Experiment set39S416 for Burkholderia phytofirmans PsJN

Compare to:

24hr PHYTO11 MOI 1

200 most important genes:

  gene name fitness t score description  
BPHYT_RS01485 -4.3 -1.4 histidine kinase compare
BPHYT_RS06710 -3.7 -1.2 hypothetical protein compare
BPHYT_RS09280 -3.5 -1.1 pyridoxal-5'-phosphate-dependent protein subunit beta compare
BPHYT_RS26470 -3.4 -1.1 MFS transporter compare
BPHYT_RS04365 -3.2 -8.9 membrane protein compare
BPHYT_RS25830 -3.1 -2.7 sugar ABC transporter substrate-binding protein compare
BPHYT_RS13450 -3.1 -1.4 GntR family transcriptional regulator compare
BPHYT_RS31050 -3.0 -1.0 epimerase compare
BPHYT_RS28370 -2.9 -1.3 peroxidase compare
BPHYT_RS04350 -2.9 -8.9 membrane protein compare
BPHYT_RS09860 -2.8 -0.9 pilus assembly protein PilP compare
BPHYT_RS26025 -2.8 -0.9 hypothetical protein compare
BPHYT_RS18705 -2.7 -1.5 5,10-methylenetetrahydrofolate reductase compare
BPHYT_RS22500 -2.7 -2.4 transcriptional regulator compare
BPHYT_RS34810 -2.7 -2.5 RND transporter compare
BPHYT_RS30450 -2.7 -0.9 ABC transporter permease compare
BPHYT_RS10005 -2.7 -1.2 hypothetical protein compare
BPHYT_RS12510 -2.6 -1.4 RNA-binding protein compare
BPHYT_RS29720 -2.6 -1.1 molybdopterin-guanine dinucleotide biosynthesis protein MobA compare
BPHYT_RS27230 -2.5 -1.1 hypothetical protein compare
BPHYT_RS28860 -2.5 -1.1 haloacid dehalogenase compare
BPHYT_RS28360 -2.4 -1.1 carboxymuconolactone decarboxylase compare
BPHYT_RS23650 -2.4 -0.8 hypothetical protein compare
BPHYT_RS25095 -2.4 -2.1 AraC family transcriptional regulator compare
BPHYT_RS21335 -2.3 -1.3 CDP-alcohol phosphatidyltransferase compare
BPHYT_RS26660 -2.3 -2.1 precorrin-4 C11-methyltransferase compare
BPHYT_RS27030 -2.3 -1.0 transcriptional regulator compare
BPHYT_RS28885 -2.3 -1.3 betaine-aldehyde dehydrogenase compare
BPHYT_RS32815 -2.3 -1.9 sugar ABC transporter compare
BPHYT_RS24315 -2.3 -1.2 phosphoribosyltransferase compare
BPHYT_RS04370 -2.2 -0.7 glycosyl transferase compare
BPHYT_RS27995 -2.2 -1.6 hypothetical protein compare
BPHYT_RS20790 -2.2 -1.0 TetR family transcriptional regulator compare
BPHYT_RS08335 -2.2 -1.0 hypothetical protein compare
BPHYT_RS14735 -2.2 -1.0 hypothetical protein compare
BPHYT_RS32395 -2.2 -0.7 hypothetical protein compare
BPHYT_RS34745 -2.1 -1.0 hypothetical protein compare
BPHYT_RS28485 -2.1 -0.7 GntR family transcriptional regulator compare
BPHYT_RS11410 -2.1 -2.3 TetR family transcriptional regulator compare
BPHYT_RS08995 -2.1 -0.9 hypothetical protein compare
BPHYT_RS36275 -2.1 -1.1 hypothetical protein compare
BPHYT_RS22360 -2.1 -1.1 response regulator receiver compare
BPHYT_RS25480 -2.0 -2.6 hypothetical protein compare
BPHYT_RS13735 -2.0 -2.7 membrane protein compare
BPHYT_RS27850 -2.0 -1.1 hemerythrin compare
BPHYT_RS18610 -2.0 -4.0 lytic transglycosylase compare
BPHYT_RS11150 -2.0 -1.5 LysR family transcriptional regulator compare
BPHYT_RS12900 -2.0 -1.4 transposase compare
BPHYT_RS17905 -2.0 -1.7 fimbrial assembly family protein compare
