Experiment set39S435 for Burkholderia phytofirmans PsJN

Compare to:

36hr PHYTO7 MOI 0.1

200 most detrimental genes:

  gene name fitness t score description  
BPHYT_RS11705 +3.1 2.4 hypothetical protein compare
BPHYT_RS19570 +2.7 23.4 sodium/hydrogen exchanger compare
BPHYT_RS19565 +2.7 20.2 gamma-glutamyl:cysteine ligase compare
BPHYT_RS06530 +2.4 2.6 membrane protein compare
BPHYT_RS14855 +2.4 1.1 ADP-L-glycero-D-manno-heptose-6-epimerase compare
BPHYT_RS33820 +2.3 20.7 histidine kinase compare
BPHYT_RS14140 +2.2 4.8 phosphate transporter permease subunit PstC compare
BPHYT_RS04945 +2.1 19.6 membrane protein compare
BPHYT_RS04950 +2.1 16.2 hypothetical protein compare
BPHYT_RS08995 +1.9 1.2 hypothetical protein compare
BPHYT_RS02905 +1.9 16.8 RNA polymerase subunit sigma-54 compare
BPHYT_RS25935 +1.8 1.4 type III secretion protein compare
BPHYT_RS05590 +1.8 14.9 trehalose-6-phosphate synthase compare
BPHYT_RS05560 +1.8 11.1 Fis family transcriptional regulator compare
BPHYT_RS05705 +1.8 2.4 hypothetical protein compare
BPHYT_RS09815 +1.8 2.8 malate synthase compare
BPHYT_RS04940 +1.7 2.7 hypothetical protein compare
BPHYT_RS18655 +1.7 5.0 3-oxoacyl-ACP synthase compare
BPHYT_RS05575 +1.7 12.2 Fis family transcriptional regulator compare
BPHYT_RS17095 +1.6 7.0 proline--tRNA ligase compare
BPHYT_RS09390 +1.6 3.5 ABC transporter permease compare
BPHYT_RS14135 +1.6 4.3 phosphate transporter permease subunit PtsA compare
BPHYT_RS29855 +1.5 1.9 protein-tyrosine-phosphatase compare
BPHYT_RS14400 +1.5 4.1 anti-sigma factor compare
BPHYT_RS16175 +1.5 1.3 hemolysin D compare
BPHYT_RS26390 +1.4 1.5 antibiotic resistance protein compare
BPHYT_RS05615 +1.4 1.4 hypothetical protein compare
BPHYT_RS22835 +1.4 1.8 flagellar motor protein MotA compare
BPHYT_RS16710 +1.4 0.6 LysR family transcriptional regulator compare
BPHYT_RS27085 +1.4 2.5 alkylhydroperoxidase compare
BPHYT_RS02595 +1.4 2.3 sulfurtransferase compare
BPHYT_RS21950 +1.4 2.8 RND transporter compare
BPHYT_RS07570 +1.4 1.6 hypothetical protein compare
BPHYT_RS16335 +1.4 4.0 membrane protein compare
BPHYT_RS12990 +1.4 3.4 iron transporter compare
BPHYT_RS21860 +1.3 1.9 hypothetical protein compare
BPHYT_RS26685 +1.3 1.4 precorrin-8X methylmutase compare
BPHYT_RS13645 +1.3 11.9 threonine--tRNA ligase compare
BPHYT_RS14395 +1.3 6.2 sugar dehydratase compare
BPHYT_RS26510 +1.3 1.3 transcriptional regulator compare
BPHYT_RS09660 +1.3 6.9 trehalose-6-phosphate synthase compare
BPHYT_RS05670 +1.3 2.4 hypothetical protein compare
BPHYT_RS17100 +1.3 5.6 RNA pyrophosphohydrolase compare
BPHYT_RS09330 +1.3 10.1 phytoene synthase compare
BPHYT_RS04290 +1.3 0.8 glycosyl transferase family 2 compare
BPHYT_RS12845 +1.2 10.0 ATPase compare
BPHYT_RS23905 +1.2 4.9 malonate decarboxylase subunit epsilon compare
BPHYT_RS34025 +1.2 1.7 hypothetical protein compare
BPHYT_RS36090 +1.2 1.8 hypothetical protein compare
