Experiment set39S435 for Burkholderia phytofirmans PsJN

200 most important genes:

gene	name	fitness	t score	description
BPHYT_RS26385		-4.6	-1.5	glutamine amidotransferase
BPHYT_RS03410		-4.3	-2.4	queuine tRNA-ribosyltransferase
BPHYT_RS03015		-4.2	-1.4	aldolase
BPHYT_RS07320		-4.0	-1.3	dihydrodipicolinate synthetase
BPHYT_RS26470		-3.1	-1.0	MFS transporter
BPHYT_RS29695		-3.0	-1.4	hypothetical protein
BPHYT_RS21460		-2.9	-1.3	UDP-N-acetylglucosamine 2-epimerase
BPHYT_RS09280		-2.8	-0.9	pyridoxal-5'-phosphate-dependent protein subunit beta
BPHYT_RS31050		-2.8	-0.9	epimerase
BPHYT_RS30450		-2.8	-0.9	ABC transporter permease
BPHYT_RS12925		-2.7	-0.9	exodeoxyribonuclease III
BPHYT_RS04350		-2.7	-10.0	membrane protein
BPHYT_RS30610		-2.7	-2.4	major facilitator transporter
BPHYT_RS11765		-2.7	-0.9	polyamine ABC transporter permease
BPHYT_RS24315		-2.5	-1.4	phosphoribosyltransferase
BPHYT_RS04365		-2.5	-11.5	membrane protein
BPHYT_RS02765		-2.4	-1.4	cytochrome BD oxidase subunit I
BPHYT_RS11635		-2.4	-0.8	RNA polymerase subunit sigma-24
BPHYT_RS03655		-2.4	-1.1	membrane protein
BPHYT_RS30415		-2.4	-1.9	AraC family transcriptional regulator
BPHYT_RS20235		-2.3	-4.9	iron ABC transporter
BPHYT_RS07480		-2.3	-1.1	FAD-dependent oxidoreductase
BPHYT_RS16555		-2.3	-3.5	cation transporter
BPHYT_RS08235		-2.3	-0.7	nucleoprotein, Hfg, host factor I
BPHYT_RS11265		-2.2	-1.3	hypothetical protein
BPHYT_RS36525		-2.2	-1.4	hypothetical protein
BPHYT_RS04095		-2.1	-1.0	SAM-dependent methyltransferase PhcB
BPHYT_RS01485		-2.1	-1.2	histidine kinase
BPHYT_RS03280		-2.1	-1.0	mannose-1-phosphate guanylyltransferase
BPHYT_RS26025		-2.1	-0.7	hypothetical protein
BPHYT_RS36435		-2.1	-1.6	hypothetical protein
BPHYT_RS22910		-2.1	-0.7	hypothetical protein
BPHYT_RS16180		-2.1	-0.7	TetR family transcriptional regulator
BPHYT_RS04340		-2.0	-1.4	hypothetical protein
BPHYT_RS27410		-2.0	-1.4	amidohydrolase
BPHYT_RS11310		-2.0	-1.3	LysR family transcriptional regulator
BPHYT_RS11745		-2.0	-0.9	(2Fe-2S)-binding protein
BPHYT_RS10065		-1.9	-1.1	cytochrome C oxidase subunit I
BPHYT_RS28245		-1.9	-1.4	MFS transporter
BPHYT_RS30775		-1.9	-1.5	gluconate 2-dehydrogenase
BPHYT_RS30505		-1.9	-1.4	ABC transporter permease
BPHYT_RS04330		-1.9	-5.4	hypothetical protein
BPHYT_RS04595		-1.8	-1.5	cytoplasmic protein
BPHYT_RS20105		-1.8	-2.6	nitrate ABC transporter substrate-binding protein
BPHYT_RS26880		-1.8	-1.5	ketosteroid isomerase
BPHYT_RS10270		-1.8	-2.3	D-amino acid dehydrogenase
BPHYT_RS05290		-1.7	-0.8	hypothetical protein
BPHYT_RS25780		-1.7	-0.6	DeoR faimly transcriptional regulator
BPHYT_RS25710		-1.7	-1.4	hypothetical protein