BPHYT_RS33690 -1.9 -1.1 molybdate ABC transporter permease compare
BPHYT_RS26525 -1.9 -0.9 amino acid ABC transporter substrate-binding protein compare
BPHYT_RS10240 -1.9 -0.9 translation initiation inhibitor compare
BPHYT_RS36385 -1.9 -0.6 TetR family transcriptional regulator compare
BPHYT_RS11635 -1.9 -0.6 RNA polymerase subunit sigma-24 compare
BPHYT_RS09315 -1.9 -0.6 chemotaxis protein CheY compare
BPHYT_RS16180 -1.8 -0.6 TetR family transcriptional regulator compare
BPHYT_RS21805 -1.8 -1.5 transcriptional regulator compare
BPHYT_RS29655 -1.8 -1.6 polysaccharide deacetylase compare
BPHYT_RS02180 -1.8 -1.7 hypothetical protein compare
BPHYT_RS25515 -1.8 -1.4 glutathione S-transferase compare
BPHYT_RS26080 -1.8 -0.8 ABC transporter ATPase compare
BPHYT_RS25335 -1.8 -0.5 hypothetical protein compare
BPHYT_RS23940 -1.7 -1.0 GntR family transcriptional regulator compare
BPHYT_RS36130 -1.7 -0.9 hypothetical protein compare
BPHYT_RS19660 -1.7 -1.2 hypothetical protein compare
BPHYT_RS33045 -1.7 -1.1 response regulator receiver protein compare
BPHYT_RS17240 -1.7 -0.5 cell division protein FtsW compare
BPHYT_RS07845 -1.7 -2.7 LysR family transcriptional regulator compare
BPHYT_RS01180 -1.7 -2.3 AraC family transcriptional regulator compare
BPHYT_RS29380 -1.7 -1.7 hypothetical protein compare
BPHYT_RS33850 -1.6 -0.7 sporulation protein compare
BPHYT_RS14670 -1.6 -0.9 hypothetical protein compare
BPHYT_RS05290 -1.6 -0.7 hypothetical protein compare
BPHYT_RS18760 -1.6 -1.1 flagellar biosynthesis protein FliT compare
BPHYT_RS10345 -1.6 -0.9 flagellar motor protein MotB compare
BPHYT_RS15615 -1.6 -2.2 4-hydroxy-3-methylbut-2-enyl diphosphate reductase compare
BPHYT_RS04335 -1.6 -0.9 membrane protein compare
BPHYT_RS04340 -1.6 -1.1 hypothetical protein compare
BPHYT_RS05485 -1.6 -1.4 nitrogen regulatory protein P-II 1 compare
BPHYT_RS03280 -1.6 -0.7 mannose-1-phosphate guanylyltransferase compare
BPHYT_RS23920 -1.6 -2.1 malonate decarboxylase subunit beta compare
BPHYT_RS30140 -1.6 -0.7 3-methylitaconate isomerase compare
BPHYT_RS26575 -1.6 -1.6 hypothetical protein compare
BPHYT_RS16555 -1.6 -2.1 cation transporter compare
BPHYT_RS15090 -1.6 -4.2 xanthine dehydrogenase accessory protein XdhC compare
BPHYT_RS09000 -1.6 -0.7 competence protein ComE compare
BPHYT_RS30085 -1.6 -1.0 hypothetical protein compare
BPHYT_RS17075 -1.5 -2.5 ABC transporter permease compare
BPHYT_RS25080 -1.5 -1.2 glycine/betaine ABC transporter substrate-binding protein compare
BPHYT_RS23880 -1.5 -1.1 sugar ABC transporter permease compare
BPHYT_RS29920 -1.5 -0.7 hypothetical protein compare
BPHYT_RS09585 -1.5 -0.8 hypothetical protein compare
BPHYT_RS21470 -1.5 -2.0 6-hydroxynicotinate reductase compare
BPHYT_RS20590 -1.5 -1.6 methionine sulfoxide reductase A compare
BPHYT_RS12550 -1.5 -0.6 GTP-binding protein HflX compare
BPHYT_RS11890 -1.5 -1.7 hypothetical protein compare
BPHYT_RS01625 -1.4 -1.4 chemotaxis protein CheY compare
