Experiment set39S444 for Burkholderia phytofirmans PsJN

Compare to:

36hr PHYTO9 MOI 1

200 most important genes:

  gene name fitness t score description  
BPHYT_RS36525 -4.7 -1.6 hypothetical protein compare
BPHYT_RS24175 -3.9 -2.6 C4-dicarboxylate ABC transporter compare
BPHYT_RS23525 -3.7 -1.2 hypothetical protein compare
BPHYT_RS20440 -3.6 -1.2 IclR family transcriptional regulator compare
BPHYT_RS11235 -3.4 -1.1 hypothetical protein compare
BPHYT_RS18705 -3.3 -1.8 5,10-methylenetetrahydrofolate reductase compare
BPHYT_RS04965 -3.2 -7.2 ATP-binding protein compare
BPHYT_RS14550 -3.1 -1.0 tRNA-Asn compare
BPHYT_RS34490 -3.1 -1.0 hypothetical protein compare
BPHYT_RS11825 -3.1 -1.0 cytosine deaminase compare
BPHYT_RS21625 -3.1 -1.0 LysR family transcriptional regulator compare
BPHYT_RS29920 -3.0 -1.0 hypothetical protein compare
BPHYT_RS28600 -2.9 -1.3 ArsC family transcriptional regulator compare
BPHYT_RS26490 -2.9 -0.9 hypothetical protein compare
BPHYT_RS09280 -2.8 -0.9 pyridoxal-5'-phosphate-dependent protein subunit beta compare
BPHYT_RS12535 -2.7 -0.9 membrane protein compare
BPHYT_RS31050 -2.7 -0.9 epimerase compare
BPHYT_RS05650 -2.7 -1.5 hypothetical protein compare
BPHYT_RS23650 -2.6 -0.8 hypothetical protein compare
BPHYT_RS03875 -2.6 -2.2 dehydrogenase compare
BPHYT_RS16065 -2.5 -0.8 LacI family transcriptional regulator compare
BPHYT_RS03410 -2.4 -1.8 queuine tRNA-ribosyltransferase compare
BPHYT_RS04330 -2.4 -8.9 hypothetical protein compare
BPHYT_RS24315 -2.4 -1.3 phosphoribosyltransferase compare
BPHYT_RS33765 -2.3 -0.8 membrane protein compare
BPHYT_RS22135 -2.3 -1.3 3-ketoacyl-ACP reductase compare
BPHYT_RS16250 -2.3 -1.1 N5-carboxyaminoimidazole ribonucleotide mutase compare
BPHYT_RS29815 -2.3 -1.6 UDP-N-acetyl-D-mannosamine transferase compare
BPHYT_RS10710 -2.3 -1.5 sensor histidine kinase compare
BPHYT_RS08235 -2.2 -0.7 nucleoprotein, Hfg, host factor I compare
BPHYT_RS20665 -2.1 -0.7 LysR family transcriptional regulator compare
BPHYT_RS08340 -2.1 -1.7 chemotaxis protein CheY compare
BPHYT_RS18660 -2.1 -1.5 hypothetical protein compare
BPHYT_RS01485 -2.1 -1.2 histidine kinase compare
BPHYT_RS10945 -2.1 -1.4 2-deoxy-D-gluconate 3-dehydrogenase compare
BPHYT_RS29450 -2.1 -1.2 phosphonate metabolism protein compare
BPHYT_RS23475 -2.1 -0.9 luciferase compare
BPHYT_RS04350 -2.0 -7.6 membrane protein compare
BPHYT_RS16555 -2.0 -3.4 cation transporter compare
BPHYT_RS22910 -2.0 -0.6 hypothetical protein compare
BPHYT_RS22815 -2.0 -1.5 TonB-denpendent receptor compare
BPHYT_RS20245 -1.9 -3.3 iron ABC transporter substrate-binding protein compare
BPHYT_RS04365 -1.9 -7.6 membrane protein compare
BPHYT_RS10095 -1.9 -1.4 integrase compare
BPHYT_RS09355 -1.9 -1.2 LysR family transcriptional regulator compare
BPHYT_RS34860 -1.9 -2.3 chemotaxis protein compare
BPHYT_RS11955 -1.9 -1.7 hemolysin D compare
BPHYT_RS06350 -1.9 -1.2 chemotaxis protein CheY compare
BPHYT_RS23265 -1.9 -3.3 methylcrotonoyl-CoA carboxylase compare