BPHYT_RS22930		-1.7	-0.8	type II secretion system protein
BPHYT_RS08410		-1.7	-0.8	dehydrogenase
BPHYT_RS09205		-1.7	-2.1	cytochrome P450
BPHYT_RS11680		-1.7	-1.1	protein-L-isoaspartate O-methyltransferase
BPHYT_RS22815		-1.6	-1.4	TonB-denpendent receptor
BPHYT_RS09525		-1.6	-2.2	toxin HipA
BPHYT_RS21940		-1.6	-1.7	hemolysin D
BPHYT_RS00940		-1.6	-2.6	transposase
BPHYT_RS14060		-1.6	-1.2	peptidase M23
BPHYT_RS02180		-1.6	-1.4	hypothetical protein
BPHYT_RS32055		-1.6	-1.7	hypothetical protein
BPHYT_RS07325		-1.6	-0.5	GntR family transcriptional regulator
BPHYT_RS02755		-1.6	-1.2	cyd operon protein YbgT
BPHYT_RS28110		-1.6	-1.2	hypothetical protein
BPHYT_RS09980		-1.5	-0.9	TetR family transcriptional regulator
BPHYT_RS26010		-1.5	-2.0	ABC transporter substrate-binding protein
BPHYT_RS06990		-1.5	-0.7	membrane protein
BPHYT_RS09895		-1.5	-1.0	LysR family transcriptional regulator
BPHYT_RS28685		-1.5	-1.6	GntR family transcriptional regulator
BPHYT_RS09655		-1.5	-3.4	mechanosensitive ion channel protein MscS
BPHYT_RS26775		-1.5	-0.9	chemotaxis protein CheB
BPHYT_RS14920		-1.5	-1.6	hypothetical protein
BPHYT_RS08130		-1.5	-1.1	transposase
BPHYT_RS03645		-1.5	-1.7	tRNA dimethylallyltransferase
BPHYT_RS28705		-1.5	-1.1	IclR family transcriptional regulator
BPHYT_RS36385		-1.5	-0.7	TetR family transcriptional regulator
BPHYT_RS25830		-1.5	-1.6	sugar ABC transporter substrate-binding protein
BPHYT_RS13835		-1.4	-1.2	S-adenosylhomocysteine nucleosidase
BPHYT_RS12280		-1.4	-0.9	RNA helicase
BPHYT_RS11400		-1.4	-1.6	hypothetical protein
BPHYT_RS06685		-1.4	-2.6	NADH:ubiquinone oxidoreductase subunit M
BPHYT_RS31495		-1.4	-1.8	transposase
BPHYT_RS01625		-1.4	-1.7	chemotaxis protein CheY
BPHYT_RS36355		-1.4	-1.0	hypothetical protein
BPHYT_RS22940		-1.4	-1.1	pilus assembly protein TadE
BPHYT_RS03945		-1.4	-1.7	hypothetical protein
BPHYT_RS29540		-1.4	-0.8	aldolase
BPHYT_RS24655		-1.4	-1.2	amino acid ABC transporter substrate-binding protein
BPHYT_RS19335		-1.4	-0.9	hypothetical protein
BPHYT_RS27295		-1.4	-1.2	hypothetical protein
BPHYT_RS28830		-1.4	-0.6	LysR family transcriptional regulator
BPHYT_RS33965		-1.4	-1.8	methylcitrate synthase
BPHYT_RS27455		-1.3	-0.9	rod shape-determining protein MreB
BPHYT_RS09105		-1.3	-3.6	protein-L-isoaspartate O-methyltransferase
BPHYT_RS12510		-1.3	-0.9	RNA-binding protein
BPHYT_RS06710		-1.3	-0.7	hypothetical protein
BPHYT_RS16475		-1.3	-2.2	hypothetical protein
BPHYT_RS29485		-1.3	-1.3	phosphonate ABC transporter ATP-binding protein
BPHYT_RS31830		-1.3	-1.7	hypothetical protein
BPHYT_RS04965		-1.3	-3.9	ATP-binding protein
BPHYT_RS34780		-1.3	-2.3	phytoene synthase
