare
BPHYT_RS31830 -1.0 -1.5 hypothetical protein compare
BPHYT_RS28155 -1.0 -1.8 hypothetical protein compare
BPHYT_RS23325 -1.0 -1.6 ribonuclease compare
BPHYT_RS29150 -1.0 -1.6 lysine transporter LysE compare
BPHYT_RS01425 -1.0 -1.8 3-phosphoglycerate dehydrogenase compare
BPHYT_RS02575 -1.0 -5.2 phosphoenolpyruvate-protein phosphotransferase compare
BPHYT_RS03745 -1.0 -3.4 cleavage protein compare
BPHYT_RS34245 -1.0 -1.2 ABC transporter for L-rhamnose/L-fucose/xylitol, ATPase component (from data) compare
BPHYT_RS10760 -1.0 -1.7 major facilitator transporter compare
BPHYT_RS27715 -1.0 -1.0 UspA domain-containing protein compare
BPHYT_RS13265 -1.0 -2.1 hypothetical protein compare
BPHYT_RS09585 -1.0 -1.0 hypothetical protein compare
BPHYT_RS31040 -1.0 -1.0 sugar transporter compare
BPHYT_RS10695 -1.0 -0.8 aromatic-ring-hydroxylating dioxygenase subunit beta compare
BPHYT_RS06685 -1.0 -1.9 NADH:ubiquinone oxidoreductase subunit M compare
BPHYT_RS07600 -1.0 -1.8 amino acid ABC transporter substrate-binding protein compare
BPHYT_RS22010 -1.0 -2.6 ABC transporter permease compare
BPHYT_RS16475 -1.0 -1.8 hypothetical protein compare
BPHYT_RS20065 -1.0 -1.3 hypothetical protein compare
BPHYT_RS05285 -1.0 -0.7 hypothetical protein compare
BPHYT_RS13605 -1.0 -0.6 tRNA-Pro compare
BPHYT_RS10740 -1.0 -0.6 LuxR family transcriptional regulator compare
BPHYT_RS27330 -1.0 -0.8 hypothetical protein compare
BPHYT_RS22990 -1.0 -2.5 nucleobase:cation symporter compare
BPHYT_RS25210 -1.0 -0.7 drug:proton antiporter compare
BPHYT_RS15090 -1.0 -2.6 xanthine dehydrogenase accessory protein XdhC compare
BPHYT_RS12825 -1.0 -1.3 phasin family protein compare
BPHYT_RS19270 -1.0 -1.8 hypothetical protein compare
BPHYT_RS13470 -1.0 -0.5 arylsulfate sulfotransferase compare
BPHYT_RS31150 -1.0 -1.6 transcriptional regulator compare
BPHYT_RS21150 -1.0 -1.8 NAD(P) transhydrogenase subunit alpha compare
BPHYT_RS09245 -1.0 -1.4 ABC transporter ATP-binding protein compare
BPHYT_RS23650 -1.0 -0.5 hypothetical protein compare
BPHYT_RS09070 -1.0 -2.1 recombination protein RecR compare
BPHYT_RS19890 -1.0 -1.2 hypothetical protein compare
BPHYT_RS01630 -1.0 -0.6 ATP-dependent protease ATPase subunit HslU compare
BPHYT_RS28575 -1.0 -0.6 transcriptional regulator compare


Specific Phenotypes

None in this experiment

For Burkholderia phytofirmans PsJN in phage experiments