BPHYT_RS27760 -1.8 -1.3 ABC transporter compare
BPHYT_RS10065 -1.8 -1.0 cytochrome C oxidase subunit I compare
BPHYT_RS25210 -1.8 -1.0 drug:proton antiporter compare
BPHYT_RS12615 -1.8 -0.6 dihydrodipicolinate synthase compare
BPHYT_RS34305 -1.8 -1.7 succinate-semialdehyde dehydrogenase compare
BPHYT_RS03945 -1.8 -1.9 hypothetical protein compare
BPHYT_RS20235 -1.8 -4.0 iron ABC transporter compare
BPHYT_RS35835 -1.7 -1.9 hypothetical protein compare
BPHYT_RS34780 -1.7 -1.9 phytoene synthase compare
BPHYT_RS11795 -1.7 -0.8 membrane protein compare
BPHYT_RS13160 -1.7 -1.0 membrane protein compare
BPHYT_RS14865 -1.7 -1.2 UDP-glucose 6-dehydrogenase compare
BPHYT_RS14505 -1.7 -1.3 membrane protein compare
BPHYT_RS29695 -1.7 -0.9 hypothetical protein compare
BPHYT_RS01625 -1.7 -1.8 chemotaxis protein CheY compare
BPHYT_RS17745 -1.7 -4.9 toluene tolerance family protein compare
BPHYT_RS08360 -1.7 -1.3 LysR family transcriptional regulator compare
BPHYT_RS08905 -1.6 -1.3 peroxiredoxin compare
BPHYT_RS02860 -1.6 -0.5 membrane protein compare
BPHYT_RS21025 -1.6 -0.9 cation-binding protein compare
BPHYT_RS17920 -1.6 -1.2 protein CyaY compare
BPHYT_RS20155 -1.6 -0.7 hypothetical protein compare
BPHYT_RS20090 -1.6 -1.7 nitrate ABC transporter substrate-binding protein compare
BPHYT_RS22930 -1.6 -0.7 type II secretion system protein compare
BPHYT_RS13080 -1.6 -1.2 hypothetical protein compare
BPHYT_RS23430 -1.6 -1.3 bifunctional D-altronate/D-mannonate dehydratase compare
BPHYT_RS19610 -1.6 -0.9 general secretion pathway protein GspC compare
BPHYT_RS17240 -1.6 -0.5 cell division protein FtsW compare
BPHYT_RS03655 -1.6 -1.0 membrane protein compare
BPHYT_RS25780 -1.6 -0.5 DeoR faimly transcriptional regulator compare
BPHYT_RS25080 -1.6 -1.0 glycine/betaine ABC transporter substrate-binding protein compare
BPHYT_RS23385 -1.6 -1.0 group 1 glycosyl transferase compare
BPHYT_RS30885 -1.6 -2.5 hypothetical protein compare
BPHYT_RS10135 -1.5 -0.7 hypothetical protein compare
BPHYT_RS25135 -1.5 -1.3 hypothetical protein compare
BPHYT_RS18835 -1.5 -1.1 flagellar biosynthesis protein FliR compare
BPHYT_RS00160 -1.5 -2.7 ABC transporter substrate-binding protein compare
BPHYT_RS08150 -1.5 -0.7 membrane protein compare
BPHYT_RS34810 -1.5 -1.6 RND transporter compare
BPHYT_RS29175 -1.5 -1.8 ABC transporter ATP-binding protein compare
BPHYT_RS22300 -1.5 -1.2 hypothetical protein compare
BPHYT_RS22945 -1.5 -2.9 pilus assembly protein TadE compare
BPHYT_RS14060 -1.5 -1.2 peptidase M23 compare
BPHYT_RS07480 -1.5 -0.8 FAD-dependent oxidoreductase compare
BPHYT_RS07325 -1.5 -0.5 GntR family transcriptional regulator compare
BPHYT_RS32280 -1.5 -1.3 membrane protein compare
BPHYT_RS10475 -1.5 -1.2 mammalian cell entry protein compare
BPHYT_RS24655 -1.5 -1.2 amino acid ABC transporter substrate-binding protein compare
BPHYT_RS33580 -1.5 -3.6 geranyltranstransferase compare
BPHYT_RS29810 -1.5 -0.8 hexapeptide transferase compare