BPHYT_RS06975 +1.2 1.4 glutamate racemase compare
BPHYT_RS05610 +1.2 8.3 DNA-cytosine methyltransferase compare
BPHYT_RS14485 +1.2 5.2 ribonuclease E compare
BPHYT_RS19735 +1.2 2.4 hypothetical protein compare
BPHYT_RS12725 +1.2 9.7 regulator compare
BPHYT_RS35255 +1.2 3.4 AraC family transcriptional regulator compare
BPHYT_RS24220 +1.2 1.8 alpha/beta hydrolase compare
BPHYT_RS02865 +1.2 1.0 hypothetical protein compare
BPHYT_RS05335 +1.2 2.8 AraC family transcriptional regulator compare
BPHYT_RS17240 +1.2 0.6 cell division protein FtsW compare
BPHYT_RS25335 +1.2 0.8 hypothetical protein compare
BPHYT_RS24270 +1.2 1.5 C4-dicarboxylate ABC transporter substrate-binding protein compare
BPHYT_RS05025 +1.2 1.5 sugar ABC transporter substrate-binding protein compare
BPHYT_RS15865 +1.2 2.1 exodeoxyribonuclease VII large subunit compare
BPHYT_RS09500 +1.2 6.2 glucose-6-phosphate isomerase compare
BPHYT_RS06075 +1.2 8.1 hypothetical protein compare
BPHYT_RS25070 +1.1 1.8 choline ABC transporter permease compare
BPHYT_RS33150 +1.1 1.4 beta-lactamase compare
BPHYT_RS09825 +1.1 2.4 Fe-S protein compare
BPHYT_RS11170 +1.1 0.9 hypothetical protein compare
BPHYT_RS23955 +1.1 3.2 LysR family transcriptional regulator compare
BPHYT_RS36150 +1.1 2.1 hypothetical protein compare
BPHYT_RS21475 +1.1 1.9 hypothetical protein compare
BPHYT_RS13610 +1.1 1.6 MerR family transcriptional regulator compare
BPHYT_RS25140 +1.1 1.5 hypothetical protein compare
BPHYT_RS26930 +1.1 4.9 mechanosensitive ion channel protein compare
BPHYT_RS28670 +1.1 1.4 MFS transporter compare
BPHYT_RS12590 +1.1 1.5 dual-specificity RNA methyltransferase RlmN compare
BPHYT_RS03620 +1.1 5.9 poly(A) polymerase compare
BPHYT_RS32150 +1.1 2.1 hypothetical protein compare
BPHYT_RS03235 +1.1 3.0 enoyl-CoA hydratase compare
BPHYT_RS18600 +1.1 1.9 glutathione S-transferase compare
BPHYT_RS07515 +1.1 1.2 photosystem reaction center subunit H compare
BPHYT_RS33615 +1.1 2.1 decarboxylase compare
BPHYT_RS31785 +1.1 2.7 hypothetical protein compare
BPHYT_RS24095 +1.1 2.3 membrane protein compare
BPHYT_RS06190 +1.0 1.1 heptosyltransferase compare
BPHYT_RS20790 +1.0 0.7 TetR family transcriptional regulator compare
BPHYT_RS17445 +1.0 2.7 GTP-binding protein YchF compare
BPHYT_RS07840 +1.0 1.1 muconate cycloisomerase compare
BPHYT_RS02640 +1.0 7.8 cytochrome C oxidase compare
BPHYT_RS05320 +1.0 1.5 beta-lactamase compare
BPHYT_RS14145 +1.0 5.6 phosphate ABC transporter substrate-binding protein compare
BPHYT_RS31615 +1.0 1.2 thiamine pyrophosphate protein compare
BPHYT_RS32115 +1.0 2.5 hypothetical protein compare
BPHYT_RS20220 +1.0 0.6 antibiotic synthesis protein MbtH compare
BPHYT_RS17905 +1.0 1.9 fimbrial assembly family protein compare
BPHYT_RS34920 +1.0 1.1 IclR family transcriptional regulator compare
BPHYT_RS09860 +1.0 0.8 pilus assembly protein PilP compare
BPHYT_RS20750 +1.0 1.2 LacI family transcriptional regulator compare
BPHYT_RS08415 +1.0 1.9 hypothetical protein compare
