Experiment set39S437 for Burkholderia phytofirmans PsJN

Compare to:

36hr PHYTO8 MOI 10

200 most detrimental genes:

  gene name fitness t score description  
BPHYT_RS11705 +3.7 2.7 hypothetical protein compare
BPHYT_RS14140 +3.2 6.0 phosphate transporter permease subunit PstC compare
BPHYT_RS09500 +2.8 18.1 glucose-6-phosphate isomerase compare
BPHYT_RS33820 +2.7 25.3 histidine kinase compare
BPHYT_RS04945 +2.7 23.6 membrane protein compare
BPHYT_RS18655 +2.7 7.4 3-oxoacyl-ACP synthase compare
BPHYT_RS04950 +2.7 22.5 hypothetical protein compare
BPHYT_RS12985 +2.7 2.8 amino acid acetyltransferase compare
BPHYT_RS06530 +2.4 2.7 membrane protein compare
BPHYT_RS25935 +2.4 2.1 type III secretion protein compare
BPHYT_RS19570 +2.4 20.6 sodium/hydrogen exchanger compare
BPHYT_RS14400 +2.4 6.8 anti-sigma factor compare
BPHYT_RS12845 +2.3 17.6 ATPase compare
BPHYT_RS19565 +2.3 16.3 gamma-glutamyl:cysteine ligase compare
BPHYT_RS06175 +2.3 4.6 LPS biosynthesis compare
BPHYT_RS06075 +2.3 9.0 hypothetical protein compare
BPHYT_RS09330 +2.3 18.9 phytoene synthase compare
BPHYT_RS05575 +2.3 17.1 Fis family transcriptional regulator compare
BPHYT_RS33920 +2.3 14.4 type II citrate synthase compare
BPHYT_RS05155 +2.2 8.7 acetyltransferase GCN5 compare
BPHYT_RS05590 +2.2 16.6 trehalose-6-phosphate synthase compare
BPHYT_RS23910 +2.2 4.5 phosphoribosyl-dephospho-CoA transferase compare
BPHYT_RS04940 +2.2 3.0 hypothetical protein compare
BPHYT_RS02595 +2.2 3.1 sulfurtransferase compare
BPHYT_RS05560 +2.1 10.3 Fis family transcriptional regulator compare
BPHYT_RS17095 +2.0 9.5 proline--tRNA ligase compare
BPHYT_RS27890 +2.0 1.1 hypothetical protein compare
BPHYT_RS14395 +1.9 10.1 sugar dehydratase compare
BPHYT_RS12840 +1.9 5.1 pyruvate dehydrogenase compare
BPHYT_RS34185 +1.9 5.1 cold-shock protein compare
BPHYT_RS14735 +1.9 2.1 hypothetical protein compare
BPHYT_RS06390 +1.9 3.6 ribosome-associated protein IOJAP compare
BPHYT_RS17100 +1.8 7.2 RNA pyrophosphohydrolase compare
BPHYT_RS12725 +1.8 15.0 regulator compare
BPHYT_RS25335 +1.8 1.2 hypothetical protein compare
BPHYT_RS26685 +1.8 1.7 precorrin-8X methylmutase compare
BPHYT_RS20790 +1.7 1.4 TetR family transcriptional regulator compare
BPHYT_RS09660 +1.7 11.3 trehalose-6-phosphate synthase compare
BPHYT_RS22835 +1.7 1.8 flagellar motor protein MotA compare
BPHYT_RS13645 +1.6 14.0 threonine--tRNA ligase compare
BPHYT_RS02905 +1.6 14.1 RNA polymerase subunit sigma-54 compare
BPHYT_RS17885 +1.6 4.1 3-dehydroquinate synthase compare
BPHYT_RS10320 +1.6 3.5 hypothetical protein compare
BPHYT_RS18600 +1.6 2.9 glutathione S-transferase compare
BPHYT_RS17035 +1.6 1.7 sugar kinase compare
BPHYT_RS08850 +1.6 0.7 transcriptional regulator compare
BPHYT_RS08415 +1.6 2.1 hypothetical protein compare
BPHYT_RS12510 +1.5 2.2 RNA-binding protein compare
BPHYT_RS14855 +1.5 0.6 ADP-L-glycero-D-manno-heptose-6-epimerase compare
