Experiment set39S436 for Burkholderia phytofirmans PsJN

Compare to:

36hr PHYTO8 MOI 10

200 most detrimental genes:

  gene name fitness t score description  
BPHYT_RS11705 +3.2 2.6 hypothetical protein compare
BPHYT_RS14140 +3.2 6.1 phosphate transporter permease subunit PstC compare
BPHYT_RS06530 +2.9 3.0 membrane protein compare
BPHYT_RS18655 +2.6 11.5 3-oxoacyl-ACP synthase compare
BPHYT_RS33820 +2.6 24.3 histidine kinase compare
BPHYT_RS04945 +2.6 22.4 membrane protein compare
BPHYT_RS25935 +2.5 2.2 type III secretion protein compare
BPHYT_RS04950 +2.4 19.1 hypothetical protein compare
BPHYT_RS12845 +2.4 17.7 ATPase compare
BPHYT_RS09500 +2.3 9.4 glucose-6-phosphate isomerase compare
BPHYT_RS19570 +2.3 19.0 sodium/hydrogen exchanger compare
BPHYT_RS33920 +2.3 17.4 type II citrate synthase compare
BPHYT_RS13605 +2.2 2.4 tRNA-Pro compare
BPHYT_RS05575 +2.2 18.1 Fis family transcriptional regulator compare
BPHYT_RS04940 +2.2 3.3 hypothetical protein compare
BPHYT_RS19565 +2.2 14.8 gamma-glutamyl:cysteine ligase compare
BPHYT_RS09330 +2.2 17.6 phytoene synthase compare
BPHYT_RS12550 +2.1 1.5 GTP-binding protein HflX compare
BPHYT_RS21860 +2.1 3.1 hypothetical protein compare
BPHYT_RS07255 +2.1 5.5 4-oxalocrotonate decarboxylase compare
BPHYT_RS30450 +2.1 1.8 ABC transporter permease compare
BPHYT_RS17490 +2.1 2.9 haloacid dehalogenase compare
BPHYT_RS17095 +2.1 9.6 proline--tRNA ligase compare
BPHYT_RS06390 +2.0 4.9 ribosome-associated protein IOJAP compare
BPHYT_RS02595 +2.0 2.9 sulfurtransferase compare
BPHYT_RS05155 +2.0 8.6 acetyltransferase GCN5 compare
BPHYT_RS14400 +2.0 4.1 anti-sigma factor compare
BPHYT_RS14550 +1.9 1.8 tRNA-Asn compare
BPHYT_RS05560 +1.9 8.6 Fis family transcriptional regulator compare
BPHYT_RS05590 +1.9 13.8 trehalose-6-phosphate synthase compare
BPHYT_RS06075 +1.9 7.5 hypothetical protein compare
BPHYT_RS30995 +1.9 0.9 glucose-1-phosphate thymidylyltransferase compare
BPHYT_RS06195 +1.9 2.5 membrane protein compare
BPHYT_RS07840 +1.8 2.6 muconate cycloisomerase compare
BPHYT_RS04370 +1.8 0.6 glycosyl transferase compare
BPHYT_RS20665 +1.8 1.2 LysR family transcriptional regulator compare
BPHYT_RS12725 +1.8 13.8 regulator compare
BPHYT_RS06985 +1.8 7.8 fumarate hydratase compare
BPHYT_RS23910 +1.8 4.2 phosphoribosyl-dephospho-CoA transferase compare
BPHYT_RS04290 +1.7 1.1 glycosyl transferase family 2 compare
BPHYT_RS24095 +1.7 5.1 membrane protein compare
BPHYT_RS14395 +1.7 6.2 sugar dehydratase compare
BPHYT_RS29485 +1.7 2.5 phosphonate ABC transporter ATP-binding protein compare
BPHYT_RS09465 +1.7 1.8 transcriptional regulator compare
BPHYT_RS13645 +1.7 14.8 threonine--tRNA ligase compare
BPHYT_RS09660 +1.7 12.1 trehalose-6-phosphate synthase compare
BPHYT_RS26975 +1.6 2.5 L-lactate dehydrogenase, LldE subunit (from data) compare
BPHYT_RS30610 +1.6 2.6 major facilitator transporter compare
BPHYT_RS05615 +1.6 1.8 hypothetical protein compare
