Experiment set39S447 for Burkholderia phytofirmans PsJN

200 most detrimental genes:

gene	name	fitness	t score	description
BPHYT_RS11705		+3.7	2.6	hypothetical protein
BPHYT_RS19570		+2.9	25.5	sodium/hydrogen exchanger
BPHYT_RS19565		+2.8	18.2	gamma-glutamyl:cysteine ligase
BPHYT_RS14140		+2.8	5.8	phosphate transporter permease subunit PstC
BPHYT_RS04370		+2.8	1.1	glycosyl transferase
BPHYT_RS25935		+2.5	1.9	type III secretion protein
BPHYT_RS33820		+2.4	23.4	histidine kinase
BPHYT_RS04945		+2.1	18.7	membrane protein
BPHYT_RS30995		+2.1	1.2	glucose-1-phosphate thymidylyltransferase
BPHYT_RS34025		+2.1	3.5	hypothetical protein
BPHYT_RS02905		+2.1	18.2	RNA polymerase subunit sigma-54
BPHYT_RS04950		+2.0	16.9	hypothetical protein
BPHYT_RS05575		+1.9	16.1	Fis family transcriptional regulator
BPHYT_RS04940		+1.9	4.4	hypothetical protein
BPHYT_RS14395		+1.8	7.2	sugar dehydratase
BPHYT_RS06530		+1.8	2.9	membrane protein
BPHYT_RS23910		+1.8	8.4	phosphoribosyl-dephospho-CoA transferase
BPHYT_RS05590		+1.7	13.7	trehalose-6-phosphate synthase
BPHYT_RS04990		+1.7	3.8	hypothetical protein
BPHYT_RS02595		+1.7	2.6	sulfurtransferase
BPHYT_RS05560		+1.6	8.4	Fis family transcriptional regulator
BPHYT_RS07840		+1.6	2.0	muconate cycloisomerase
BPHYT_RS12845		+1.6	12.8	ATPase
BPHYT_RS33920		+1.6	11.2	type II citrate synthase
BPHYT_RS19325		+1.6	3.0	glycine cleavage system H protein
BPHYT_RS13645		+1.6	13.9	threonine--tRNA ligase
BPHYT_RS18655		+1.6	5.2	3-oxoacyl-ACP synthase
BPHYT_RS17490		+1.5	3.6	haloacid dehalogenase
BPHYT_RS18910		+1.5	2.2	FlgN
BPHYT_RS17095		+1.5	6.0	proline--tRNA ligase
BPHYT_RS09330		+1.5	12.2	phytoene synthase
BPHYT_RS05155		+1.5	6.7	acetyltransferase GCN5
BPHYT_RS11170		+1.5	1.3	hypothetical protein
BPHYT_RS12550		+1.5	1.1	GTP-binding protein HflX
BPHYT_RS06075		+1.5	11.5	hypothetical protein
BPHYT_RS29520		+1.5	1.4	hypothetical protein
BPHYT_RS05610		+1.5	11.1	DNA-cytosine methyltransferase
BPHYT_RS26685		+1.5	1.2	precorrin-8X methylmutase
BPHYT_RS21475		+1.4	2.0	hypothetical protein
BPHYT_RS16065		+1.4	1.1	LacI family transcriptional regulator
BPHYT_RS07255		+1.4	3.9	4-oxalocrotonate decarboxylase
BPHYT_RS12985		+1.3	1.4	amino acid acetyltransferase
BPHYT_RS09815		+1.3	1.5	malate synthase
BPHYT_RS14400		+1.3	3.4	anti-sigma factor
BPHYT_RS02880		+1.3	2.0	ATP-dependent protease
BPHYT_RS09650		+1.3	1.5	hypothetical protein
BPHYT_RS06375		+1.3	3.3	ribonuclease
BPHYT_RS14485		+1.3	3.4	ribonuclease E
BPHYT_RS17240		+1.3	0.7	cell division protein FtsW
BPHYT_RS03015		+1.3	1.7	aldolase
BPHYT_RS12725		+1.3	10.6	regulator