BPHYT_RS28670 +1.5 2.3 MFS transporter compare
BPHYT_RS06985 +1.5 9.1 fumarate hydratase compare
BPHYT_RS09815 +1.5 2.9 malate synthase compare
BPHYT_RS08995 +1.5 1.3 hypothetical protein compare
BPHYT_RS02435 +1.5 1.8 hypothetical protein compare
BPHYT_RS12550 +1.5 0.9 GTP-binding protein HflX compare
BPHYT_RS09850 +1.5 2.9 molybdopterin oxidoreductase compare
BPHYT_RS25500 +1.4 1.6 hypothetical protein compare
BPHYT_RS05615 +1.4 1.3 hypothetical protein compare
BPHYT_RS12150 +1.4 9.5 PII uridylyl-transferase compare
BPHYT_RS24095 +1.4 4.2 membrane protein compare
BPHYT_RS04290 +1.4 0.7 glycosyl transferase family 2 compare
BPHYT_RS06320 +1.4 0.7 chemotaxis protein CheY compare
BPHYT_RS09640 +1.4 6.0 DNAase compare
BPHYT_RS09650 +1.4 1.4 hypothetical protein compare
BPHYT_RS14145 +1.4 7.0 phosphate ABC transporter substrate-binding protein compare
BPHYT_RS02865 +1.4 0.8 hypothetical protein compare
BPHYT_RS06195 +1.4 1.7 membrane protein compare
BPHYT_RS01435 +1.4 12.2 LysR family transcriptional regulator compare
BPHYT_RS05610 +1.4 9.3 DNA-cytosine methyltransferase compare
BPHYT_RS29410 +1.4 2.2 HPr kinase compare
BPHYT_RS30995 +1.4 0.6 glucose-1-phosphate thymidylyltransferase compare
BPHYT_RS30860 +1.4 2.3 sugar ABC transporter permease compare
BPHYT_RS05585 +1.4 5.4 hypothetical protein compare
BPHYT_RS04285 +1.4 0.6 rhamnosyltransferase compare
BPHYT_RS17445 +1.3 4.1 GTP-binding protein YchF compare
BPHYT_RS35735 +1.3 1.6 nitroreductase compare
BPHYT_RS02880 +1.3 1.2 ATP-dependent protease compare
BPHYT_RS23615 +1.3 2.1 XRE family transcriptional regulator compare
BPHYT_RS08945 +1.3 5.5 hypothetical protein compare
BPHYT_RS12635 +1.3 3.1 translation factor Sua5 compare
BPHYT_RS15190 +1.3 1.4 acyl carrier protein compare
BPHYT_RS03620 +1.3 6.2 poly(A) polymerase compare
BPHYT_RS26470 +1.3 1.0 MFS transporter compare
BPHYT_RS16345 +1.3 4.0 succinyl-CoA ligase [ADP-forming] subunit beta compare
BPHYT_RS01340 +1.3 1.7 ChrB domain-containing protein compare
BPHYT_RS30610 +1.3 2.3 major facilitator transporter compare
BPHYT_RS20845 +1.3 1.4 peroxidase compare
BPHYT_RS35165 +1.3 2.0 peptidase compare
BPHYT_RS05330 +1.3 2.8 phosphohydrolase compare
BPHYT_RS07255 +1.3 1.7 4-oxalocrotonate decarboxylase compare
BPHYT_RS30750 +1.3 1.3 GntR family transcriptional regulator compare
BPHYT_RS07515 +1.2 1.2 photosystem reaction center subunit H compare
BPHYT_RS10995 +1.2 1.9 GntR family transcriptional regulator compare
BPHYT_RS32960 +1.2 2.2 short-chain dehydrogenase compare
BPHYT_RS07690 +1.2 1.2 AraC family transcriptional regulator compare
BPHYT_RS28075 +1.2 1.5 cytochrome B561 compare
BPHYT_RS12615 +1.2 0.6 dihydrodipicolinate synthase compare
BPHYT_RS10040 +1.2 1.4 hypothetical protein compare
BPHYT_RS29905 +1.2 2.4 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase compare
BPHYT_RS07705 +1.2 1.6 arginine succinyltransferase compare