BPHYT_RS00980 +1.0 0.9 GCN5 family acetyltransferase compare
BPHYT_RS05155 +1.0 7.3 acetyltransferase GCN5 compare
BPHYT_RS31205 +1.0 2.4 peptide ABC transporter ATP-binding protein compare
BPHYT_RS30860 +1.0 1.3 sugar ABC transporter permease compare
BPHYT_RS15285 +1.0 1.7 transcription elongation factor GreB compare
BPHYT_RS02525 +1.0 5.4 membrane protein compare
BPHYT_RS33920 +1.0 6.8 type II citrate synthase compare
BPHYT_RS03480 +1.0 4.1 ferritin compare
BPHYT_RS25095 +1.0 1.2 AraC family transcriptional regulator compare
BPHYT_RS06175 +1.0 3.0 LPS biosynthesis compare
BPHYT_RS00295 +1.0 2.6 hypothetical protein compare
BPHYT_RS08850 +1.0 0.5 transcriptional regulator compare
BPHYT_RS26490 +1.0 0.8 hypothetical protein compare
BPHYT_RS28350 +0.9 1.7 fatty acid desaturase compare
BPHYT_RS09260 +0.9 1.6 histidine kinase compare
BPHYT_RS14845 +0.9 0.8 cysteine synthase compare
BPHYT_RS01985 +0.9 2.8 hypothetical protein compare
BPHYT_RS04430 +0.9 1.5 amino acid ABC transporter ATPase compare
BPHYT_RS17885 +0.9 2.6 3-dehydroquinate synthase compare
BPHYT_RS16340 +0.9 2.8 succinyl-CoA synthetase subunit alpha compare
BPHYT_RS09000 +0.9 0.9 competence protein ComE compare
BPHYT_RS28305 +0.9 1.0 protein tyrosine phosphatase compare
BPHYT_RS06470 +0.9 1.5 membrane protein compare
BPHYT_RS32200 +0.9 3.6 lytic transglycosylase compare
BPHYT_RS11425 +0.9 2.6 chemotaxis protein compare
BPHYT_RS34485 +0.9 1.8 diguanylate phosphodiesterase compare
BPHYT_RS01170 +0.9 1.0 hypothetical protein compare
BPHYT_RS03455 +0.9 1.7 paraquat-inducible protein A compare
BPHYT_RS28595 +0.9 1.0 glyoxalase compare
BPHYT_RS21700 +0.9 1.5 phosphotransacetylase compare
BPHYT_RS30045 +0.9 1.8 ATPase AAA compare
BPHYT_RS06605 +0.9 2.3 NAD(P)H quinone oxidoreductase compare
BPHYT_RS34185 +0.9 2.6 cold-shock protein compare
BPHYT_RS25025 +0.9 1.8 acyl-CoA dehydrogenase compare
BPHYT_RS23610 +0.9 1.8 alpha/beta hydrolase compare
BPHYT_RS22715 +0.9 1.9 L-2-keto-3-deoxyarabonate dehydratase (EC 4.2.1.43) (from data) compare
BPHYT_RS23910 +0.9 2.7 phosphoribosyl-dephospho-CoA transferase compare
BPHYT_RS02120 +0.9 2.7 hypothetical protein compare
BPHYT_RS34495 +0.9 2.3 phenol degradation protein meta compare
BPHYT_RS31060 +0.9 1.1 capsular polysaccharide biosynthesis protein compare
BPHYT_RS10095 +0.9 0.9 integrase compare
BPHYT_RS24405 +0.9 2.7 type VI secretion system effector compare
BPHYT_RS22540 +0.9 1.6 metal ABC transporter permease compare
BPHYT_RS11815 +0.9 1.0 alcohol dehydrogenase compare
BPHYT_RS12150 +0.9 6.6 PII uridylyl-transferase compare
BPHYT_RS06985 +0.9 4.1 fumarate hydratase compare
BPHYT_RS09640 +0.9 3.8 DNAase compare
BPHYT_RS03090 +0.9 1.5 hypothetical protein compare
BPHYT_RS34700 +0.9 1.7 arsenate reductase compare
BPHYT_RS08510 +0.9 1.4 acyl-CoA dehydrogenase compare
BPHYT_RS00150 +0.9 2.6 DEAD/DEAH box helicase compare
BPHYT_RS08470 +0.9 1.9 glycosyl transferase compare