BPHYT_RS16345		+1.3	2.9	succinyl-CoA ligase [ADP-forming] subunit beta
BPHYT_RS02865		+1.3	1.1	hypothetical protein
BPHYT_RS02300		+1.3	1.7	acid shock protein
BPHYT_RS31910		+1.3	1.0	hypothetical protein
BPHYT_RS30450		+1.3	1.0	ABC transporter permease
BPHYT_RS22265		+1.2	1.5	hypothetical protein
BPHYT_RS27145		+1.2	3.3	TetR family transcriptional regulator
BPHYT_RS05615		+1.2	1.0	hypothetical protein
BPHYT_RS06175		+1.2	3.5	LPS biosynthesis
BPHYT_RS09500		+1.2	2.8	glucose-6-phosphate isomerase
BPHYT_RS09660		+1.2	6.6	trehalose-6-phosphate synthase
BPHYT_RS10165		+1.2	1.2	transcriptional regulator
BPHYT_RS31225		+1.2	2.1	D-alanyl-D-alanine dipeptidase
BPHYT_RS31615		+1.2	1.5	thiamine pyrophosphate protein
BPHYT_RS18600		+1.2	2.2	glutathione S-transferase
BPHYT_RS10240		+1.2	1.3	translation initiation inhibitor
BPHYT_RS02975		+1.2	1.6	membrane protein
BPHYT_RS30990		+1.2	2.1	dTDP-4-dehydrorhamnose 3,5-epimerase
BPHYT_RS33695		+1.1	1.8	molybdenum ABC transporter ATPase
BPHYT_RS13200		+1.1	2.0	molybdopterin binding oxidoreductase
BPHYT_RS23250		+1.1	1.5	hypothetical protein
BPHYT_RS26300		+1.1	1.3	ATP-dependent DNA ligase
BPHYT_RS14145		+1.1	5.5	phosphate ABC transporter substrate-binding protein
BPHYT_RS11815		+1.1	1.7	alcohol dehydrogenase
BPHYT_RS32395		+1.1	0.9	hypothetical protein
BPHYT_RS31020		+1.1	2.1	3-deoxy-D-manno-octulosonate 8-phosphate phosphatase
BPHYT_RS14180		+1.1	1.0	membrane protein
BPHYT_RS23175		+1.1	1.8	gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase
BPHYT_RS11685		+1.1	1.0	phasin family protein
BPHYT_RS12150		+1.1	8.0	PII uridylyl-transferase
BPHYT_RS26925		+1.1	1.0	NIPSNAP family containing protein
BPHYT_RS06985		+1.1	5.1	fumarate hydratase
BPHYT_RS32115		+1.1	3.3	hypothetical protein
BPHYT_RS20220		+1.1	0.9	antibiotic synthesis protein MbtH
BPHYT_RS17035		+1.1	1.2	sugar kinase
BPHYT_RS02600		+1.1	1.5	glutaredoxin
BPHYT_RS30085		+1.1	1.4	hypothetical protein
BPHYT_RS31060		+1.1	1.5	capsular polysaccharide biosynthesis protein
BPHYT_RS34485		+1.1	2.0	diguanylate phosphodiesterase
BPHYT_RS30795		+1.1	1.3	short-chain dehydrogenase
BPHYT_RS04425		+1.1	1.7	UDP-phosphate galactose phosphotransferase
BPHYT_RS08995		+1.1	1.0	hypothetical protein
BPHYT_RS27625		+1.0	2.5	transport-associated protein
BPHYT_RS27690		+1.0	2.6	carbamate kinase
BPHYT_RS03620		+1.0	6.6	poly(A) polymerase
BPHYT_RS05670		+1.0	1.8	hypothetical protein
BPHYT_RS09640		+1.0	4.4	DNAase
BPHYT_RS24630		+1.0	1.6	(2Fe-2S)-binding protein
BPHYT_RS30775		+1.0	0.7	gluconate 2-dehydrogenase
BPHYT_RS25870		+1.0	0.8	type III secretion system ATPase
BPHYT_RS27370		+1.0	1.7	CoA transferase