BPHYT_RS16175 +1.2 0.7 hemolysin D compare
BPHYT_RS18255 +1.2 1.6 phenylacetate-CoA oxygenase subunit PaaB compare
BPHYT_RS09160 +1.2 5.8 polyhydroxyalkanoate synthesis repressor PhaR compare
BPHYT_RS01620 +1.2 5.6 sensor histidine kinase compare
BPHYT_RS13765 +1.2 2.2 LysR family transcriptional regulator compare
BPHYT_RS07840 +1.2 1.2 muconate cycloisomerase compare
BPHYT_RS20095 +1.2 1.2 transcriptional regulator compare
BPHYT_RS33610 +1.2 1.3 DNA polymerase I compare
BPHYT_RS19735 +1.2 2.2 hypothetical protein compare
BPHYT_RS16270 +1.1 3.7 phosphoglycerate kinase compare
BPHYT_RS05025 +1.1 1.3 sugar ABC transporter substrate-binding protein compare
BPHYT_RS33360 +1.1 2.0 formyl-CoA transferase compare
BPHYT_RS35265 +1.1 3.3 LysR family transcriptional regulator compare
BPHYT_RS16335 +1.1 2.8 membrane protein compare
BPHYT_RS31615 +1.1 1.3 thiamine pyrophosphate protein compare
BPHYT_RS17165 +1.1 1.8 cell division protein ZapD compare
BPHYT_RS14895 +1.1 1.6 3-phosphoshikimate 1-carboxyvinyltransferase compare
BPHYT_RS29300 +1.1 1.7 endoribonuclease L-PSP compare
BPHYT_RS21495 +1.1 1.3 ABC transporter compare
BPHYT_RS23890 +1.1 1.7 MFS transporter compare
BPHYT_RS00980 +1.1 0.8 GCN5 family acetyltransferase compare
BPHYT_RS03400 +1.1 0.5 ATP-dependent DNA helicase RecG compare
BPHYT_RS31225 +1.1 1.8 D-alanyl-D-alanine dipeptidase compare
BPHYT_RS33215 +1.1 1.6 glycosyltransferase compare
BPHYT_RS25800 +1.1 1.1 sugar ABC transporter permease compare
BPHYT_RS10345 +1.1 1.2 flagellar motor protein MotB compare
BPHYT_RS03455 +1.1 2.7 paraquat-inducible protein A compare
BPHYT_RS24510 +1.1 2.8 alkylphosphonate utilization protein compare
BPHYT_RS01455 +1.1 1.1 peptide deformylase compare
BPHYT_RS14845 +1.1 0.7 cysteine synthase compare
BPHYT_RS05670 +1.1 1.9 hypothetical protein compare
BPHYT_RS26895 +1.1 2.9 nicotinate phosphoribosyltransferase compare
BPHYT_RS03580 +1.1 2.4 RNA-binding protein S4 compare
BPHYT_RS02600 +1.1 1.3 glutaredoxin compare
BPHYT_RS35310 +1.1 1.6 GCN5 family N-acetyltransferase compare
BPHYT_RS28040 +1.1 2.6 acyl-CoA dehydrogenase compare
BPHYT_RS08135 +1.1 1.1 hypothetical protein compare
BPHYT_RS02710 +1.1 1.4 hypothetical protein compare
BPHYT_RS14485 +1.1 4.3 ribonuclease E compare
BPHYT_RS21950 +1.1 0.9 RND transporter compare
BPHYT_RS03625 +1.1 6.1 Histidinol-phosphatase (EC:3.1.3.15) (from data) compare
BPHYT_RS23650 +1.1 0.7 hypothetical protein compare
BPHYT_RS25560 +1.0 1.6 RNA polymerase sigma factor compare
BPHYT_RS33125 +1.0 2.2 hypothetical protein compare
BPHYT_RS28505 +1.0 0.9 5-deoxyglucuronate isomerase compare
BPHYT_RS13200 +1.0 1.9 molybdopterin binding oxidoreductase compare
BPHYT_RS01960 +1.0 3.8 cytochrome C compare
BPHYT_RS19920 +1.0 1.3 peptidyl-prolyl cis-trans isomerase compare
BPHYT_RS04140 +1.0 3.7 polysaccharide biosynthesis protein compare
BPHYT_RS02640 +1.0 7.9 cytochrome C oxidase compare