BPHYT_RS32880 -1.4 -0.9 alanine acetyltransferase compare
BPHYT_RS09980 -1.4 -0.8 TetR family transcriptional regulator compare
BPHYT_RS28945 -1.4 -1.7 endo-1,4-D-glucanase compare
BPHYT_RS30645 -1.4 -1.6 hypothetical protein compare
BPHYT_RS30140 -1.4 -0.6 3-methylitaconate isomerase compare
BPHYT_RS27410 -1.4 -1.3 amidohydrolase compare
BPHYT_RS12295 -1.4 -1.4 LysR family transcriptional regulator compare
BPHYT_RS34655 -1.4 -1.0 2-amino-3-ketobutyrate CoA ligase compare
BPHYT_RS27890 -1.4 -0.4 hypothetical protein compare
BPHYT_RS23770 -1.4 -1.1 GntR family transcriptional regulator compare
BPHYT_RS23895 -1.4 -1.4 hypothetical protein compare
BPHYT_RS02570 -1.4 -5.9 phosphocarrier protein HPr compare
BPHYT_RS14895 -1.4 -0.9 3-phosphoshikimate 1-carboxyvinyltransferase compare
BPHYT_RS28305 -1.4 -0.8 protein tyrosine phosphatase compare
BPHYT_RS01950 -1.4 -3.3 phosphoheptose isomerase compare
BPHYT_RS09870 -1.3 -1.4 membrane protein compare
BPHYT_RS20545 -1.3 -1.1 hypothetical protein compare
BPHYT_RS33135 -1.3 -1.4 LysR family transcriptional regulator compare
BPHYT_RS26775 -1.3 -0.8 chemotaxis protein CheB compare
BPHYT_RS31305 -1.3 -1.1 alcohol dehydrogenase compare
BPHYT_RS07335 -1.3 -2.4 nitrate ABC transporter permease compare
BPHYT_RS02285 -1.3 -3.8 cell division protein compare
BPHYT_RS07380 -1.3 -2.0 membrane protein compare
BPHYT_RS17520 -1.3 -2.7 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase compare
BPHYT_RS02180 -1.3 -1.2 hypothetical protein compare
BPHYT_RS02480 -1.3 -1.2 alkaline phosphatase compare
BPHYT_RS06470 -1.3 -0.6 membrane protein compare
BPHYT_RS22840 -1.3 -1.5 motility protein B compare
BPHYT_RS33690 -1.3 -1.4 molybdate ABC transporter permease compare
BPHYT_RS33045 -1.3 -0.8 response regulator receiver protein compare
BPHYT_RS08020 -1.3 -1.2 hypothetical protein compare
BPHYT_RS27430 -1.3 -0.8 LysR family transcriptional regulator compare
BPHYT_RS17890 -1.2 -1.0 shikimate kinase compare
BPHYT_RS27995 -1.2 -1.3 hypothetical protein compare
BPHYT_RS26680 -1.2 -1.4 oxidoreductase compare
BPHYT_RS07760 -1.2 -0.9 diguanylate phosphodiesterase compare
BPHYT_RS07415 -1.2 -2.3 hypothetical protein compare
BPHYT_RS04340 -1.2 -1.5 hypothetical protein compare
BPHYT_RS23075 -1.2 -1.7 GntR family transcriptional regulator compare
BPHYT_RS17620 -1.2 -6.2 cytochrome C compare
BPHYT_RS05515 -1.2 -1.8 hypothetical protein compare
BPHYT_RS33175 -1.2 -1.1 hypothetical protein compare
BPHYT_RS26925 -1.2 -1.0 NIPSNAP family containing protein compare
BPHYT_RS10750 -1.2 -0.5 LysR family transcriptional regulator compare
BPHYT_RS13450 -1.2 -0.9 GntR family transcriptional regulator compare
BPHYT_RS26080 -1.2 -0.5 ABC transporter ATPase compare
BPHYT_RS28270 -1.2 -2.0 ABC transporter substrate-binding protein compare
BPHYT_RS21335 -1.2 -0.8 CDP-alcohol phosphatidyltransferase compare
BPHYT_RS11960 -1.2 -0.5 MarR family transcriptional regulator compare
BPHYT_RS16195 -1.2 -2.1 carbon monoxide dehydrogenase subunit G compare