BPHYT_RS14895 -1.4 -1.0 3-phosphoshikimate 1-carboxyvinyltransferase compare
BPHYT_RS13395 -1.4 -1.2 endoribonuclease L-PSP compare
BPHYT_RS26740 -1.4 -1.1 hypothetical protein compare
BPHYT_RS10205 -1.4 -2.2 D-lactate dehydrogenase compare
BPHYT_RS04885 -1.4 -1.5 threonine-phosphate decarboxylase compare
BPHYT_RS05460 -1.4 -2.3 chloroperoxidase compare
BPHYT_RS04330 -1.4 -3.9 hypothetical protein compare
BPHYT_RS21620 -1.4 -0.9 GCN5 family acetyltransferase compare
BPHYT_RS08775 -1.4 -3.1 membrane protein compare
BPHYT_RS02860 -1.4 -0.4 membrane protein compare
BPHYT_RS09205 -1.4 -1.4 cytochrome P450 compare
BPHYT_RS06410 -1.4 -1.5 transcriptional regulator compare
BPHYT_RS13705 -1.4 -1.6 chorismate synthase compare
BPHYT_RS11995 -1.4 -2.0 flagellar hook protein FlgE compare
BPHYT_RS20060 -1.4 -0.9 hypothetical protein compare
BPHYT_RS08020 -1.4 -1.7 hypothetical protein compare
BPHYT_RS32260 -1.4 -0.6 hypothetical protein compare
BPHYT_RS28110 -1.4 -1.0 hypothetical protein compare
BPHYT_RS20235 -1.4 -3.3 iron ABC transporter compare
BPHYT_RS04320 -1.3 -4.0 hypothetical protein compare
BPHYT_RS04400 -1.3 -1.3 Crp/Fnr family transcriptional regulator compare
BPHYT_RS25220 -1.3 -1.6 ferredoxin oxidoreductase compare
BPHYT_RS02575 -1.3 -7.3 phosphoenolpyruvate-protein phosphotransferase compare
BPHYT_RS22840 -1.3 -1.6 motility protein B compare
BPHYT_RS05900 -1.3 -1.6 hypothetical protein compare
BPHYT_RS02415 -1.3 -2.3 cytochrome C550 compare
BPHYT_RS02570 -1.3 -6.2 phosphocarrier protein HPr compare
BPHYT_RS11745 -1.3 -0.6 (2Fe-2S)-binding protein compare
BPHYT_RS28300 -1.3 -0.6 histone nucleoid-structuring protein H-NS compare
BPHYT_RS24755 -1.3 -1.9 catalase compare
BPHYT_RS16815 -1.3 -1.6 ureidoglycolate hydrolase compare
BPHYT_RS06470 -1.3 -1.0 membrane protein compare
BPHYT_RS17265 -1.3 -0.9 cell division protein compare
BPHYT_RS04415 -1.3 -1.9 N-acylglucosamine 2-epimerase compare
BPHYT_RS11280 -1.3 -3.7 membrane protein compare
BPHYT_RS25980 -1.3 -0.7 urea carboxylase compare
BPHYT_RS23770 -1.3 -1.3 GntR family transcriptional regulator compare
BPHYT_RS29945 -1.3 -0.9 histidine kinase compare
BPHYT_RS05905 -1.3 -0.8 hypothetical protein compare
BPHYT_RS13210 -1.3 -3.2 hypothetical protein compare
BPHYT_RS06990 -1.3 -0.5 membrane protein compare
BPHYT_RS30490 -1.3 -0.6 2-haloalkanoic acid dehalogenase compare
BPHYT_RS36355 -1.3 -1.1 hypothetical protein compare
BPHYT_RS20545 -1.2 -1.4 hypothetical protein compare
BPHYT_RS29870 -1.2 -0.8 2-dehydropantoate 2-reductase compare
BPHYT_RS23315 -1.2 -0.8 hypothetical protein compare
BPHYT_RS04215 -1.2 -1.8 hypothetical protein compare
BPHYT_RS21530 -1.2 -1.2 RNA polymerase subunit sigma-24 compare
BPHYT_RS26200 -1.2 -1.3 acetate kinase compare
BPHYT_RS08165 -1.2 -0.9 pilus assembly protein TadE compare
BPHYT_RS22885 -1.2 -1.6 hypothetical protein compare
BPHYT_RS29950 -1.2 -0.9 hypothetical protein compare
BPHYT_RS07320 -1.2 -0.7 dihydrodipicolinate synthetase compare