BPHYT_RS05565		-1.3	-1.3	membrane protein
BPHYT_RS10240		-1.3	-0.7	translation initiation inhibitor
BPHYT_RS10470		-1.3	-1.5	hypothetical protein
BPHYT_RS23210		-1.3	-1.8	MFS transporter
BPHYT_RS24125		-1.3	-2.5	endopolygalacturonase
BPHYT_RS11960		-1.3	-0.6	MarR family transcriptional regulator
BPHYT_RS30065		-1.3	-1.4	shikimate dehydrogenase
BPHYT_RS10940		-1.3	-2.6	4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase
BPHYT_RS16255		-1.3	-2.2	phosphoribosylaminoimidazole-succinocarboxamide synthase
BPHYT_RS33460		-1.3	-0.7	protocatechuate 3,4-dioxygenase subunit alpha
BPHYT_RS18610		-1.3	-3.6	lytic transglycosylase
BPHYT_RS19945		-1.3	-2.0	hypothetical protein
BPHYT_RS33375		-1.3	-1.4	membrane protein
BPHYT_RS04955		-1.3	-1.8	methionyl-tRNA synthetase
BPHYT_RS02570		-1.3	-2.9	phosphocarrier protein HPr
BPHYT_RS18630		-1.3	-1.6	allophanate hydrolase
BPHYT_RS31415		-1.2	-1.0	amino acid ABC transporter permease
BPHYT_RS06325		-1.2	-2.2	ATPase
BPHYT_RS04335		-1.2	-0.7	membrane protein
BPHYT_RS10720		-1.2	-1.0	hypothetical protein
BPHYT_RS10985		-1.2	-2.4	MFS transporter
BPHYT_RS25800		-1.2	-1.0	sugar ABC transporter permease
BPHYT_RS21615		-1.2	-1.4	FMN-dependent NADH-azoreductase
BPHYT_RS07095		-1.2	-1.1	LysR family transcriptional regulator
BPHYT_RS07050		-1.2	-0.8	membrane protein
BPHYT_RS03375		-1.2	-1.0	NAD(P) transhydrogenase
BPHYT_RS22840		-1.2	-1.6	motility protein B
BPHYT_RS26035		-1.2	-2.1	ABC transporter ATP-binding protein
BPHYT_RS29745		-1.2	-1.1	phosphonopyruvate decarboxylase
BPHYT_RS00965		-1.2	-1.7	ArsR family transcriptional regulator
BPHYT_RS21295		-1.2	-3.4	AraC family transcriptional regulator
BPHYT_RS15090		-1.2	-3.1	xanthine dehydrogenase accessory protein XdhC
BPHYT_RS32290		-1.2	-1.7	hypothetical protein
BPHYT_RS12380		-1.2	-2.1	ABC transporter permease
BPHYT_RS01095		-1.2	-0.9	hypothetical protein
BPHYT_RS31840		-1.2	-1.4	anhydrase
BPHYT_RS35205		-1.2	-1.1	hypothetical protein
BPHYT_RS25870		-1.2	-0.5	type III secretion system ATPase
BPHYT_RS27495		-1.2	-0.5	hypothetical protein
BPHYT_RS26855		-1.2	-1.1	carboxyvinyl-carboxyphosphonate phosphorylmutase
BPHYT_RS11155		-1.2	-0.8	hypothetical protein
BPHYT_RS10540		-1.2	-0.7	secretion protein
BPHYT_RS26465		-1.2	-0.7	metallophosphoesterase
BPHYT_RS02415		-1.2	-2.7	cytochrome C550
BPHYT_RS20725		-1.1	-1.0	histidine kinase
BPHYT_RS17765		-1.1	-4.4	toluene ABC transporter ATP-binding protein
BPHYT_RS18340		-1.1	-0.7	n-acetyl-gamma-glutamyl-phosphate reductase
BPHYT_RS26355		-1.1	-0.8	hypothetical protein
BPHYT_RS15075		-1.1	-0.6	dihydrokaempferol 4-reductase
BPHYT_RS28600		-1.1	-0.9	ArsC family transcriptional regulator
BPHYT_RS32210		-1.1	-0.8	hypothetical protein