BPHYT_RS27065 +1.0 1.4 hypothetical protein compare
BPHYT_RS28365 +1.0 1.2 Germin subfamily 1 member 15 compare
BPHYT_RS26975 +1.0 1.3 L-lactate dehydrogenase, LldE subunit (from data) compare
BPHYT_RS17640 +1.0 0.7 2-alkenal reductase compare
BPHYT_RS32280 +1.0 1.1 membrane protein compare
BPHYT_RS17490 +1.0 1.8 haloacid dehalogenase compare
BPHYT_RS15360 +1.0 1.8 hypothetical protein compare
BPHYT_RS26780 +1.0 6.3 chemotaxis protein CheR compare
BPHYT_RS25165 +1.0 1.2 HTH-type transcriptional regulator BetI compare
BPHYT_RS15865 +1.0 1.5 exodeoxyribonuclease VII large subunit compare
BPHYT_RS14340 +1.0 5.7 Fis family transcriptional regulator compare
BPHYT_RS09780 +1.0 2.9 polysaccharide biosynthesis protein compare
BPHYT_RS16060 +1.0 2.6 ribonucleotide-diphosphate reductase subunit alpha compare
BPHYT_RS26910 +1.0 2.3 hypothetical protein compare
BPHYT_RS17860 +1.0 1.7 transposase compare
BPHYT_RS34485 +1.0 1.8 diguanylate phosphodiesterase compare
BPHYT_RS33515 +1.0 6.2 porin compare
BPHYT_RS16710 +1.0 0.4 LysR family transcriptional regulator compare
BPHYT_RS27865 +1.0 1.6 ATPase compare
BPHYT_RS16390 +1.0 2.9 MarR family transcriptional regulator compare
BPHYT_RS25395 +1.0 1.5 3-oxoacyl-ACP reductase compare
BPHYT_RS16840 +1.0 1.7 transketolase compare
BPHYT_RS24270 +1.0 1.2 C4-dicarboxylate ABC transporter substrate-binding protein compare
BPHYT_RS01315 +1.0 1.9 cupin compare
BPHYT_RS33175 +1.0 0.9 hypothetical protein compare
BPHYT_RS26570 +1.0 0.9 5'-nucleotidase compare
BPHYT_RS14135 +1.0 6.6 phosphate transporter permease subunit PtsA compare
BPHYT_RS34280 +1.0 1.6 hypothetical protein compare
BPHYT_RS04430 +1.0 1.0 amino acid ABC transporter ATPase compare
BPHYT_RS11555 +1.0 1.5 allantoinase compare
BPHYT_RS05190 +1.0 2.8 ADP-heptose--LPS heptosyltransferase compare
BPHYT_RS08455 +1.0 5.3 ribonuclease R compare
BPHYT_RS26930 +1.0 2.8 mechanosensitive ion channel protein compare
BPHYT_RS28190 +1.0 2.2 porin compare
BPHYT_RS21585 +1.0 2.0 short-chain dehydrogenase compare
BPHYT_RS17590 +1.0 1.5 hypothetical protein compare
BPHYT_RS08125 +0.9 5.3 ATPase compare
BPHYT_RS16590 +0.9 3.2 Fis family transcriptional regulator compare
BPHYT_RS02530 +0.9 3.5 hypothetical protein compare
BPHYT_RS15325 +0.9 3.8 ribonuclease PH compare
BPHYT_RS33070 +0.9 2.1 haloacid dehalogenase compare
BPHYT_RS03725 +0.9 0.4 serine hydroxymethyltransferase compare
BPHYT_RS18965 +0.9 1.9 chemotaxis protein CheY compare
BPHYT_RS12830 +0.9 3.6 dihydrolipoamide dehydrogenase compare
BPHYT_RS31495 +0.9 1.9 transposase compare
BPHYT_RS04300 +0.9 5.5 family 2 glycosyl transferase compare
BPHYT_RS05300 +0.9 2.8 polyketide cyclase compare
BPHYT_RS04315 +0.9 3.3 UDP-N-acetylglucosamine 2-epimerase compare
BPHYT_RS18910 +0.9 1.1 FlgN compare
BPHYT_RS02650 +0.9 2.1 membrane protein compare


Specific Phenotypes

For 2 genes in this experiment