Experiment set39S433 for Burkholderia phytofirmans PsJN

Compare to:

36hr PHYTO7 MOI 1

200 most important genes:

  gene name fitness t score description  
BPHYT_RS29745 -4.0 -2.2 phosphonopyruvate decarboxylase compare
BPHYT_RS21335 -3.8 -1.2 CDP-alcohol phosphatidyltransferase compare
BPHYT_RS23990 -3.7 -1.2 N-hydroxyarylamine O-acetyltransferase compare
BPHYT_RS07320 -3.6 -1.2 dihydrodipicolinate synthetase compare
BPHYT_RS05690 -3.4 -1.6 hypothetical protein compare
BPHYT_RS23035 -3.4 -2.2 hypothetical protein compare
BPHYT_RS06710 -3.3 -1.1 hypothetical protein compare
BPHYT_RS19985 -3.3 -1.1 CoA-transferase compare
BPHYT_RS10650 -3.3 -1.1 membrane protein compare
BPHYT_RS33805 -3.3 -1.1 hypothetical protein compare
BPHYT_RS08335 -3.2 -1.0 hypothetical protein compare
BPHYT_RS10240 -3.2 -1.0 translation initiation inhibitor compare
BPHYT_RS30490 -3.1 -1.0 2-haloalkanoic acid dehalogenase compare
BPHYT_RS22260 -2.9 -1.3 hypothetical protein compare
BPHYT_RS18660 -2.9 -2.0 hypothetical protein compare
BPHYT_RS36035 -2.8 -1.2 hypothetical protein compare
BPHYT_RS09905 -2.8 -0.9 hypothetical protein compare
BPHYT_RS23100 -2.7 -1.7 sugar ABC transporter substrate-binding protein compare
BPHYT_RS26470 -2.7 -0.9 MFS transporter compare
BPHYT_RS34655 -2.7 -1.2 2-amino-3-ketobutyrate CoA ligase compare
BPHYT_RS26080 -2.6 -0.8 ABC transporter ATPase compare
BPHYT_RS31125 -2.6 -2.2 hypothetical protein compare
BPHYT_RS26490 -2.6 -0.8 hypothetical protein compare
BPHYT_RS08525 -2.5 -0.8 SAM-dependent methyltransferase compare
BPHYT_RS19610 -2.5 -1.1 general secretion pathway protein GspC compare
BPHYT_RS09860 -2.4 -0.8 pilus assembly protein PilP compare
BPHYT_RS29870 -2.4 -1.1 2-dehydropantoate 2-reductase compare
BPHYT_RS10095 -2.4 -1.3 integrase compare
BPHYT_RS18760 -2.4 -1.8 flagellar biosynthesis protein FliT compare
BPHYT_RS12925 -2.4 -0.8 exodeoxyribonuclease III compare
BPHYT_RS23460 -2.4 -0.8 AraC family transcriptional regulator compare
BPHYT_RS11765 -2.4 -0.8 polyamine ABC transporter permease compare
BPHYT_RS23650 -2.3 -0.7 hypothetical protein compare
BPHYT_RS27430 -2.3 -1.0 LysR family transcriptional regulator compare
BPHYT_RS00325 -2.3 -1.7 hypothetical protein compare
BPHYT_RS08645 -2.3 -1.3 sulfonate ABC transporter compare
BPHYT_RS09895 -2.3 -1.0 LysR family transcriptional regulator compare
BPHYT_RS25515 -2.2 -1.3 glutathione S-transferase compare
BPHYT_RS17920 -2.2 -1.2 protein CyaY compare
BPHYT_RS08415 -2.2 -1.5 hypothetical protein compare
BPHYT_RS35205 -2.2 -1.7 hypothetical protein compare
BPHYT_RS27560 -2.1 -0.9 histidine kinase compare
BPHYT_RS11635 -2.1 -0.7 RNA polymerase subunit sigma-24 compare
BPHYT_RS28055 -2.1 -2.0 membrane protein compare
BPHYT_RS02985 -2.0 -1.7 MaoC family dehydratase compare
BPHYT_RS33765 -2.0 -0.6 membrane protein compare
BPHYT_RS30775 -2.0 -1.2 gluconate 2-dehydrogenase compare
BPHYT_RS00815 -2.0 -0.9 hypothetical protein compare
BPHYT_RS07480 -2.0 -0.9 FAD-dependent oxidoreductase compare