BPHYT_RS14245 +1.6 1.5 membrane protein compare
BPHYT_RS12465 +1.6 2.5 inositol monophosphatase compare
BPHYT_RS02905 +1.6 13.3 RNA polymerase subunit sigma-54 compare
BPHYT_RS18600 +1.5 2.7 glutathione S-transferase compare
BPHYT_RS31615 +1.5 2.0 thiamine pyrophosphate protein compare
BPHYT_RS06175 +1.5 4.0 LPS biosynthesis compare
BPHYT_RS16345 +1.5 4.9 succinyl-CoA ligase [ADP-forming] subunit beta compare
BPHYT_RS21475 +1.5 2.0 hypothetical protein compare
BPHYT_RS07960 +1.5 1.4 hypothetical protein compare
BPHYT_RS08850 +1.5 0.6 transcriptional regulator compare
BPHYT_RS14145 +1.5 7.3 phosphate ABC transporter substrate-binding protein compare
BPHYT_RS28670 +1.5 2.2 MFS transporter compare
BPHYT_RS14855 +1.5 0.6 ADP-L-glycero-D-manno-heptose-6-epimerase compare
BPHYT_RS29800 +1.4 2.1 hypothetical protein compare
BPHYT_RS17890 +1.4 1.8 shikimate kinase compare
BPHYT_RS34185 +1.4 5.5 cold-shock protein compare
BPHYT_RS13470 +1.4 1.0 arylsulfate sulfotransferase compare
BPHYT_RS05610 +1.4 8.2 DNA-cytosine methyltransferase compare
BPHYT_RS30395 +1.4 1.3 small mechanosensitive ion channel protein MscS compare
BPHYT_RS28575 +1.4 1.3 transcriptional regulator compare
BPHYT_RS01435 +1.4 11.9 LysR family transcriptional regulator compare
BPHYT_RS00920 +1.4 3.3 transposase compare
BPHYT_RS05670 +1.4 2.6 hypothetical protein compare
BPHYT_RS31515 +1.4 2.3 agmatinase compare
BPHYT_RS03620 +1.4 7.2 poly(A) polymerase compare
BPHYT_RS07860 +1.4 1.0 benzoate 1,2-dioxygenase subunit beta compare
BPHYT_RS05905 +1.4 0.9 hypothetical protein compare
BPHYT_RS17035 +1.4 1.4 sugar kinase compare
BPHYT_RS09850 +1.3 2.3 molybdopterin oxidoreductase compare
BPHYT_RS02865 +1.3 0.8 hypothetical protein compare
BPHYT_RS17100 +1.3 4.9 RNA pyrophosphohydrolase compare
BPHYT_RS32415 +1.3 4.8 translation elongation factor compare
BPHYT_RS03480 +1.3 4.1 ferritin compare
BPHYT_RS35770 +1.3 1.2 glyoxalase compare
BPHYT_RS09565 +1.3 1.0 acetyl-CoA acetyltransferase compare
BPHYT_RS28965 +1.3 2.2 hypothetical protein compare
BPHYT_RS02435 +1.3 2.0 hypothetical protein compare
BPHYT_RS02010 +1.3 2.7 copper homeostasis protein CutC compare
BPHYT_RS03830 +1.3 2.8 hypothetical protein compare
BPHYT_RS35215 +1.3 1.8 dehydrogenase compare
BPHYT_RS26955 +1.3 1.7 succinylglutamate desuccinylase compare
BPHYT_RS01455 +1.3 1.3 peptide deformylase compare
BPHYT_RS04285 +1.3 0.6 rhamnosyltransferase compare
BPHYT_RS12840 +1.3 2.3 pyruvate dehydrogenase compare
BPHYT_RS12985 +1.3 1.1 amino acid acetyltransferase compare
BPHYT_RS33215 +1.3 2.5 glycosyltransferase compare
BPHYT_RS15620 +1.3 2.6 peptidyl-prolyl cis-trans isomerase compare
BPHYT_RS07705 +1.3 2.5 arginine succinyltransferase compare
BPHYT_RS09640 +1.3 5.4 DNAase compare
BPHYT_RS25560 +1.2 2.4 RNA polymerase sigma factor compare
BPHYT_RS19325 +1.2 2.2 glycine cleavage system H protein compare
BPHYT_RS10320 +1.2 4.2 hypothetical protein compare