BPHYT_RS29110 -1.2 -1.8 DNA-directed DNA polymerase compare
BPHYT_RS05810 -1.2 -2.3 hypothetical protein compare
BPHYT_RS08600 -1.2 -1.0 hypothetical protein compare
BPHYT_RS22945 -1.2 -2.0 pilus assembly protein TadE compare
BPHYT_RS25295 -1.2 -0.9 cobalt transporter compare
BPHYT_RS32210 -1.2 -0.7 hypothetical protein compare
BPHYT_RS07050 -1.2 -0.7 membrane protein compare
BPHYT_RS20365 -1.2 -1.8 LysR family transcriptional regulator compare
BPHYT_RS29830 -1.2 -1.3 hypothetical protein compare
BPHYT_RS23275 -1.2 -1.6 3-methylcrotonyl-CoA carboxylase subunit alpha compare
BPHYT_RS35275 -1.2 -1.2 acetyltransferase compare
BPHYT_RS20750 -1.2 -0.9 LacI family transcriptional regulator compare
BPHYT_RS12535 -1.2 -0.5 membrane protein compare
BPHYT_RS27270 -1.2 -1.6 photosystem reaction center subunit H compare
BPHYT_RS31840 -1.2 -1.2 anhydrase compare
BPHYT_RS29005 -1.2 -2.2 transporter compare
BPHYT_RS26375 -1.2 -1.3 ATPase AAA compare
BPHYT_RS07130 -1.2 -1.1 biopolymer transporter ExbD compare
BPHYT_RS08170 -1.2 -1.4 pilus assembly protein CpaB compare
BPHYT_RS09895 -1.1 -0.9 LysR family transcriptional regulator compare
BPHYT_RS12485 -1.1 -3.2 peptidyl-prolyl cis-trans isomerase compare
BPHYT_RS11680 -1.1 -0.9 protein-L-isoaspartate O-methyltransferase compare
BPHYT_RS25615 -1.1 -2.7 alkyl hydroperoxide reductase compare
BPHYT_RS16515 -1.1 -1.8 2-hydroxyacid dehydrogenase compare
BPHYT_RS07275 -1.1 -2.5 kynureninase compare
BPHYT_RS08355 -1.1 -0.8 hypothetical protein compare
BPHYT_RS33805 -1.1 -0.6 hypothetical protein compare
BPHYT_RS08595 -1.1 -1.7 multidrug transporter compare
BPHYT_RS12225 -1.1 -2.3 carnitine dehydratase compare
BPHYT_RS17395 -1.1 -1.2 anthranilate synthase subunit II compare
BPHYT_RS08975 -1.1 -2.3 molybdenum cofactor biosynthesis protein MoaE compare
BPHYT_RS29185 -1.1 -0.8 sugar ABC transporter permease compare
BPHYT_RS29745 -1.1 -1.3 phosphonopyruvate decarboxylase compare
BPHYT_RS32280 -1.1 -1.1 membrane protein compare
BPHYT_RS03655 -1.1 -0.8 membrane protein compare
BPHYT_RS21595 -1.1 -1.8 TetR family transcriptional regulator compare
BPHYT_RS16160 -1.1 -3.3 purine permease compare
BPHYT_RS05285 -1.1 -0.7 hypothetical protein compare
BPHYT_RS35655 -1.1 -1.5 hypothetical protein compare
BPHYT_RS22990 -1.1 -2.1 nucleobase:cation symporter compare
BPHYT_RS13055 -1.1 -1.6 short-chain dehydrogenase compare
BPHYT_RS12820 -1.1 -2.0 D-alanyl-D-alanine carboxypeptidase compare
BPHYT_RS35570 -1.1 -3.1 hypothetical protein compare
BPHYT_RS20065 -1.1 -1.3 hypothetical protein compare
BPHYT_RS07675 -1.1 -0.9 ABC transporter for L-Arginine, permease component 2 (from data) compare
BPHYT_RS08420 -1.1 -1.1 histidine kinase compare
BPHYT_RS31805 -1.1 -2.2 beta-lactamase compare
BPHYT_RS26310 -1.1 -1.1 ribonuclease R compare
BPHYT_RS09970 -1.1 -1.5 glutathione S-transferase compare
BPHYT_RS17760 -1.1 -4.3 ABC transporter permease compare


Specific Phenotypes

None in this experiment

For Burkholderia phytofirmans PsJN in phage experiments