BPHYT_RS20165 -2.0 -1.3 UDP-N-acetyl-D-mannosamine dehydrogenase compare
BPHYT_RS15890 -2.0 -0.9 3-hydroxy-2-methylbutyryl-CoA dehydrogenase compare
BPHYT_RS24315 -1.9 -1.1 phosphoribosyltransferase compare
BPHYT_RS31305 -1.9 -1.7 alcohol dehydrogenase compare
BPHYT_RS13315 -1.9 -1.5 dihydropyrimidine dehydrogenase subunit A compare
BPHYT_RS08235 -1.9 -0.6 nucleoprotein, Hfg, host factor I compare
BPHYT_RS23170 -1.9 -1.3 XRE family transcriptional regulator compare
BPHYT_RS26385 -1.9 -1.0 glutamine amidotransferase compare
BPHYT_RS04095 -1.9 -0.8 SAM-dependent methyltransferase PhcB compare
BPHYT_RS20095 -1.8 -0.8 transcriptional regulator compare
BPHYT_RS11680 -1.8 -1.0 protein-L-isoaspartate O-methyltransferase compare
BPHYT_RS34675 -1.8 -2.3 DNA-binding protein compare
BPHYT_RS12280 -1.8 -0.7 RNA helicase compare
BPHYT_RS33580 -1.8 -2.9 geranyltranstransferase compare
BPHYT_RS04330 -1.8 -7.5 hypothetical protein compare
BPHYT_RS05870 -1.8 -2.3 hypothetical protein compare
BPHYT_RS10540 -1.7 -0.8 secretion protein compare
BPHYT_RS26775 -1.7 -0.7 chemotaxis protein CheB compare
BPHYT_RS13250 -1.7 -1.9 hypothetical protein compare
BPHYT_RS24925 -1.7 -1.2 cytochrome O ubiquinol oxidase compare
BPHYT_RS27455 -1.7 -0.7 rod shape-determining protein MreB compare
BPHYT_RS23940 -1.6 -0.7 GntR family transcriptional regulator compare
BPHYT_RS02760 -1.6 -0.7 cytochrome BD oxidase subunit II compare
BPHYT_RS21940 -1.6 -1.5 hemolysin D compare
BPHYT_RS04965 -1.6 -4.4 ATP-binding protein compare
BPHYT_RS33355 -1.6 -3.1 oxalyl-CoA decarboxylase compare
BPHYT_RS13450 -1.6 -1.0 GntR family transcriptional regulator compare
BPHYT_RS33135 -1.6 -1.1 LysR family transcriptional regulator compare
BPHYT_RS34745 -1.6 -0.7 hypothetical protein compare
BPHYT_RS28485 -1.6 -0.5 GntR family transcriptional regulator compare
BPHYT_RS01180 -1.6 -2.3 AraC family transcriptional regulator compare
BPHYT_RS17765 -1.6 -5.4 toluene ABC transporter ATP-binding protein compare
BPHYT_RS19890 -1.6 -1.4 hypothetical protein compare
BPHYT_RS07660 -1.6 -1.3 sulfonate ABC transporter substrate-binding protein compare
BPHYT_RS12615 -1.5 -0.5 dihydrodipicolinate synthase compare
BPHYT_RS35085 -1.5 -0.8 transcriptional regulator compare
BPHYT_RS00835 -1.5 -1.5 plasmid stabilization protein compare
BPHYT_RS10390 -1.5 -2.3 nitrate ABC transporter substrate-binding protein compare
BPHYT_RS34810 -1.5 -1.9 RND transporter compare
BPHYT_RS04340 -1.5 -1.0 hypothetical protein compare
BPHYT_RS34860 -1.5 -1.9 chemotaxis protein compare
BPHYT_RS36365 -1.5 -0.8 hypothetical protein compare
BPHYT_RS29155 -1.5 -2.4 hypothetical protein compare
BPHYT_RS02755 -1.5 -1.1 cyd operon protein YbgT compare
BPHYT_RS25845 -1.5 -0.7 RND transporter MFP subunit compare
BPHYT_RS22865 -1.5 -1.5 ATPase compare
BPHYT_RS08965 -1.5 -2.6 molybdenum cofactor biosynthesis protein MoaA compare
BPHYT_RS36130 -1.5 -0.8 hypothetical protein compare
BPHYT_RS03410 -1.5 -1.1 queuine tRNA-ribosyltransferase compare
BPHYT_RS10125 -1.4 -0.9 hypothetical protein compare