BPHYT_RS32225 +1.2 1.2 hypothetical protein compare
BPHYT_RS23880 +1.2 1.2 sugar ABC transporter permease compare
BPHYT_RS35750 +1.2 1.3 hypothetical protein compare
BPHYT_RS12150 +1.2 8.6 PII uridylyl-transferase compare
BPHYT_RS26770 +1.2 1.6 histidine kinase compare
BPHYT_RS05585 +1.2 4.6 hypothetical protein compare
BPHYT_RS03505 +1.2 1.8 FAD-binding protein compare
BPHYT_RS35100 +1.2 1.6 ABC transporter substrate-binding protein compare
BPHYT_RS15290 +1.2 3.2 tRNA-Arg compare
BPHYT_RS23600 +1.2 1.2 hypothetical protein compare
BPHYT_RS27030 +1.2 1.0 transcriptional regulator compare
BPHYT_RS09160 +1.2 5.2 polyhydroxyalkanoate synthesis repressor PhaR compare
BPHYT_RS16065 +1.2 0.8 LacI family transcriptional regulator compare
BPHYT_RS05320 +1.2 1.6 beta-lactamase compare
BPHYT_RS13505 +1.2 3.0 2,4-dienoyl-CoA reductase compare
BPHYT_RS16020 +1.2 2.9 AsnC family transcriptional regulator compare
BPHYT_RS03625 +1.1 5.3 Histidinol-phosphatase (EC:3.1.3.15) (from data) compare
BPHYT_RS12280 +1.1 1.3 RNA helicase compare
BPHYT_RS27890 +1.1 0.5 hypothetical protein compare
BPHYT_RS16175 +1.1 0.7 hemolysin D compare
BPHYT_RS10435 +1.1 1.7 ThiJ/PfpI domain-containing protein compare
BPHYT_RS28535 +1.1 1.1 response regulator receiver compare
BPHYT_RS13080 +1.1 1.5 hypothetical protein compare
BPHYT_RS21910 +1.1 1.8 ABC transporter permease compare
BPHYT_RS16335 +1.1 2.7 membrane protein compare
BPHYT_RS19985 +1.1 1.0 CoA-transferase compare
BPHYT_RS11795 +1.1 0.9 membrane protein compare
BPHYT_RS06375 +1.1 2.6 ribonuclease compare
BPHYT_RS05895 +1.1 1.3 hypothetical protein compare
BPHYT_RS15325 +1.1 3.5 ribonuclease PH compare
BPHYT_RS07325 +1.1 0.5 GntR family transcriptional regulator compare
BPHYT_RS26930 +1.1 5.3 mechanosensitive ion channel protein compare
BPHYT_RS20830 +1.1 2.0 electron transfer flavoprotein subunit beta compare
BPHYT_RS02230 +1.1 2.7 acetyl-CoA acetyltransferase compare
BPHYT_RS05025 +1.1 1.2 sugar ABC transporter substrate-binding protein compare
BPHYT_RS32495 +1.1 2.2 ABC transporter compare
BPHYT_RS25340 +1.1 2.0 sulfatase compare
BPHYT_RS26560 +1.1 1.6 murein hydrolase transporter LrgA compare
BPHYT_RS33175 +1.1 1.5 hypothetical protein compare
BPHYT_RS11555 +1.1 1.7 allantoinase compare
BPHYT_RS28520 +1.1 2.3 hypothetical protein compare
BPHYT_RS05705 +1.1 1.1 hypothetical protein compare
BPHYT_RS10065 +1.1 0.7 cytochrome C oxidase subunit I compare
BPHYT_RS08510 +1.1 1.9 acyl-CoA dehydrogenase compare
BPHYT_RS01505 +1.1 2.4 7-cyano-7-deazaguanine reductase compare
BPHYT_RS28440 +1.1 1.7 heat shock Hsp20 compare
BPHYT_RS31545 +1.1 1.9 membrane protein compare
BPHYT_RS25075 +1.1 1.6 AraC family transcriptional regulator compare
BPHYT_RS35220 +1.1 2.8 extradiol dioxygenase compare
BPHYT_RS11815 +1.1 1.5 alcohol dehydrogenase compare
BPHYT_RS26780 +1.1 2.6 chemotaxis protein CheR compare
BPHYT_RS09815 +1.1 1.2 malate synthase compare