BPHYT_RS04335 -1.2 -0.6 membrane protein compare
BPHYT_RS27230 -1.2 -0.6 hypothetical protein compare
BPHYT_RS17630 -1.2 -4.6 ubiquinol-cytochrome C reductase compare
BPHYT_RS04325 -1.2 -3.2 acyltransferase 3 compare
BPHYT_RS13735 -1.2 -1.9 membrane protein compare
BPHYT_RS20880 -1.1 -0.8 polyketide cyclase compare
BPHYT_RS31900 -1.1 -0.8 short-chain dehydrogenase/reductase SDR compare
BPHYT_RS13130 -1.1 -0.8 metallophosphatase compare
BPHYT_RS31255 -1.1 -0.7 cytochrome B561 compare
BPHYT_RS00705 -1.1 -1.2 branched-chain amino acid ABC transporter substrate-binding protein compare
BPHYT_RS34745 -1.1 -0.7 hypothetical protein compare
BPHYT_RS24205 -1.1 -2.4 aldolase compare
BPHYT_RS35405 -1.1 -1.0 hypothetical protein compare
BPHYT_RS05455 -1.1 -1.1 AraC family transcriptional regulator compare
BPHYT_RS24500 -1.1 -0.7 histidine kinase compare
BPHYT_RS25515 -1.1 -0.9 glutathione S-transferase compare
BPHYT_RS31630 -1.1 -2.1 hypothetical protein compare
BPHYT_RS08600 -1.1 -1.0 hypothetical protein compare
BPHYT_RS15075 -1.1 -0.6 dihydrokaempferol 4-reductase compare
BPHYT_RS11900 -1.1 -1.5 LysR family transcriptional regulator compare
BPHYT_RS36360 -1.1 -1.1 hypothetical protein compare
BPHYT_RS17765 -1.1 -4.5 toluene ABC transporter ATP-binding protein compare
BPHYT_RS00940 -1.1 -1.5 transposase compare
BPHYT_RS29745 -1.1 -1.2 phosphonopyruvate decarboxylase compare
BPHYT_RS12925 -1.1 -0.5 exodeoxyribonuclease III compare
BPHYT_RS18610 -1.1 -2.8 lytic transglycosylase compare
BPHYT_RS30465 -1.1 -0.8 short-chain dehydrogenase compare
BPHYT_RS35105 -1.1 -1.6 succinylglutamate desuccinylase/aspartoacylase compare
BPHYT_RS25370 -1.1 -0.7 acyl-CoA dehydrogenase compare
BPHYT_RS13245 -1.0 -2.0 hypothetical protein compare
BPHYT_RS24760 -1.0 -1.2 cytochrome B561 compare
BPHYT_RS20900 -1.0 -1.5 phytanoyl-CoA dioxygenase compare
BPHYT_RS23020 -1.0 -2.2 alcohol dehydrogenase compare
BPHYT_RS07320 -1.0 -0.7 dihydrodipicolinate synthetase compare
BPHYT_RS23090 -1.0 -0.9 histidine kinase compare
BPHYT_RS01170 -1.0 -1.2 hypothetical protein compare
BPHYT_RS02985 -1.0 -1.2 MaoC family dehydratase compare
BPHYT_RS28955 -1.0 -0.8 hypothetical protein compare
BPHYT_RS33845 -1.0 -0.9 bacteriocin production protein compare
BPHYT_RS10100 -1.0 -1.9 dihydroxy-acid dehydratase compare
BPHYT_RS20570 -1.0 -1.4 heptosyltransferase compare
BPHYT_RS27495 -1.0 -0.5 hypothetical protein compare
BPHYT_RS26355 -1.0 -0.7 hypothetical protein compare
BPHYT_RS19545 -1.0 -1.9 nuclear protein SET compare
BPHYT_RS10175 -1.0 -0.8 membrane protein compare
BPHYT_RS03280 -1.0 -0.6 mannose-1-phosphate guanylyltransferase compare
BPHYT_RS00720 -1.0 -2.9 amidase compare
BPHYT_RS22885 -1.0 -1.6 hypothetical protein compare
BPHYT_RS11765 -1.0 -0.4 polyamine ABC transporter permease compare
BPHYT_RS21780 -1.0 -2.2 MFS transporter compare
BPHYT_RS09970 -1.0 -1.5 glutathione S-transferase compare


Specific Phenotypes

None in this experiment

For Burkholderia phytofirmans PsJN in phage experiments