BPHYT_RS23875		+1.0	1.2	sugar ABC transporter ATP-binding protein
BPHYT_RS33390		+1.0	1.9	phosphate ABC transporter substrate-binding protein
BPHYT_RS16175		+1.0	0.8	hemolysin D
BPHYT_RS30855		+1.0	2.3	sugar ABC transporter substrate-binding protein
BPHYT_RS03070		+1.0	5.2	LuxR family transcriptional regulator
BPHYT_RS16390		+1.0	3.5	MarR family transcriptional regulator
BPHYT_RS20115		+1.0	1.1	transcriptional regulator
BPHYT_RS20425		+1.0	2.5	hypothetical protein
BPHYT_RS15620		+1.0	2.8	peptidyl-prolyl cis-trans isomerase
BPHYT_RS06190		+1.0	1.1	heptosyltransferase
BPHYT_RS10690		+1.0	3.1	Rieske (2Fe-2S) protein
BPHYT_RS12265		+1.0	1.6	alanine acetyltransferase
BPHYT_RS34495		+1.0	2.6	phenol degradation protein meta
BPHYT_RS23030		+1.0	1.6	gluconate 2-dehydrogenase
BPHYT_RS02640		+1.0	7.6	cytochrome C oxidase
BPHYT_RS09280		+1.0	0.8	pyridoxal-5'-phosphate-dependent protein subunit beta
BPHYT_RS29720		+1.0	1.1	molybdopterin-guanine dinucleotide biosynthesis protein MobA
BPHYT_RS06390		+1.0	1.7	ribosome-associated protein IOJAP
BPHYT_RS21170		+1.0	0.7	LysR family transcriptional regulator
BPHYT_RS02505		+1.0	2.3	spermidine/putrescine ABC transporter ATPase
BPHYT_RS06195		+1.0	1.2	membrane protein
BPHYT_RS34185		+1.0	3.0	cold-shock protein
BPHYT_RS20900		+1.0	1.1	phytanoyl-CoA dioxygenase
BPHYT_RS14855		+1.0	0.4	ADP-L-glycero-D-manno-heptose-6-epimerase
BPHYT_RS32200		+1.0	2.2	lytic transglycosylase
BPHYT_RS25800		+0.9	1.5	sugar ABC transporter permease
BPHYT_RS14380		+0.9	2.7	elongation factor 4
BPHYT_RS31685		+0.9	2.0	D-isomer specific 2-hydroxyacid dehydrogenase
BPHYT_RS26930		+0.9	4.6	mechanosensitive ion channel protein
BPHYT_RS02965		+0.9	1.3	membrane protein
BPHYT_RS01620		+0.9	4.4	sensor histidine kinase
BPHYT_RS24220		+0.9	1.6	alpha/beta hydrolase
BPHYT_RS31205		+0.9	2.2	peptide ABC transporter ATP-binding protein
BPHYT_RS20025		+0.9	1.0	crotonase
BPHYT_RS08850		+0.9	0.5	transcriptional regulator
BPHYT_RS16815		+0.9	2.3	ureidoglycolate hydrolase
BPHYT_RS11265		+0.9	1.2	hypothetical protein
BPHYT_RS22215		+0.9	1.2	hypothetical protein
BPHYT_RS04400		+0.9	1.8	Crp/Fnr family transcriptional regulator
BPHYT_RS14130		+0.9	3.1	phosphate ABC transporter ATP-binding protein
BPHYT_RS28505		+0.9	1.6	5-deoxyglucuronate isomerase
BPHYT_RS27195		+0.9	2.0	LacI family transcriptional regulator
BPHYT_RS07705		+0.9	2.0	arginine succinyltransferase
BPHYT_RS26160		+0.9	1.8	membrane protein
BPHYT_RS08355		+0.9	1.0	hypothetical protein
BPHYT_RS25085		+0.9	2.7	sugar-binding protein
BPHYT_RS20475		+0.9	0.8	hypothetical protein
BPHYT_RS26015		+0.9	1.0	rod shape-determining protein MreB