BPHYT_RS05570 +0.9 3.0 hypothetical protein compare
BPHYT_RS04120 +0.9 3.0 protein tyrosine kinase compare
BPHYT_RS23395 +0.9 1.2 glycosyl transferase compare
BPHYT_RS31685 +0.9 1.9 D-isomer specific 2-hydroxyacid dehydrogenase compare
BPHYT_RS32165 +0.9 2.7 type IV secretion system protein VirB9 compare
BPHYT_RS26310 +0.9 1.2 ribonuclease R compare
BPHYT_RS06610 +0.9 1.1 triosephosphate isomerase compare
BPHYT_RS04005 +0.8 1.6 GDP-L-fucose synthase compare
BPHYT_RS22525 +0.8 1.6 dioxygenase compare
BPHYT_RS36480 +0.8 2.1 hypothetical protein compare
BPHYT_RS20850 +0.8 2.0 multidrug DMT transporter permease compare
BPHYT_RS16570 +0.8 1.0 glutathione S-transferase compare
BPHYT_RS33130 +0.8 1.2 transcriptional regulator compare
BPHYT_RS28995 +0.8 2.0 histidine kinase compare
BPHYT_RS11040 +0.8 1.5 GntR family transcriptional regulator compare
BPHYT_RS30020 +0.8 1.9 arsenic transporter compare
BPHYT_RS02635 +0.8 5.4 membrane protein compare
BPHYT_RS16060 +0.8 1.6 ribonucleotide-diphosphate reductase subunit alpha compare
BPHYT_RS16345 +0.8 2.5 succinyl-CoA ligase [ADP-forming] subunit beta compare
BPHYT_RS14340 +0.8 5.8 Fis family transcriptional regulator compare
BPHYT_RS11495 +0.8 1.6 membrane protein compare
BPHYT_RS01435 +0.8 7.1 LysR family transcriptional regulator compare
BPHYT_RS26975 +0.8 1.1 L-lactate dehydrogenase, LldE subunit (from data) compare
BPHYT_RS08945 +0.8 6.0 hypothetical protein compare
BPHYT_RS24925 +0.8 1.3 cytochrome O ubiquinol oxidase compare
BPHYT_RS34040 +0.8 2.1 hypothetical protein compare
BPHYT_RS17640 +0.8 0.8 2-alkenal reductase compare
BPHYT_RS26300 +0.8 0.8 ATP-dependent DNA ligase compare
BPHYT_RS04285 +0.8 0.4 rhamnosyltransferase compare
BPHYT_RS03625 +0.8 3.4 Histidinol-phosphatase (EC:3.1.3.15) (from data) compare
BPHYT_RS22135 +0.8 1.1 3-ketoacyl-ACP reductase compare
BPHYT_RS25575 +0.8 0.9 alpha/beta hydrolase compare
BPHYT_RS29235 +0.8 1.2 cell shape determination protein CcmA compare
BPHYT_RS32960 +0.8 1.9 short-chain dehydrogenase compare
BPHYT_RS35235 +0.8 1.9 amino acid transporter compare
BPHYT_RS15660 +0.8 3.5 mechanosensitive ion channel protein MscS compare
BPHYT_RS10400 +0.8 0.8 taurine ABC transporter permease compare
BPHYT_RS16020 +0.8 0.8 AsnC family transcriptional regulator compare
BPHYT_RS23270 +0.8 1.0 enoyl-CoA hydratase compare
BPHYT_RS14245 +0.8 0.7 membrane protein compare
BPHYT_RS12825 +0.8 1.7 phasin family protein compare
BPHYT_RS22870 +0.8 0.7 copper transporter compare
BPHYT_RS24390 +0.8 2.7 hypothetical protein compare
BPHYT_RS34470 +0.8 1.7 ABC transporter compare
BPHYT_RS02900 +0.8 2.2 ribosome hibernation promoting factor compare
BPHYT_RS07690 +0.8 1.2 AraC family transcriptional regulator compare
BPHYT_RS20590 +0.8 1.0 methionine sulfoxide reductase A compare
BPHYT_RS32395 +0.8 0.6 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Burkholderia phytofirmans PsJN in phage experiments