BPHYT_RS00115		-1.1	-1.7	acetaldehyde dehydrogenase
BPHYT_RS35435		-1.1	-2.0	glutathione S-transferase
BPHYT_RS33030		-1.1	-0.8	hypothetical protein
BPHYT_RS23520		-1.1	-1.0	peroxidase
BPHYT_RS18835		-1.1	-0.9	flagellar biosynthesis protein FliR
BPHYT_RS14210		-1.1	-2.2	hydroxyacylglutathione hydrolase
BPHYT_RS07165		-1.1	-1.0	peptide ABC transporter permease
BPHYT_RS33075		-1.1	-1.9	sulfatase maturase
BPHYT_RS11795		-1.1	-0.6	membrane protein
BPHYT_RS25210		-1.1	-0.8	drug:proton antiporter
BPHYT_RS13605		-1.1	-0.6	tRNA-Pro
BPHYT_RS10205		-1.1	-1.9	D-lactate dehydrogenase
BPHYT_RS11125		-1.1	-0.7	alkylhydroperoxidase
BPHYT_RS29810		-1.1	-0.7	hexapeptide transferase
BPHYT_RS35315		-1.1	-1.3	threonyl-tRNA synthetase
BPHYT_RS28325		-1.1	-1.6	NADPH-dependent FMN reductase
BPHYT_RS13585		-1.1	-1.7	amino acid ABC transporter permease
BPHYT_RS33655		-1.1	-1.8	MarR family transcriptional regulator
BPHYT_RS28910		-1.1	-1.2	diguanylate phosphodiesterase
BPHYT_RS32525		-1.1	-1.1	hypothetical protein
BPHYT_RS06320		-1.1	-0.7	chemotaxis protein CheY
BPHYT_RS33450		-1.1	-1.2	LysR family transcriptional regulator
BPHYT_RS29320		-1.1	-0.5	histidine kinase
BPHYT_RS18590		-1.1	-0.5	hypothetical protein
BPHYT_RS29450		-1.1	-0.8	phosphonate metabolism protein
BPHYT_RS26305		-1.1	-1.4	exonuclease
BPHYT_RS13055		-1.0	-1.5	short-chain dehydrogenase
BPHYT_RS08965		-1.0	-1.9	molybdenum cofactor biosynthesis protein MoaA
BPHYT_RS02040		-1.0	-2.4	hypothetical protein
BPHYT_RS06080		-1.0	-1.5	endonuclease IV
BPHYT_RS30810		-1.0	-1.0	transcriptional regulator
BPHYT_RS03155		-1.0	-1.8	histidine triad (HIT) protein
BPHYT_RS22030		-1.0	-2.0	peptide ABC transporter ATP-binding protein
BPHYT_RS23895		-1.0	-1.2	hypothetical protein
BPHYT_RS12660		-1.0	-2.9	Hsp33 chaperonin
BPHYT_RS35535		-1.0	-1.4	arsenic transporter
BPHYT_RS20425		-1.0	-1.6	hypothetical protein
BPHYT_RS00770		-1.0	-0.9	conjugal transfer protein TraC
BPHYT_RS29380		-1.0	-1.2	hypothetical protein
BPHYT_RS17440		-1.0	-1.9	hypothetical protein
BPHYT_RS24285		-1.0	-1.1	TetR family transcriptional regulator
BPHYT_RS30825		-1.0	-1.4	extradiol dioxygenase
BPHYT_RS16065		-1.0	-0.5	LacI family transcriptional regulator
BPHYT_RS23120		-1.0	-2.5	FAD-dependent oxidoreductase
BPHYT_RS23430		-1.0	-1.0	bifunctional D-altronate/D-mannonate dehydratase
BPHYT_RS25220		-1.0	-1.5	ferredoxin oxidoreductase
BPHYT_RS35635		-1.0	-1.7	nucleoside 2-deoxyribosyltransferase
BPHYT_RS30230		-1.0	-1.2	LysR family transcriptional regulator
BPHYT_RS15045		-1.0	-2.5	peptidase C26

Specific Phenotypes

None in this experiment

For Burkholderia phytofirmans PsJN in phage experiments