BPHYT_RS12465		+0.9	1.6	inositol monophosphatase
BPHYT_RS35480		+0.9	1.8	salicylyl-CoA 5-hydroxylase
BPHYT_RS22580		+0.9	1.2	transcriptional regulator
BPHYT_RS27385		+0.9	3.1	DeoR family transcriptional regulator
BPHYT_RS09545		+0.9	0.9	peptide methionine sulfoxide reductase
BPHYT_RS24270		+0.9	1.1	C4-dicarboxylate ABC transporter substrate-binding protein
BPHYT_RS20440		+0.9	0.9	IclR family transcriptional regulator
BPHYT_RS21415		+0.9	1.5	3-oxoadipate CoA-transferase subunit A
BPHYT_RS28595		+0.9	0.9	glyoxalase
BPHYT_RS09445		+0.9	2.2	trigger factor
BPHYT_RS27660		+0.9	2.3	hypothetical protein
BPHYT_RS04885		+0.9	1.0	threonine-phosphate decarboxylase
BPHYT_RS31670		+0.9	3.3	transposase
BPHYT_RS04015		+0.9	1.6	glycosyl transferase
BPHYT_RS07060		+0.9	1.6	aldo/keto reductase
BPHYT_RS20790		+0.9	0.8	TetR family transcriptional regulator
BPHYT_RS25815		+0.8	1.2	deoxyribose-phosphate aldolase
BPHYT_RS28910		+0.8	1.3	diguanylate phosphodiesterase
BPHYT_RS28670		+0.8	0.9	MFS transporter
BPHYT_RS05025		+0.8	0.8	sugar ABC transporter substrate-binding protein
BPHYT_RS02525		+0.8	5.6	membrane protein
BPHYT_RS26675		+0.8	1.4	precorrin-6Y C5,15-methyltransferase
BPHYT_RS06320		+0.8	0.9	chemotaxis protein CheY
BPHYT_RS17835		+0.8	1.9	protein tyrosine phosphatase
BPHYT_RS04290		+0.8	0.5	glycosyl transferase family 2
BPHYT_RS36470		+0.8	1.3	hypothetical protein
BPHYT_RS02635		+0.8	5.4	membrane protein
BPHYT_RS34995		+0.8	1.6	MFS transporter
BPHYT_RS16335		+0.8	2.1	membrane protein
BPHYT_RS20515		+0.8	2.1	alpha/beta hydrolase
BPHYT_RS10320		+0.8	2.3	hypothetical protein
BPHYT_RS26770		+0.8	1.5	histidine kinase
BPHYT_RS18635		+0.8	1.4	LamB/YcsF family protein
BPHYT_RS22870		+0.8	0.7	copper transporter
BPHYT_RS20545		+0.8	1.0	hypothetical protein
BPHYT_RS24095		+0.8	2.4	membrane protein
BPHYT_RS17890		+0.8	1.0	shikimate kinase
BPHYT_RS07055		+0.8	2.2	sulfotransferase
BPHYT_RS15865		+0.8	1.2	exodeoxyribonuclease VII large subunit
BPHYT_RS10215		+0.8	0.7	sulfate transporter
BPHYT_RS22500		+0.8	1.4	transcriptional regulator
BPHYT_RS31050		+0.8	0.6	epimerase
BPHYT_RS23035		+0.8	1.2	hypothetical protein
BPHYT_RS24135		+0.8	1.8	alpha-dehydro-beta-deoxy-D-glucarate aldolase
BPHYT_RS33175		+0.8	1.0	hypothetical protein
BPHYT_RS22540		+0.8	1.6	metal ABC transporter permease
BPHYT_RS33995		+0.8	2.6	chemotaxis protein CheY
BPHYT_RS25645		+0.8	1.3	dehydrogenase
BPHYT_RS29605		+0.8	2.0	hypothetical protein
BPHYT_RS05320		+0.8	1.1	beta-lactamase

Specific Phenotypes

None in this experiment

For Burkholderia phytofirmans PsJN in phage experiments