BPHYT_RS03090 +1.0 1.8 hypothetical protein compare
BPHYT_RS10215 +1.0 0.8 sulfate transporter compare
BPHYT_RS08945 +1.0 5.2 hypothetical protein compare
BPHYT_RS08080 +1.0 7.2 tRNA pseudouridine synthase B compare
BPHYT_RS29475 +1.0 1.5 carbon-phosphorus lyase complex subunit PhnJ compare
BPHYT_RS00295 +1.0 1.5 hypothetical protein compare
BPHYT_RS21850 +1.0 2.2 pyrimidine reductase compare
BPHYT_RS34080 +1.0 1.4 flagellar motor protein MotB compare
BPHYT_RS05245 +1.0 4.1 hypothetical protein compare
BPHYT_RS17240 +1.0 0.5 cell division protein FtsW compare
BPHYT_RS24270 +1.0 1.7 C4-dicarboxylate ABC transporter substrate-binding protein compare
BPHYT_RS05010 +1.0 2.4 RpiR family transcriptional regulator compare
BPHYT_RS02525 +1.0 5.2 membrane protein compare
BPHYT_RS14845 +1.0 0.6 cysteine synthase compare
BPHYT_RS12635 +1.0 2.4 translation factor Sua5 compare
BPHYT_RS34745 +1.0 1.1 hypothetical protein compare
BPHYT_RS07425 +1.0 2.7 hypothetical protein compare
BPHYT_RS13885 +1.0 1.5 myo-inositol 2-dehydrogenase compare
BPHYT_RS32845 +1.0 2.1 ABC transporter substrate-binding protein compare
BPHYT_RS05255 +1.0 1.7 phage abortive infection protein compare
BPHYT_RS31225 +1.0 1.3 D-alanyl-D-alanine dipeptidase compare
BPHYT_RS14340 +1.0 5.8 Fis family transcriptional regulator compare
BPHYT_RS05420 +1.0 1.6 glutathione S-transferase compare
BPHYT_RS25815 +1.0 1.3 deoxyribose-phosphate aldolase compare
BPHYT_RS28410 +1.0 1.6 ubiquinol oxidase subunit II, cyanide insensitive compare
BPHYT_RS31385 +1.0 1.5 ketoacyl reductase compare
BPHYT_RS23460 +1.0 0.6 AraC family transcriptional regulator compare
BPHYT_RS34485 +1.0 1.9 diguanylate phosphodiesterase compare
BPHYT_RS27830 +1.0 2.8 universal stress protein A compare
BPHYT_RS02530 +1.0 4.4 hypothetical protein compare
BPHYT_RS17885 +1.0 2.1 3-dehydroquinate synthase compare
BPHYT_RS24010 +1.0 1.3 L-histidine ABC transporter, permease component 2 (from data) compare
BPHYT_RS16710 +1.0 0.3 LysR family transcriptional regulator compare
BPHYT_RS04820 +1.0 2.1 LysR family transcriptional regulator compare
BPHYT_RS33170 +1.0 1.6 acetyltransferase compare
BPHYT_RS17545 +1.0 3.6 cold-shock protein compare
BPHYT_RS21445 +1.0 1.7 sugar ABC transporter ATP-binding protein compare
BPHYT_RS27195 +0.9 2.0 LacI family transcriptional regulator compare
BPHYT_RS26135 +0.9 0.7 ABC transporter permease compare
BPHYT_RS25210 +0.9 1.0 drug:proton antiporter compare
BPHYT_RS02640 +0.9 6.5 cytochrome C oxidase compare
BPHYT_RS03450 +0.9 3.9 paraquat-inducible protein A compare
BPHYT_RS28505 +0.9 1.0 5-deoxyglucuronate isomerase compare
BPHYT_RS14485 +0.9 3.2 ribonuclease E compare
BPHYT_RS30645 +0.9 1.7 hypothetical protein compare
BPHYT_RS02725 +0.9 2.3 GntR family transcriptional regulator compare
BPHYT_RS03455 +0.9 1.1 paraquat-inducible protein A compare


Specific Phenotypes

None in this experiment

For Burkholderia phytofirmans PsJN in phage experiments