BPHYT_RS32930 -1.4 -1.2 NADPH:quinone reductase and related Zn-dependent oxidoreductase-like protein compare
BPHYT_RS04350 -1.4 -5.1 membrane protein compare
BPHYT_RS29740 -1.4 -2.5 2-aminoethylphosphonate aminotransferase compare
BPHYT_RS36525 -1.4 -0.9 hypothetical protein compare
BPHYT_RS26060 -1.4 -2.4 allophanate hydrolase compare
BPHYT_RS21170 -1.4 -1.2 LysR family transcriptional regulator compare
BPHYT_RS09155 -1.4 -2.0 3-ketoacyl-ACP reductase compare
BPHYT_RS34270 -1.4 -2.6 LysR family transcriptional regulator compare
BPHYT_RS28870 -1.4 -1.0 MarR family transcriptional regulator compare
BPHYT_RS28470 -1.4 -0.6 hypothetical protein compare
BPHYT_RS05460 -1.4 -2.2 chloroperoxidase compare
BPHYT_RS02575 -1.4 -6.6 phosphoenolpyruvate-protein phosphotransferase compare
BPHYT_RS26340 -1.4 -1.3 cupin compare
BPHYT_RS29165 -1.4 -2.2 hypothetical protein compare
BPHYT_RS25780 -1.4 -0.4 DeoR faimly transcriptional regulator compare
BPHYT_RS17620 -1.4 -5.1 cytochrome C compare
BPHYT_RS08830 -1.4 -3.5 hydroxypyruvate isomerase compare
BPHYT_RS12295 -1.3 -1.3 LysR family transcriptional regulator compare
BPHYT_RS09195 -1.3 -1.1 hypothetical protein compare
BPHYT_RS22930 -1.3 -0.6 type II secretion system protein compare
BPHYT_RS30130 -1.3 -2.5 AraC family transcriptional regulator compare
BPHYT_RS10305 -1.3 -0.8 hypothetical protein compare
BPHYT_RS01625 -1.3 -1.3 chemotaxis protein CheY compare
BPHYT_RS01825 -1.3 -2.4 sugar ABC transporter substrate-binding protein compare
BPHYT_RS02860 -1.3 -0.4 membrane protein compare
BPHYT_RS30800 -1.3 -0.8 MFS transporter compare
BPHYT_RS04885 -1.3 -1.3 threonine-phosphate decarboxylase compare
BPHYT_RS02570 -1.3 -5.1 phosphocarrier protein HPr compare
BPHYT_RS17240 -1.3 -0.4 cell division protein FtsW compare
BPHYT_RS28245 -1.3 -1.0 MFS transporter compare
BPHYT_RS04365 -1.3 -5.4 membrane protein compare
BPHYT_RS02040 -1.3 -2.9 hypothetical protein compare
BPHYT_RS13320 -1.3 -0.7 allantoate amidohydrolase compare
BPHYT_RS29485 -1.3 -1.2 phosphonate ABC transporter ATP-binding protein compare
BPHYT_RS12065 -1.3 -1.6 RNA methyltransferase compare
BPHYT_RS26115 -1.3 -1.5 polysaccharide deacetylase compare
BPHYT_RS28840 -1.3 -2.0 oxidoreductase compare
BPHYT_RS17030 -1.3 -0.8 lipid hydroperoxide peroxidase compare
BPHYT_RS19945 -1.3 -1.8 hypothetical protein compare
BPHYT_RS17395 -1.2 -1.2 anthranilate synthase subunit II compare
BPHYT_RS00980 -1.2 -0.6 GCN5 family acetyltransferase compare
BPHYT_RS14550 -1.2 -0.5 tRNA-Asn compare
BPHYT_RS21625 -1.2 -0.6 LysR family transcriptional regulator compare
BPHYT_RS08665 -1.2 -0.5 hypothetical protein compare
BPHYT_RS17520 -1.2 -2.2 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase compare
BPHYT_RS30790 -1.2 -2.1 porin compare
BPHYT_RS14840 -1.2 -5.6 lytic transglycosylase compare
BPHYT_RS27875 -1.2 -1.4 CreA family protein compare
BPHYT_RS10065 -1.2 -0.7 cytochrome C oxidase subunit I compare
BPHYT_RS14245 -1.2 -0.5 membrane protein compare
BPHYT_RS21620 -1.2 -0.8 GCN5 family acetyltransferase compare
BPHYT_RS11155 -1.2 -0.7 hypothetical protein compare
BPHYT_RS07325 -1.2 -0.4 GntR family transcriptional regulator compare
BPHYT_RS11890 -1.2 -1.5 hypothetical protein compare
BPHYT_RS15515 -1.2 -2.8 D-aminopeptidase compare
BPHYT_RS08995 -1.2 -0.5 hypothetical protein compare
BPHYT_RS26280 -1.2 -1.3 hypothetical protein compare
BPHYT_RS08420 -1.2 -1.0 histidine kinase compare
BPHYT_RS18465 -1.2 -5.0 membrane protein compare
BPHYT_RS06990 -1.2 -0.5 membrane protein compare
BPHYT_RS32360 -1.2 -0.7 spermidine/putrescine ABC transporter ATPase compare
BPHYT_RS30340 -1.2 -1.0 AraC family transcriptional regulator compare
BPHYT_RS29300 -1.2 -1.3 endoribonuclease L-PSP compare
BPHYT_RS26380 -1.2 -0.9 cobalamin biosynthesis protein CobT compare
BPHYT_RS11100 -1.1 -1.4 methyltransferase compare
BPHYT_RS05650 -1.1 -0.9 hypothetical protein compare
BPHYT_RS10440 -1.1 -1.9 GntR family transcriptional regulator compare
BPHYT_RS31725 -1.1 -1.1 hypothetical protein compare
BPHYT_RS17760 -1.1 -3.9 ABC transporter permease compare
BPHYT_RS09355 -1.1 -0.9 LysR family transcriptional regulator compare
BPHYT_RS36360 -1.1 -1.3 hypothetical protein compare
BPHYT_RS02885 -1.1 -5.3 glmZ(sRNA)-inactivating NTPase compare
BPHYT_RS07050 -1.1 -0.5 membrane protein compare
BPHYT_RS12820 -1.1 -3.5 D-alanyl-D-alanine carboxypeptidase compare
BPHYT_RS02815 -1.1 -1.7 methyltransferase compare
BPHYT_RS29655 -1.1 -1.1 polysaccharide deacetylase compare
BPHYT_RS24945 -1.1 -2.2 alkylhydroperoxidase compare
BPHYT_RS24205 -1.1 -2.0 aldolase compare
BPHYT_RS29945 -1.1 -0.8 histidine kinase compare
BPHYT_RS23895 -1.1 -0.9 hypothetical protein compare
BPHYT_RS04730 -1.1 -2.7 required for sulfate utilization, putative electron transport protein for sulfite reductase (from data) compare
BPHYT_RS13395 -1.1 -0.9 endoribonuclease L-PSP compare
BPHYT_RS28635 -1.1 -1.2 hypothetical protein compare
BPHYT_RS01975 -1.1 -0.8 hypothetical protein compare
BPHYT_RS23645 -1.1 -1.9 phosphohydrolase compare
BPHYT_RS31700 -1.1 -1.7 porin compare
BPHYT_RS14060 -1.1 -0.8 peptidase M23 compare
BPHYT_RS09655 -1.1 -2.6 mechanosensitive ion channel protein MscS compare
BPHYT_RS34780 -1.1 -1.8 phytoene synthase compare
BPHYT_RS28300 -1.1 -0.5 histone nucleoid-structuring protein H-NS compare
BPHYT_RS10585 -1.1 -2.7 molecular chaperone DnaK compare
BPHYT_RS04430 -1.1 -0.8 amino acid ABC transporter ATPase compare
BPHYT_RS35535 -1.1 -2.0 arsenic transporter compare
BPHYT_RS28440 -1.1 -1.4 heat shock Hsp20 compare
BPHYT_RS05550 -1.1 -2.8 hypothetical protein compare
BPHYT_RS24125 -1.1 -1.3 endopolygalacturonase compare
BPHYT_RS17810 -1.1 -2.3 transcriptional regulator compare
BPHYT_RS35735 -1.1 -1.1 nitroreductase compare
BPHYT_RS15165 -1.1 -1.6 histidine ammonia-lyase compare
BPHYT_RS32270 -1.1 -1.4 transposase compare
BPHYT_RS24730 -1.1 -1.8 AraC family transcriptional regulator compare


Specific Phenotypes

None in this experiment

For Burkholderia phytofirmans PsJN in phage experiments